Hher006236.1
Basic Information
- Insect
- Heliconius hermathena
- Gene Symbol
- ttk
- Assembly
- GCA_013403705.1
- Location
- JAAIXJ010000528.1:84336-91935[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.2e-16 5.8e-13 48.5 0.0 2 42 352 393 351 396 0.94
Sequence Information
- Coding Sequence
- ATGTCTCAGCAGTATAGCCTGCGATGGAATAACCATCAGCcaaattttatatctatgttTGGTACATTATTGGCTACAAAAAACTTAGTAGATGTGACTCTAGCTGCTGAAGGTCAACATTTAGTTGCACACAAAGTGGTGTTGTCGGCATGTAGTACATACTTTCATtcacTATTTATTGACAATCCTTCACATCATCCAATAGTTATTTTGAAGGATGTTACATTTAATGATTTACGGACAATGGTAGATTTTATGTATTATGGAGAAGTAAATGTCACAGAAGAACAATTACCACAGGTATTAGAaacagcaaaaatattaaaaatcaaaggaTTAACAGAAATGCCAGATTCTACATCATTGACCAGATCTCAAGGTTCATCAGCCGACTTGCCTACTGCCGAAAATTCAAATGAAACACTCAGACCTTCAATTTCCACACCCTCACCCAATTTGAAACCAAAAAGACGCAGAATGAGTTCTACGGGCTCAGTGGGAAACTTGGGTGTGGATGACAATAGAAGCAATGACTGTGGACAAAGCATGGAATTGATGCGTGAGGCAGTCACATTAAGCAGTGTGCCACAACAGAAACGTAGGGAAATGGACGAACGGATAGACAACTCACAACagACTGGAGAATCATCAAGCATTAATATAGACCAACTTGCCATGGATGCAAATTCTGCTGTCGGTATGTCACAAGGCCAATGGAGTATGCTGGAGCATACGTACCCGCGATATACGAACGCGTGCCTGCAGCCCGACCAGGGCATGTACCTCAACAACGTGATGAACACGCACGCGCACGGACAcacgcacgcgcacgcgcactcGCACGCCGACGCGGACATGGGTGGCTACGGGCAGATGCTGGGCGGCGGTATGCCCGCGCCGGGGCCCAGCTGTGGAGGCGTGGGCGGCGGCGGGGGAGCGGGGGGAGGGGGCGTGGGCGACGCGCAGGGAGCGGGGCAGGGGGTGGGGGGAGCGGCCGGCGTGGGGGGGAGCGCGATGCAGCAGAAGCGCCGGCGTACGACGAACCCGCAGGCGGAGGAGAATTTTCAGCGCGCGCTCGAAGCGGTGCGCTTCGGCGGCATTGGATTCTGCAAGGCAGCGCGCATGTTCGGTGTCAACAATCGTACGCTCTGGCTGGAGTACAAGAAGAAGGGTTACCCTAACAACCGACCGAGCATCAAGAGTCGCATCAAGCGCGAGCACGTGACGCCGCCGCCCAAAGAGGAGGCGCCGGCGCAGGACGCACAGCTGGCGCTGCTGTGCCCGCCTCACGCGGTGCCCGTCCCGTTCCTGGACGCGCGCCCCGTTGAGTTCAACATCATCAACGGTGTGAACTTCCCGTTGCAATAG
- Protein Sequence
- MSQQYSLRWNNHQPNFISMFGTLLATKNLVDVTLAAEGQHLVAHKVVLSACSTYFHSLFIDNPSHHPIVILKDVTFNDLRTMVDFMYYGEVNVTEEQLPQVLETAKILKIKGLTEMPDSTSLTRSQGSSADLPTAENSNETLRPSISTPSPNLKPKRRRMSSTGSVGNLGVDDNRSNDCGQSMELMREAVTLSSVPQQKRREMDERIDNSQQTGESSSINIDQLAMDANSAVGMSQGQWSMLEHTYPRYTNACLQPDQGMYLNNVMNTHAHGHTHAHAHSHADADMGGYGQMLGGGMPAPGPSCGGVGGGGGAGGGGVGDAQGAGQGVGGAAGVGGSAMQQKRRRTTNPQAEENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNRPSIKSRIKREHVTPPPKEEAPAQDAQLALLCPPHAVPVPFLDARPVEFNIINGVNFPLQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00774591;
- 90% Identity
- iTF_00778104;
- 80% Identity
- iTF_00778104;