Hher015973.1
Basic Information
- Insect
- Heliconius hermathena
- Gene Symbol
- Mblk-1
- Assembly
- GCA_013403705.1
- Location
- JAAIXJ010000012.1:491544-527167[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-14 1.4e-11 44.1 0.0 1 39 283 322 283 327 0.93 2 2 1.5e-18 1e-15 57.3 0.0 1 43 491 534 491 536 0.95
Sequence Information
- Coding Sequence
- ATGCTGGCTTGTCTAAACCAAGCTTTAGAACGGCCAGCGGTAGCGACCCCCCGGTCCGCATACAGCCCGTCTGAACGTACGCCTTTTTCTTCTGCAAGGGGACCGCAAGGGGTCACAGTACGCCGGTGCTCCACGGTAGTCTATATGCGATCGGTTAAACAGCATAGGCCGGACAGAAAAGCCTATAGGGGCGGTCCGCAGGGGGTGGAAACCTCGGAAAATTCACGTGCTAGACCCACCCCTTGGCAAAACACGTGCGGCCAAATAGCCTCAGTATACGAACGCCTTTGCTTATCATTGCCAACAGCTGCTCCCTTGCCGTTGCCAttatttgatgaaaaaaaaaactacataattTACTCGCCAAATGGTGGGGTTCTAATTCTAAACTCGTGTTCGACCAATCGCGAGCGAGGATCCGCAAACATGGCGTCGTGGGAACCGAGTCCAGCATCGGAATCAGACAGCAGCTCGGTGTCGGGCGCAAAGAGCCCCGCGGGGCCGCCGCTGTTGCAGCACCTACTGCAGCTGCAGCTACAGGGGCAGAACCCGCAGGCGATCGCACAGTTCCAGCAGATGATCGCGGCTCTTGCGGCTCTCGGCACCGGCCTACTACCGCCCGCGTGGATGATGCGACCGAGGCAGGTTGATAGCAGGCTACCCGAAGACAAGGTAGCTGCGCCCAGCTCATCACCAACGATCGCGGAACAGCCCTTGGACCTCAGCGCGAAATCCACATCTAGCACCAGCGGCACTCCACCTCCTGACACGAAAAACGTGGATAATGCTAGATTAAAACGAGCAGTCCTCGAAGGCTCCAGCAACAGTGCTACAAGACGAGCTTACACCGAAGATGAACTGCGATCTGCTCTGCAGGATATCCAATCTGGGAGATTGGGAACTCGTCGGGCCGCCGTTGTCTACGGCATACCTCGCTCCACTCTTCGCAACAAGGTCAACAAGTTTGGTCTTATGTCGGATACTGGCCAGGAATCAGATCCGGATAGTGAACCCGATAAAGCAGAATCGCCGCCATCCGTTATCCTCAAAATACCGACTTTCCCACCTCCAGATGAAAAAAGTCCTTCGCCAGCAACGTCCATCACTACCCCAGTTACACCTATCACCCCGCTCCTACCACCTCAGCCACCTCTCAACCCGCCATCCCAACTTTTACTCCCACCATCAGTTTTTGCAGATCCACCTTCCTCTCAGCACCTTTTTACATCACTGAGTGATGTCATAGCAAAAAGCATCAGCCAAAAGTTCCAACAGCCACTAGATAGACCACAACCATCGGACCTGCAGTACATGCGAGCACCTGATAGACATGTATCCGTAATTAAAACTCCTCCAGACAATCAGAGAAATTACGCGATGCCCAGCAACTCAAAAGCTACGCCTAATAACGGACAACCGGCCGCCGGCGGAAAAGGCACTAGGCCCAAACGTGGAAAATACAGAAACTACGACAGAGATAGTTTAGTGGAAGCAGTGAAAGCGGTCCAGCGCGGTGAGATGTCCGTCCATCGCGCGGGCTCATACTACGGAGTGCCGCATTCGACGCTAGAGTACAAAGTAAAGGAGAGGCATCTGATGCGGCCGCGAAAACGAGAGCCGAAACCCCAACAGGAAGTGAAGCCTCAACCTCCGAAACCTCCACCGAAACCTCCCACAAAGTTCACCAACGGGTTGAACGGGCCGGACAGCTACCCCAACTACCCGTTCTGGCCGGGAGGGTTCGCGCCGCCGGCCCCCGACCTGTACGCGTCGCACATGATGAGGCGCCTGCGCGAGGAAGCGCCCCCGCCCGCCAACGGGTCCTTCCTGGAGGGCATCATCCGCTCGAGCCTGGAGCGGCCGGCCGCGCTGATGCAGCGGCTGGCGGCGCCGCCCTCGCCGCCCGGGGCGCCCGGGGCGCCGGGCGCGctgcggcgcggcggcggcgcggcgggcgACGAGCCGgccgcgcgccgcccgcgcctcGACTCCGACCACCAGCTCGCGGCCGACATGCGCGAGGCCGTGCAGCGCCTGCGCCAGGACAAGGCGCGCCCGCGCAACGGCACGCCCACGCCGCCGCCCGCCGAGCCCGCGCACCCCCACGCCCACGCCCACCCCGGCCCCGCCTAG
- Protein Sequence
- MLACLNQALERPAVATPRSAYSPSERTPFSSARGPQGVTVRRCSTVVYMRSVKQHRPDRKAYRGGPQGVETSENSRARPTPWQNTCGQIASVYERLCLSLPTAAPLPLPLFDEKKNYIIYSPNGGVLILNSCSTNRERGSANMASWEPSPASESDSSSVSGAKSPAGPPLLQHLLQLQLQGQNPQAIAQFQQMIAALAALGTGLLPPAWMMRPRQVDSRLPEDKVAAPSSSPTIAEQPLDLSAKSTSSTSGTPPPDTKNVDNARLKRAVLEGSSNSATRRAYTEDELRSALQDIQSGRLGTRRAAVVYGIPRSTLRNKVNKFGLMSDTGQESDPDSEPDKAESPPSVILKIPTFPPPDEKSPSPATSITTPVTPITPLLPPQPPLNPPSQLLLPPSVFADPPSSQHLFTSLSDVIAKSISQKFQQPLDRPQPSDLQYMRAPDRHVSVIKTPPDNQRNYAMPSNSKATPNNGQPAAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQQEVKPQPPKPPPKPPTKFTNGLNGPDSYPNYPFWPGGFAPPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPAALMQRLAAPPSPPGAPGAPGALRRGGGAAGDEPAARRPRLDSDHQLAADMREAVQRLRQDKARPRNGTPTPPPAEPAHPHAHAHPGPA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00212348;
- 90% Identity
- -
- 80% Identity
- -