Basic Information

Insect: Heliconius hermathena
Gene Symbol: -
Assembly: GCA_013403705.1
Location: JAAIXJ010000041.1:292485-308432[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2.5 1.7e+02 3.1 3.4 1 23 268 290 268 290 0.96

2 14 3.9 2.7e+02 2.5 1.2 1 19 340 358 340 361 0.84

3 14 0.79 56 4.7 0.0 2 23 380 402 380 402 0.92

4 14 3.1 2.2e+02 2.8 2.0 1 19 439 457 439 458 0.91

5 14 8.9 6.2e+02 1.4 1.8 1 23 465 487 465 487 0.79

6 14 7.6 5.4e+02 1.6 4.6 1 23 1849 1871 1849 1871 0.90

7 14 4.4 3.1e+02 2.3 0.6 1 23 1922 1943 1922 1947 0.71

8 14 0.042 3 8.7 3.6 5 23 1987 2005 1984 2005 0.93

9 14 0.017 1.2 9.9 0.3 2 23 2021 2042 2020 2042 0.96

10 14 3.4e-07 2.4e-05 24.7 2.0 1 23 2048 2070 2048 2070 0.99

11 14 0.00021 0.015 15.9 1.8 2 23 2076 2097 2075 2097 0.95

12 14 0.00011 0.0075 16.9 1.0 2 22 2104 2124 2103 2124 0.94

13 14 4.6 3.2e+02 2.3 0.0 1 20 2129 2148 2129 2148 0.82

14 14 0.00011 0.0077 16.8 0.2 3 23 2161 2182 2160 2182 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2.5	1.7e+02	3.1	3.4	1	23	268	290	268	290	0.96
2	14	3.9	2.7e+02	2.5	1.2	1	19	340	358	340	361	0.84
3	14	0.79	56	4.7	0.0	2	23	380	402	380	402	0.92
4	14	3.1	2.2e+02	2.8	2.0	1	19	439	457	439	458	0.91
5	14	8.9	6.2e+02	1.4	1.8	1	23	465	487	465	487	0.79
6	14	7.6	5.4e+02	1.6	4.6	1	23	1849	1871	1849	1871	0.90
7	14	4.4	3.1e+02	2.3	0.6	1	23	1922	1943	1922	1947	0.71
8	14	0.042	3	8.7	3.6	5	23	1987	2005	1984	2005	0.93
9	14	0.017	1.2	9.9	0.3	2	23	2021	2042	2020	2042	0.96
10	14	3.4e-07	2.4e-05	24.7	2.0	1	23	2048	2070	2048	2070	0.99
11	14	0.00021	0.015	15.9	1.8	2	23	2076	2097	2075	2097	0.95
12	14	0.00011	0.0075	16.9	1.0	2	22	2104	2124	2103	2124	0.94
13	14	4.6	3.2e+02	2.3	0.0	1	20	2129	2148	2129	2148	0.82
14	14	0.00011	0.0077	16.8	0.2	3	23	2161	2182	2160	2182	0.95

Sequence Information

Coding Sequence: atggataaaaataataagaaacgaAATAGAAAATCTAAATTAGTGCCGCGCAAGTATTCAGATTCGGATGATGAGAATATTGCTCTTATGCAGcaAGAGATTGAACTTGAGCTGGCAAACATAAAAGCTCAGTCAATACTAAAGAAACTGAGTGCGAGTAGTTTGAACAATGAAaaagattttcaattttcagtCAAAGTTGAAATTGAGAattgtgatgatgatgatgaaaattATGATGAGCAGAATTCATTGCCAAATGAAGAGAAaggcacaaaaaaaaatgattattcagtagttaatgattttatttctattaagacaGAGAAATCTGATGCAGTAGCAGGTACAAATAAACAGAAAGAAACAGAAGATGAAGATTGCTCTATACAAAAAGGAGAAGGAGTAGATATTTCAGATGTTGAAGAGAGTTCGTTgataaaaaatgaaagaaaaactaTTGGTTCTGATCATGATGATGATAATGGTGAACTGCTCACTCCGATAAAAGAATCTGATTTTAGAGTAGAATCGGTTAGATCGGTTAGAAATAAATCTACCAAAACGATACTTACCTACAGAATACCAGACAAAATGATTCGcgatgaatttgaatttgtttgTAAACAAACAACTCATTACGCTGACAAATTATTAGAAATGCGCCTACGGAATTATTATGCTAAGGATATGAGAGGTGTTTTGAATAACTGCGTAATAGATTTAGGTATCCAAGAAGCTTTAAAGAGATGGAAAATGTGGCAGTTTGCCTTTCCTACAGTTCGTGGGCCGCCATTAATGTATATATGCAGCAAATGCAAGTTGGGATTTTGGCATTTGCATGACTTTCGGGAACACCTCCAAGACCATACGGACATAAATTTCTCGTTTGTTAGCGAAGAACATTTGAGCTATGTTATAGGCCATCTTGGCAAAAAAGCGGATAAGCAGTTCTTGAGTGTAGATTCGGACTGCTGGAGATGCGGCAAAGGATTTAAATGCCACTGCGATGTTATATTCAAATGCAACAGTTGTAACCGTTACTTCGAAACCTGCCTACTAATGTCTATACATGAGGGCACTTGCgaagaacacaaaaataagtTTGTCCAATCGGAGAATATGGATATGCAACGTAAATGCCCTGTCTGTCCATACAAATATTGGAGGGAAGAGGATATACAAAGACACTTGATAGGTCTACACACGGTTAGAAATGATGTTCCGATATTCTGGTCCACTAAGAAATGTAGGAAATGCGATCAGATTGTCAATCAATCTATTTTGCACGAGTGTAGCGAAAAATCAGCAACCCACGCATGTATGTTTTGTTCTAGAAGGTTCCaaagtaaacataatattatggttCATTACTGGATTTCGCCAAGTAATTTTGAATGCCGAATTTGCAAGAAAGTGTTGAAAAAGGAGTGCATGGAGCAAGATCACTTGTTAAGTCACTCGGAAAGTTACACTTCAGTGTATAAGTGTTTAATCTGCAAGGATGGTCTGTATTTCATGGATAAGAAGTTAGAAAACCAACATAAATATACCGCTCACAAGAGGTTGACGAGAACTGTTTTTGAAAAGGTAATCGTGCCTAAGAGCTTATTAAAGaaattggaaaataataaaaagtttatccGAAAGCAAGTTTTGGatCTACCAAATTCAGATAGTGAAATTGAAACCAATAATGCTTCAAATGTCATCAATGAGAATATTGAGTTGTTGTTACCAACTGATACTGTATGTATCACTAAATCAGGCAAAAAACGGAAAACGGAAAGTATTGCCATTAAGAACCCTCCGCCTATCCCAAATTATATTGACGATTCAACgcccattaaaaatattaagcaagAAATCgacattgaaattaataatgataCTGAAACTAAACCtagtaaaactaaaagaaaaattgaaattcCAATAGAAAATGATttggaaataaagaaaatggccgatttgattaatataaaagaagaaCCAGTAGATTTTCTAGATATTGTCGCTGTAGGAATTGAAACAGATGAAGTTAATGAAGCTAATAATGATGATATGAATTTGTTCAATGAAGTTGATAATGgattaaatttagaatttgaaGCAGAAGAAGTGGATTTTCCAATTAAATGTGAAGTAGAAGATGAACCAGATGATGAAAACAATACAATGCATACTGATTTAAGTATAAACATTGTGGAGGAAGATGATAGTAgtaaaagAactgtttacaatcacaccatTGGAGACCAACCTGGCGAACCTATGGATATCACGGATCTGCCACTACCTTTAATAAGTAATGTATTAACGGAGGCGACAGACTCTGCCGCGTCCACATCTGGCACGCAATTCGCTAAGCCACCAACAATCGCTTCTCCAAAATCGAAGGCACAGAAACAACGTGAGTACAGACAGCGTATAGCAGCATCGAGAACTCGTGCTCAGGCCATAGCTTCGAGGAAATTGGATGCTGAAAGACAGCGCAACCACAGACTACGCAAAGCTGGTAACTTGGCTCTTGTCAGTGGTTCAATAGAATCTCCTACTGCATCCTTTTGTCGTTCACTCAACGTCCAAATTGGTACTGAGCGACAGCTCACACACCAAAAACGTCGAACTTCAGAAGCAGAACCAGCCGAAATCACTGTTCAACCGGGTAAACAACAGGCAAGATCTACCTGGAACTCCAAATGGGTATCCTCGATCAtgagatttaaattaatttttctgGACAACGATTTTGGCTACGCTTGTTCGGTTTGCGACAAACTGTGGTTCAAAAATGACCTCAAACCAATCACTACGGCACAACTGGAGGTGATCTCAGAATGGTTCATCAAAGAAAAACGACGACTGTGCAAAAAAGAATATGAAATGTCTTGTAGAACTTGCAGGCGTACACTGAACAGAAAATCGATGCCGCTCTTAGCAAAAGTTAATGGATTCTCATATCCAGACCAACCACCAGGTCTACCACCGTTGGATCCCATCAGTGAACGATTGATATCGCCACGTCTGCCGTTTATGCAAGTGCGACGTCTGCGCCATGATTTCTCTTATGGGATCATAGGGCAAGTAATCAACGTACCAGTGGAAGTTCAAGAAATGGCCAAATGTTTGCCGCGCCAATTAAATGAAGATGACGTCATTAATGTTAACGTCAAGCGAAACCTTGCCTATAAATCCACTTACATCAGCGGATACATATCCAAAAGTACAATCAGTGCGTGGCTAACTGTACTGCAGAAGTCtccattatataatttgtacgaAATCAACGTGGATTTGTCGAGACTGCATCCTAATGTACTGTGTCTCGATGATATACAGGATGATCCGTCCAACCGTATAGAAAATATCTCCGCTGAAAAAACCCCGGAATCTGAGATTCTCGCTTCAAGACAACAAACCATGATGTGGAACGAAGAAGATTATTTCAATATCACCCCAAGAAATCAGGCAGCACCTCTCAATAATGTTTTTGACCATCATGCAGAAGAATTCTCGTTTCCATCAATATACTTCGGAGAGCCACGCCGACACAAGGTGGGAGCAGTAACACCTTATATGATAGCGACTAGTGAGATACGACGTCGTGACAGACGCGGAGCCACACCTCAAAAAATCTTGTATgttgcaatgaaaatattacggcTGCGCATGATCGATAGACTTTACAGCAAGTCTCGCAGTATTTCGGTCACGGAGAATGTTAGACGACGTATGTTACAGGACCCAGAATCTTTAAAAGAATTTGTCACACAAAACCTCGCATTCATGAAGATGACTCGCAAACGAGACCTCTTTGCAATAATTCGTCAACTTGGTAAGCCAACCTTCTTCCTATCTATAAGTGCTAACGAAATATACTGGATGAAACTGCTCACTATCCTTCTCAAACTGAGCAAAAAATATCCAGGAAAAACAGCAAAAGATCTTAATATTTCTGAGCGCTGTACTTTAGTGGGTGACGATCCTGTTACGTGCTGCATATATTTCTACAGGCTTGTTGGTTCCTTGATGAAAATGCTGCAATCCAAACTGACTTACAATCCGTTCGGCAAGTATTTTGTTAAAGATTACTTCCTTCATATTGAGTTCCAGCATCAAGAAAGTCCACACGCACATTTTTTATTGTGGTTGAACGACGACCCACGTGAGGCTGTGTCGGAAAATATGCCAAAAACCATCGATCTCGTGGAAAAATTAAGTTCGGTTGCTCGAGATGATGTGCCAAATAATTCTGTATACGCCAATCAGatacacaaacatacaaacacttGCACAAAGCGAGGCGAGACAACTTGCAGATATGGAATCCCGTACTGGCCTGTGCTCACGACCCGTGTTTTGGTTCCGATACCTCTATCAGATGAACGCCGCCAAAGGCTACAACAGAAGGCTAGTGAGCTACGTACGTCTCTCAGTGAACGTCAATACGCGTGCATGGATGAGTTTCTTAATGCTAATGGTTTGACTTACGATTCATACCTCGACATTCTACGTTCAACGTTGCACAGACCGACTCTGATGTTCAGACGAAACTTTGATGAACTTATGACAAACACGTTCAATCCATACCTTGCCGGCGAAGTCAACTCTAACATCGGCATTCAGTTCATTTTAGATGAGTACAGCTGCGCAGAGTATGtagtaaagtatataaataaaacaacccgTGAAATGAGTAACCTTCGTCGTGAGGTTACTACGATGATGCAAGAGCATCCCGACCGAGACTACACAAGCCAATTGAAAGCTTTAAGTATCAAACTGATTAATGCAGTTGAGATGTCAGCGCACGAAGCAGCATGGTATCTACTACGCCAACCAATGAGTGAGACAAGTTGTCAAGTTGTGTACATCCCGACGGTGTGGCCGGCAGAAAGACAATGTCGCCGCATGAGGCGTCAAAAAGTAGATCGAGAGGGTGTCGATGGAGACAGCACTGAATTTTCGACCGTAAACATAATACAGCGATATGAAAAACGACCCGCATCTTTAGAACAAGTTTATTTGGCTGAGTTCGCTTCGTGGTATGCTAACATTAATGATTTCGTTGACGAAGAAGACGACATGCATTTGGATGACGGTGAAGATTCTGAAACTGTACCTGAATCTAGAACTTCGCAAGCACCAAAAGAATATCGCAGACGACAGCTCGGACGAGTTATACGATACAGACGCTACAATattaatgaaactattaattataaacgaGAGATGGTTCTACTGTACGTACAGTTTCGCAACGAAATGTCAGAGATTGttgatcaaaataaatttttgcaattattTGACGACAACAAAGACATGATTATGGAACGCCATAGCCTATTCGAGACGAATTTAAACATTGAACATGTCATGGAGGAACTTGAAGCCGATGATAATAGTGATTTACAAGAGGAGAAGATGATGGCGAGAACCAATCCCGaaaaagtactaaaaaaatacgtagTCAACATAAGCAAATATCAAAAGTTCGGCGGCGAGAAATATATGAGAATGATACACAATGATAAACATACATACCGTTGCACGAAATGCAACTATCCATATCAGTCTTTCAAAAAGTACctcaaccatttttttttgcacAACTACAACAAAATGGCGTGCCCACAATGTCTTACGGAGTTCCCGAATGTTGAACAGCTGTCTTGCCATGTTAAtgcacatattaaatataattatgtgtgCGTACATTCGATTCATAATGAAATTACGTCAGGGAATAGTATTAGAAAGTTTCAATGCAAGATTTGTCAGGAGATTTTAGTTGTTTCCGAGTTTTTCACGCATTGGGAGAAACACTTGATGGTGCACGGGAACGAGCAAGAGCGTGTTTGCGCGGTTGATTTGAACGGGAAGCCGTTTTTGAAGGAAATGATTgattaTATACAACAACCAGAAAAACACAGATTCAAATCTAAAATTTGCATACAATGTAACAAAAAGTTTCAcagaaaaaatgattttaaaaggcACATCATACAACACCTCCTCAACGACGCCTATGTAGAACTAATGAACTATGGACATTTGAAGTGTCAGATATGTGGAGCTGGATTCCAAACTGGGGATAGATACAAACGCCATCTAAGAGACCACGCGTCTCTCCCGGTATATAAATGCGAGATGTGCGACAAAGCTTTCAGCGACTCCTCAAACTTCACCAAACACAAGAAAGTGCACAATCTGTACGTCCTAATATGTGATATTTGTGGGAAAAAGTTCCAGAATAAAAAGTGTTTGATTAAACATTTAGAATTACACGAAACGATGGAACCGATTGAGTGTGAGAAATGTGACAAAAAATTTTACTCACAATCGGCGTACAAAAAACACTTGAAAAAGAGTAACACGACCTTCAGATGTCCGATTTGTAGAATGGTGTTAAACAGTATTAAAGAGAGATGGGATCACATGTGGGAGGTACATAAAAAAAGGAACTGTCAAGCGGATTGTCCGATATGCGGCGCCAGTTTCAGGAAGAAGACTGATGTGAAGAGACACATGGGGAAGGTGCACGGTGATGAGGCACTCGCCCACTACTACGGATAG
Protein Sequence: MDKNNKKRNRKSKLVPRKYSDSDDENIALMQQEIELELANIKAQSILKKLSASSLNNEKDFQFSVKVEIENCDDDDENYDEQNSLPNEEKGTKKNDYSVVNDFISIKTEKSDAVAGTNKQKETEDEDCSIQKGEGVDISDVEESSLIKNERKTIGSDHDDDNGELLTPIKESDFRVESVRSVRNKSTKTILTYRIPDKMIRDEFEFVCKQTTHYADKLLEMRLRNYYAKDMRGVLNNCVIDLGIQEALKRWKMWQFAFPTVRGPPLMYICSKCKLGFWHLHDFREHLQDHTDINFSFVSEEHLSYVIGHLGKKADKQFLSVDSDCWRCGKGFKCHCDVIFKCNSCNRYFETCLLMSIHEGTCEEHKNKFVQSENMDMQRKCPVCPYKYWREEDIQRHLIGLHTVRNDVPIFWSTKKCRKCDQIVNQSILHECSEKSATHACMFCSRRFQSKHNIMVHYWISPSNFECRICKKVLKKECMEQDHLLSHSESYTSVYKCLICKDGLYFMDKKLENQHKYTAHKRLTRTVFEKVIVPKSLLKKLENNKKFIRKQVLDLPNSDSEIETNNASNVINENIELLLPTDTVCITKSGKKRKTESIAIKNPPPIPNYIDDSTPIKNIKQEIDIEINNDTETKPSKTKRKIEIPIENDLEIKKMADLINIKEEPVDFLDIVAVGIETDEVNEANNDDMNLFNEVDNGLNLEFEAEEVDFPIKCEVEDEPDDENNTMHTDLSINIVEEDDSSKRTVYNHTIGDQPGEPMDITDLPLPLISNVLTEATDSAASTSGTQFAKPPTIASPKSKAQKQREYRQRIAASRTRAQAIASRKLDAERQRNHRLRKAGNLALVSGSIESPTASFCRSLNVQIGTERQLTHQKRRTSEAEPAEITVQPGKQQARSTWNSKWVSSIMRFKLIFLDNDFGYACSVCDKLWFKNDLKPITTAQLEVISEWFIKEKRRLCKKEYEMSCRTCRRTLNRKSMPLLAKVNGFSYPDQPPGLPPLDPISERLISPRLPFMQVRRLRHDFSYGIIGQVINVPVEVQEMAKCLPRQLNEDDVINVNVKRNLAYKSTYISGYISKSTISAWLTVLQKSPLYNLYEINVDLSRLHPNVLCLDDIQDDPSNRIENISAEKTPESEILASRQQTMMWNEEDYFNITPRNQAAPLNNVFDHHAEEFSFPSIYFGEPRRHKVGAVTPYMIATSEIRRRDRRGATPQKILYVAMKILRLRMIDRLYSKSRSISVTENVRRRMLQDPESLKEFVTQNLAFMKMTRKRDLFAIIRQLGKPTFFLSISANEIYWMKLLTILLKLSKKYPGKTAKDLNISERCTLVGDDPVTCCIYFYRLVGSLMKMLQSKLTYNPFGKYFVKDYFLHIEFQHQESPHAHFLLWLNDDPREAVSENMPKTIDLVEKLSSVARDDVPNNSVYANQIHKHTNTCTKRGETTCRYGIPYWPVLTTRVLVPIPLSDERRQRLQQKASELRTSLSERQYACMDEFLNANGLTYDSYLDILRSTLHRPTLMFRRNFDELMTNTFNPYLAGEVNSNIGIQFILDEYSCAEYVVKYINKTTREMSNLRREVTTMMQEHPDRDYTSQLKALSIKLINAVEMSAHEAAWYLLRQPMSETSCQVVYIPTVWPAERQCRRMRRQKVDREGVDGDSTEFSTVNIIQRYEKRPASLEQVYLAEFASWYANINDFVDEEDDMHLDDGEDSETVPESRTSQAPKEYRRRQLGRVIRYRRYNINETINYKREMVLLYVQFRNEMSEIVDQNKFLQLFDDNKDMIMERHSLFETNLNIEHVMEELEADDNSDLQEEKMMARTNPEKVLKKYVVNISKYQKFGGEKYMRMIHNDKHTYRCTKCNYPYQSFKKYLNHFFLHNYNKMACPQCLTEFPNVEQLSCHVNAHIKYNYVCVHSIHNEITSGNSIRKFQCKICQEILVVSEFFTHWEKHLMVHGNEQERVCAVDLNGKPFLKEMIDYIQQPEKHRFKSKICIQCNKKFHRKNDFKRHIIQHLLNDAYVELMNYGHLKCQICGAGFQTGDRYKRHLRDHASLPVYKCEMCDKAFSDSSNFTKHKKVHNLYVLICDICGKKFQNKKCLIKHLELHETMEPIECEKCDKKFYSQSAYKKHLKKSNTTFRCPICRMVLNSIKERWDHMWEVHKKRNCQADCPICGASFRKKTDVKRHMGKVHGDEALAHYYG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -