Hher019283.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Heliconius hermathena
Gene Symbol
ct
Assembly
GCA_013403705.1
Location
JAAIXJ010001743.1:73735-77318[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.8e-32 1.9e-28 98.4 0.0 4 77 317 391 315 393 0.96
2 2 5.1e-31 3.5e-27 94.4 0.0 3 75 514 587 512 591 0.95

Sequence Information

Coding Sequence
ATGACTTCTATTTCGGTTGGAACAAAAGATGGTACCGCTGGCCCTGGTTTTGGCAGACCAGAAGGAGAAGGTGATGAGCGGATTGCGCATATGCTAAATGAAGCTCACATGATTAAGTCACAAGTGAACAATGATGACTCAAGGAGTAACGAGGACTCTAGCTCACCAAGAACACAGTGCCCTTCACCATTTTCTAATAAGgATTCAATGCAATTAAGAAGGCTGAAGAAATATGAAAACGATGACATTCCCCAAGAGAAAGTGGTTCGAATATATCAAGAAGAACTCGCCAAAATCATGACTAGGAGAGTTGAAGATATGCGACACAATCGAGATGGCTTCCCTGGCATGTTTCCTCCATTTTTCAGTGGCGGTATGCCTCATATGGAGCGACCTCCTGAAGATGTCCGCATGGCGTTGGAAGCGTACCACCGGGAACTTGCCAAAATTCAACCCGGAGGCAATATTCCAAACCTGCACAATTTGCCAGGAATGCCTCCCTTCACGAACCTCCTCGCCCTACAGCAGCAGGCCATGCAAAACCAGCACATGAATGGTTCTGGGGCAATCCAAGATCTGTCCCTGCCAAaggaaaaaaaacctaaaatgaACGGAATGACTGATAGTGATAAGGATAGATCAATGGATGCCGAAGAAGCTATACGACACGCGGGTAGCGCGTTCTCGTTAGTAAGACCAAAGTTAGAGCCAGGACAGTCGACAGGATCGTCGGCGTCGAGCCCGTTGGGTAATGCTATATTACCCCCTGCAATCACACCCAATGAAGACTTCAGTAATTCTGCGGTAGCGAGCCCTTTACAAAGGATGGCGTCGATTACAAACAGCCTGATTTCTCAGCCTCCCAATCCTCCCCACCATACACCTCCACAGAGGTCAATGAAAGCTGTTCTTCCACCCATCACACAACAACAATTCGATTTGTTCAACAACTTGAATACAGAAGATATTGTTAAAAGGGTGAAAGAAGCGCTAAGCCAATATTCTATAAGTCAAAGGTTATTTGGAGAATCCGTTTTAGGATTATCACAGGGCTCCGTAAGCGACCTCCTAGCAAGGCCGAAGCCCTGGCACATGCTCACACAAAAGGGAAGGGAGCCTTTTATTAGAATGAAAATGTTCTTGGAAGACGACAATGCTGTCCATAAACTAGTCGCGTCGCAATACAAAATTGCACCCGAAAAACTGATGAGGACCGGAAATTATAGCGGAGCACCTATTTGTCCGCCCAACATGAATAAGCCCATGCCGCCCACACAGAAGATGATCTCCGACGCGACGTCCCTGCTCAGCAAGATGCAGCACGAGCAGCTGCTGGGCGCGGGCCCGCTGCACCTGCAGCCGGCGCCGCTGCTGCTGACGCCGCCCGGCTTCCCGCCGCACCACGCCGTCACGCTGCCGCCGCAGCACCACGACAACAGCAAGGAGCGGAAACAGCCCCCCGCGCCGCACCACCAGCCCCCCCTGCCGCGCCTGCACCAGCACATGTCGCCCAGCGTCTACGAGATGGCCGCGCTCACGCAGGACCTCGACACGCAGACCATCACCACCAAGATTAAAGAGGCGCTCCTGGCGAATAATATCggtcaaaaaatatttggcgAGGCGGTCCTCGGCCTCTCCCAGGGCTCTGTCAGCGAATTACTTTCGAAGCCGAAACCGTGGCACATGCTCAGCATCAAGGGGAGGGAGCCCTTCATTCGCATGCAGCTGTGGCTCAGTGACGCGCACAACATCGATCGCCTGCAGACGCTCAAGAACGAGCGGCGTGAGGCCAACAAGAGACGACGCTCCAGTGGTCTCGGACAGGACAACTCCTCCGACACTTCTTCCAACGACACCTCGGAGTTCTACCACTCCAGCTCCCCGGGACCAGCCTCCGGCGCACCCTCTGCCAAGAAGCAAAGAGTTCTATTCTCGGAGGAGCAAAAGGAGGCGTTGCGGCTTGCCTTCGCACTAGACCCATATCCTAACATGCCCACGATAGAGTTTCTGGCGGCGGAGCTCGGTCTCTCCACCAGGACTATCACTAACTGGTTCCACAATCACCGAATGCGCCTCAAGCAGCAAGCGCCGCACGGTGCGGGCGGGGAGCCCCCCGCGCGCGACCAGGCCGCCGCCCCCTTCGACCCCGTGCAGTTCCGCCTGCTCCTCAACCAGCGCCTGCTCGAGCTGCAGAAGGAGCGCATGGGGCTCGCCGGCGTGCCGCTCCCGTACCCACCCTACTTCGCCGCAAACTCGAACTTTGCGGCGCTCATCGGCCGCGGCCTGCTGCCGCCCGACGACGCCAAGGACCCCGTGACCGGGCTGGACCTGTCGATGCCGCTGAAGCGGGACCCCGACGGCGAGGAGTACGAGGACGAGGACGCGGAGAGCAACCTGGGCTCCGACGAGTACGACGACGAGTCCAAGCTGGAGCCCAAGGCGGCGTCCACGCCCGCCGGCGCGCGCTCGCGCCGCAAGCCCGCCGCGCCGCAGTGGGTCAACCCCGAGTGGCAGGACGCCGCGCGCGACGAGGTGCTCATCAACGGCGTGTGCGTCATGCGCGCCGCCGACCTGCGCCGCGAGCCCGCGCCCGTGCGCcccgcgccgcccgcgccgcccgccgtcAAGGCGGAGGCCGACGCCGACGACGAGCGGTGGGACTACTGA
Protein Sequence
MTSISVGTKDGTAGPGFGRPEGEGDERIAHMLNEAHMIKSQVNNDDSRSNEDSSSPRTQCPSPFSNKDSMQLRRLKKYENDDIPQEKVVRIYQEELAKIMTRRVEDMRHNRDGFPGMFPPFFSGGMPHMERPPEDVRMALEAYHRELAKIQPGGNIPNLHNLPGMPPFTNLLALQQQAMQNQHMNGSGAIQDLSLPKEKKPKMNGMTDSDKDRSMDAEEAIRHAGSAFSLVRPKLEPGQSTGSSASSPLGNAILPPAITPNEDFSNSAVASPLQRMASITNSLISQPPNPPHHTPPQRSMKAVLPPITQQQFDLFNNLNTEDIVKRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGNYSGAPICPPNMNKPMPPTQKMISDATSLLSKMQHEQLLGAGPLHLQPAPLLLTPPGFPPHHAVTLPPQHHDNSKERKQPPAPHHQPPLPRLHQHMSPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNIDRLQTLKNERREANKRRRSSGLGQDNSSDTSSNDTSEFYHSSSPGPASGAPSAKKQRVLFSEEQKEALRLAFALDPYPNMPTIEFLAAELGLSTRTITNWFHNHRMRLKQQAPHGAGGEPPARDQAAAPFDPVQFRLLLNQRLLELQKERMGLAGVPLPYPPYFAANSNFAALIGRGLLPPDDAKDPVTGLDLSMPLKRDPDGEEYEDEDAESNLGSDEYDDESKLEPKAASTPAGARSRRKPAAPQWVNPEWQDAARDEVLINGVCVMRAADLRREPAPVRPAPPAPPAVKAEADADDERWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00947788;
90% Identity
iTF_00457903;
80% Identity
iTF_00777890;