Basic Information

Insect: Heliconius hermathena
Gene Symbol: bab2
Assembly: GCA_013403705.1
Location: JAAIXJ010000125.1:195401-234707[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.2e-07 8.2e-05 22.4 0.0 2 37 507 542 506 543 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.2e-07	8.2e-05	22.4	0.0	2	37	507	542	506	543	0.95

Sequence Information

Coding Sequence: ATGCAGGGGCTCGTGAGCGACAAGACGTTCCACTTGAAGTGGAACAACCACCTGCAGAACCTCAGCCAGCTGTTCACCACCATCTACTCGTCGTCGTCGCTGGCGGACGTCACGCTCTCCTGCCGCGATGGCACCCTCAAGGCGCACAAGCTCGTCCTCTCGGCGTGTAGCCCCTACTTCGAGCAGATATTTAAGGACAATCCTTGCCAGCATCCCATCGTGATACTGAAAGGCATACCCTTCTCCGAGATAAATCTGTTGGTGGAGTTTATGTACAAAGGCTCAGTGGATGTACAAGAACTAGATCTTCAGTCCTTAATGCACACAGCATCTGAGCTAGAGATACGAGGGTTAGCATATGAAGCTAGAGACAATGCTGCACAGCTTTTGAATGTAAATTTGGAATATCCGTCATATGGGCAAAATGCCACAACTGCTGCCGCTGCGGCTGCAACGGCCACTTCAGTTTCCACATCCCAGTCCTTTCCCCAAGCACGGACAGACGTAGAAAGATTGAAACAGATACACATGTACCAACAATCTATGATGCGTGCCGAGGAGATACGGCGACGGCGTCGTGAAGACATGCCTACCACACAGACAGCCGTCAACAATATCTTAGCAGCCGCCGCCAGGGAAATGGAGGAGGCGAGGCACGCGGCCAGGGGAGATCGAGTCTCAGTTGCCAGTATAACGACTGAGCAAGAAGcagcagcagcagcagcggcAGCAGTAGCAGCAGCTTCAGAAGTGAAACGTGAGTTAGAGGAAGAAAGGCCTAAAAAGAGGGTGTCCATAATGTCACCGGAGGATGATAAACTAAGAGCGAAGAAGAAAGCCATGACTGTACGCTTCCAAGAGGATAATAAGACTGATGAGGGCCCCGCCAAAGTCACTTCGCcggGCGCCACAAACTCAAACCACGGCAACGACAAAGACGACACTAAACCCGGCGGCATCAAGGTGGTGCAACTCGCTGTACTACAGAAGCCTACGAACAACGAGCATGACGATTCAGACGagAAAGCAAACAAACAAGGTATGGATGATGATGAAGAGACGGATTCCAGCGGTTCGATATCAGACTCCGGCGCCAACGAGTCGCAAGATGGACGTCCTCACGTGTGCGATATTTGTGATGTCAGGTTCGCGCGCTCGTCGCACCTGTCGCGGCACCGCCTCACGCACACGGGCGAGCGCCCCTTCACGTGCGGCGGCTGCGGCCGCTCCTTCGCGCGCTCCGACAAGCTGCGCGTGCACACCAAGATCTGCGAGCGGGTACAATCAAAACAAAACTTGCAGGAGGACCCCACTGTTGACATGAACAGTGATGTCACTGTTAAAAGGGAAAACAACTCCGAAGTCATGTCCGGAATGGTACGCACTACACACCGTGAATCCGGCCATCTTGTTTTCACTCCCAGTGGAGATGTCATGCTGCCGCCTCGCAATCagGAAGAAACAGATGAGGTTGAAGAGGTCCCAATTGAAAAACCCAGCATATTTAGAAAATGGTCAGACGAGACTATGAGAAAAGCAGTAGATGATGTcacgaataataaattaacagtcatggaggccagtcgtgtatACGATCTTCCATTGAAAACATTACGAAGACATATTGTTTGGTCTTCGAAAGGCGAACCGATTGTCAGTCGGGCATTAAGACTCGGGCCCGAAAGCGAGCAAAAAGTCATCGCCCACGTAAAACGGCTGAAAGCTATTAGATATCCTCTAAACAATTCACGTGTAAAgtctattatttatgaatttattgaGAAATTGAAGCTACCACACAGATTCGACAGAGATAAGAAACAAGTCGGTCGCGATTGGTTCAAAGGGTTTATGAAGAGACATCCAGATGTCAATACTAATAAGGAAGAGGATTTATCGCTCGCCAAAACCCTCGGCATCAATCGGGAGGAAATCAATAATTACTTTGAGGCGTTATTGAAATTGCTGACTGACAACGATTTTCTTCATAAACCTGACCGGATTTATAACATGATCGAAAATAGTATACCAGTTACAAGTAAAATCGGACGCTCTATACCTAGggctgtaaaaaataaagattcgaATATGGTGGAATGTGATCATGTTTCCTTGATCGCATGTTGCAACGCTCAAGGTACCTTCTTACCACCAGTTCTAATAATGAAAGGAAAAGATCCAAAGCCAGAAATATTTGAGGACCTCCCACTAGGCTCAgaagtttatataaatcaaaaatcctCGTACATTAATGCcgaattattttacaaatggaTGAAGGACCATTTTATTCCGCGAAAACCTGACGGAACAGTCCTTTTGATTTTAGATCCATATTACTCTCTTTCGTATTCGTTTGAAATGCTTGAAATAGCTGAAGAAAACGACATAATCATACTCTGCCTACCAAGTCATACCACACAAACACTAAATCCGTTGGATAAGGCGTTCTCTAAGCCTTTTAACGGTTATTTTGCAACTGAAGTGACAAATTGGTATATTAACAATGAAGGAAGTTTCTTGGATCCCTATCATATTACCAAATTGATAGCTAAATCTTGGTGTAAATTTGCTTTGCCCTTATCAAGCATTTTAGGATTTAATTCGACAGGAGTGTATCCTTACGATCCTAATACTGTTGCGGAACTTCTAAAACCGCCAGAGCAAATTCCAAACCAAACTATCCCAACTATTCAACAGAATAGTAGTAATATTGACGTGACTTGCTTAGAATGTCAAGGAACTCAAGATATTACTGAAATAAAGAATGAGTGGTTCCGATGCGCTCATTGCTCTAATTGGTTACACAAGGAATGTACTAAAAACGAAGATAAATGTAACAAATGTTGTGCCAAAAATAAAGGAATAGGAAAAAAGAGTGTGGTATTAAACTCTACCCTCGACCCGGTACGCAATGAGATCAGCCCGGGGGACCTCATCGACCCGCCGCGGAGGGGGCGCGGCCGACCGCGCAAGACGCCGCTACCGCTGACACCCAAGATCAAGAAACGGAGGGGACGACCGCCTAAGACTTCATtggACATGGAAGGATGCGTACTGACGGGCGGCGCCGTGCCGAGCGGCGCGCTGTCCGGACACCAGCTTCTGTTGAAACGCAAACGCGGACGCCCGCCGAAGAATTATTTCTTACCTTCTCAAGGCGACGGACGACCCAACGAGAACTACAACGCGACCAACCTTCCATTCGGCGATTTCTCATACTTGACGGAAATGATGTATAATCCTCTGGCGTATTCTTACGGAGTGACCAGCGTTGACCCTGACAGGAATGTAGATCCCGACCAGACCGGCACCAGCGAGGCTTCCCACGACCGGACCATAGACGTTTCAGACTCATCATCAGACGACGAGGACTCTAGAGTAGAGCCAGAAGAAAACGTACCACCTGTCGGCATAGAGACGCAAATAATGACCGTTGGGGATTGCCAAATAGTGAAATTACCTCCGAATGAGGAGAAAGACGAGCAACAGGAAACAGTAACGGCCCCAAGTTCGGTCACCATCACACCCATCACAACCGTCGGTGATTGCACCATCAGGCCTGTTGAGAACACATAA
Protein Sequence: MQGLVSDKTFHLKWNNHLQNLSQLFTTIYSSSSLADVTLSCRDGTLKAHKLVLSACSPYFEQIFKDNPCQHPIVILKGIPFSEINLLVEFMYKGSVDVQELDLQSLMHTASELEIRGLAYEARDNAAQLLNVNLEYPSYGQNATTAAAAAATATSVSTSQSFPQARTDVERLKQIHMYQQSMMRAEEIRRRRREDMPTTQTAVNNILAAAAREMEEARHAARGDRVSVASITTEQEAAAAAAAAVAAASEVKRELEEERPKKRVSIMSPEDDKLRAKKKAMTVRFQEDNKTDEGPAKVTSPGATNSNHGNDKDDTKPGGIKVVQLAVLQKPTNNEHDDSDEKANKQGMDDDEETDSSGSISDSGANESQDGRPHVCDICDVRFARSSHLSRHRLTHTGERPFTCGGCGRSFARSDKLRVHTKICERVQSKQNLQEDPTVDMNSDVTVKRENNSEVMSGMVRTTHRESGHLVFTPSGDVMLPPRNQEETDEVEEVPIEKPSIFRKWSDETMRKAVDDVTNNKLTVMEASRVYDLPLKTLRRHIVWSSKGEPIVSRALRLGPESEQKVIAHVKRLKAIRYPLNNSRVKSIIYEFIEKLKLPHRFDRDKKQVGRDWFKGFMKRHPDVNTNKEEDLSLAKTLGINREEINNYFEALLKLLTDNDFLHKPDRIYNMIENSIPVTSKIGRSIPRAVKNKDSNMVECDHVSLIACCNAQGTFLPPVLIMKGKDPKPEIFEDLPLGSEVYINQKSSYINAELFYKWMKDHFIPRKPDGTVLLILDPYYSLSYSFEMLEIAEENDIIILCLPSHTTQTLNPLDKAFSKPFNGYFATEVTNWYINNEGSFLDPYHITKLIAKSWCKFALPLSSILGFNSTGVYPYDPNTVAELLKPPEQIPNQTIPTIQQNSSNIDVTCLECQGTQDITEIKNEWFRCAHCSNWLHKECTKNEDKCNKCCAKNKGIGKKSVVLNSTLDPVRNEISPGDLIDPPRRGRGRPRKTPLPLTPKIKKRRGRPPKTSLDMEGCVLTGGAVPSGALSGHQLLLKRKRGRPPKNYFLPSQGDGRPNENYNATNLPFGDFSYLTEMMYNPLAYSYGVTSVDPDRNVDPDQTGTSEASHDRTIDVSDSSSDDEDSRVEPEENVPPVGIETQIMTVGDCQIVKLPPNEEKDEQQETVTAPSSVTITPITTVGDCTIRPVENT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00778442;
90% Identity: iTF_00778442;
80% Identity: iTF_00778442;