Basic Information

Gene Symbol
osa
Assembly
GCA_018230445.1
Location
DWAN01002341.1:4559-14991[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.2e-26 7.7e-23 81.3 0.0 2 89 248 332 247 332 0.94

Sequence Information

Coding Sequence
ATGGCCGGCGTGCACCGGCGGAGGTGGGAAAGTACGCAGAACGTACCGATGCCACCGCGACCGTCGTCGTCCCTGTCGGACGGCAGCGGGCCGACGGCGCGGGCGGGCGCAGGGAGCGGGCCTCCGCCGTCCGCGGCGCCGCCGCCGGGTGCCATGCTCCAGCAGCCCTACCACCACGGATCGTACAAGCCGGCGCCGTACCCGCCGCAGCCTTACCCCTACCCGCCGCGCAACCACCATCCCTACCCCTATGGCGGGTACCGGCCCACGCCGCCGCCACATCCATCTCAACATTATCCACCGCTcaagCAAGCCGGCCGCCACATGGGCCCGCCGGGCGACTCCATGCCGCCGCCCACGGCGCCCGGCGAGCACGACAACGGGCCCGCCGCGCCCGCCACGGCGCTCGTGACCACGGGGCCCGACGGCGCGCCGCTGGACGAGGGCAGCCAGCAGAGCACGCTCAGCAACGCGTCGGCCGCGTCGGGCGAGGAGCCCTGCGGCGCGGGCCCCGGCACGCCCAAGAGCCGCAAGGAGTACGGCGCGGGCAGCGCGGCGCCCTCGCCCTCGCCCGGCGGCGCCTCGCACTCCTCCGCGCACGACGACTACGACGCCGCGCCCTCGCCCTGGCCGCGCCCGCCCTCCAGCCCCGTGTTTAACAGTCACATAGCGCCGGAGTCCTACAGATCAAAGAAGTCGGACTCGCTGGGCAAGCTGTACGAGATGGACGACGCGCCGGAGCGCCGCGGCTGGGTGGAGCGCCTGCTGGCCTTCATGGAGGAGCGCCGCACGCCCATCGCCGCCTGCCCCACCATCTCCAAGCAGCCCCTGGACCTCTACCGCCTCTACCTGCTGGTGCGGGACCGCGGCGGCTTCGTGGAGgtgaCGAAAAACAAAACGTGGAAGGACATAGCGGGTCTCCTAGGTATCGGCGCGTCCTCGTCGGCCGCGTACACTTTAAGGAAACATTACACGAAGAATTTGCTCGCGTATGAGTGTCACTTTGACCGCGGCGGAATCGATCCCCAACCTATTATAAACCAAGTTGAAGCGTCCACTAAGAAGAAAAGCGGCAAATCCAATAATACGGCGAGTGCAGGGTCATCGAATTCTCAGGAGCAGTTCGGCGGCAGCGGCGCGGGGCAGGCCGCGCCCATGGACGGCTACCCCGCGCACTACGCGCCCTACCCGCCACAGCCCGCGCAGCCACAAGGCGGCGGGCCGGGCGGCGACATGGCCGCCTCCAATCCCTTCGACGAGCCGCCGGGGCCCAGGCGACCCCCAGGTTACCAGCAAGGTTATGGGTATGAATATGGATCTCCTTATCCTTCGAATAGGCCTGTTTACCCACCTTACGGACCAGAAGGGGACAGGTGtgtaattagttaa
Protein Sequence
MAGVHRRRWESTQNVPMPPRPSSSLSDGSGPTARAGAGSGPPPSAAPPPGAMLQQPYHHGSYKPAPYPPQPYPYPPRNHHPYPYGGYRPTPPPHPSQHYPPLKQAGRHMGPPGDSMPPPTAPGEHDNGPAAPATALVTTGPDGAPLDEGSQQSTLSNASAASGEEPCGAGPGTPKSRKEYGAGSAAPSPSPGGASHSSAHDDYDAAPSPWPRPPSSPVFNSHIAPESYRSKKSDSLGKLYEMDDAPERRGWVERLLAFMEERRTPIAACPTISKQPLDLYRLYLLVRDRGGFVEVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAYECHFDRGGIDPQPIINQVEASTKKKSGKSNNTASAGSSNSQEQFGGSGAGQAAPMDGYPAHYAPYPPQPAQPQGGGPGGDMAASNPFDEPPGPRRPPGYQQGYGYEYGSPYPSNRPVYPPYGPEGDRCVIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00642124;
90% Identity
-
80% Identity
-