Basic Information

Gene Symbol
Kdm5a
Assembly
GCA_018230445.1
Location
DWAN01016461.1:1-4658[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.9e-10 1.4e-06 29.2 0.0 45 89 1 42 1 42 0.89

Sequence Information

Coding Sequence
GGTTTCGAAGTATGTTCAGCAGAAAGAAAATGGTCGAAAATAGCGCGTCGTATGGGCCATCCTCAAGGAAAGGGGATAGGTTCCATCCTCAAGAACCACTACGAGCGCATCCTCTATCCGTACGATGTGTTCAAAAACAACGGCAGTATGGGTGCATCTGCGGATAGTAAGGAGACGAAAATCGAAGTGAAAACGGAACAAACACCCGAGAAAGCGGGTCGTAGGTCAAGTAAACCACCAGCGGCAACTCCGCCCCCGCCACGCCGGTACAAGAGCTCGGAGCCCGAGCCCGCTGAAGGCAGCCACACTGAGGGCGCTCTGCCCTCTGTTGATGATAAGAAAACACCCATTAAGGAGGAGCCGGGCGAGACTAGACGTAGTCCTCGTGAAAACAAGTGGATGTCCCAGCCGGGCAGCTGCGGCGCGCGCGCCCGCGTGCTGCGCTCCACGCGCCTGCGCGAGCACCGCCTCAGCAACATGACGGTGTCGGTGacgcccgcgccgccgccgctgCACCCTGACGATCCGGTACTATACTTGCCGCATGTTACAGAGTAA
Protein Sequence
GFEVCSAERKWSKIARRMGHPQGKGIGSILKNHYERILYPYDVFKNNGSMGASADSKETKIEVKTEQTPEKAGRRSSKPPAATPPPPRRYKSSEPEPAEGSHTEGALPSVDDKKTPIKEEPGETRRSPRENKWMSQPGSCGARARVLRSTRLREHRLSNMTVSVTPAPPPLHPDDPVLYLPHVTE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-