Hera005273.1
Basic Information
- Insect
- Heliconius erato
- Gene Symbol
- stc
- Assembly
- None
- Location
- Hel:1900207-1910269[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 2 1.4e+04 -4.1 1.6 15 19 449 453 448 453 0.81 2 11 0.058 4.1e+02 0.8 1.7 2 10 481 489 481 489 0.92 3 11 3.2e-05 0.23 11.2 18.1 4 19 497 512 495 512 0.93 4 11 1.8e-07 0.0013 18.4 15.2 1 18 548 565 548 566 0.99 5 11 0.83 5.9e+03 -2.9 0.3 8 11 571 574 570 574 0.86 6 11 6e-05 0.42 10.3 12.3 1 19 607 625 607 625 0.99 7 11 0.0069 49 3.8 3.0 1 12 666 681 666 681 0.81 8 11 2 1.4e+04 -5.0 1.3 6 10 758 762 757 762 0.61 9 11 0.00025 1.8 8.4 9.2 9 18 775 784 773 785 0.92 10 11 1e-07 0.00073 19.2 14.0 1 17 821 839 821 845 0.83 11 11 0.00026 1.8 8.3 6.9 1 13 851 862 851 863 0.95
Sequence Information
- Coding Sequence
- ATGTCTCAGTGGAACAACTCATACAACTACAATAATCAATATCAACCTCCTAATAATTGGAATGGTGAATATAATAATCAATATGCAAACCAATCATACTATCCTAATAGGCAATATGACCACAGCAATCAGTATGTTAGCTTTGATGAATTTTTATCTCAAATGCATATCTCAAANGTTCCTCAATCAAATCACGCTAACTACAATAATATACAATATCAAAACTATCCCAATACTCAATTTAACAATGTACCTAGTTATCATAATGGAGCTACAGCTCAGAGTTCTCAGTCAGATTATATGTATGCATCGAACACTGCCAATTTTCCCAATAATGAAGAGTCCTACCAACCTAGTACACAAAATCAATATAATATTAACCCAGTAAACTCAAATGAAAACAATTATACTAATGAAGTAGTTTTTAAATCAAAATTAACACCAACTGCAACTGAGCCCCAAAGTTCCCAACAAGGTAGCACTTCATCTTTTGTAGAGAACAATTCATTTCAAAAACCTAGACCTCAAGATTTGAATAGNAGAAATAGNGAATCAAAATATGAATCTAAGAATCGTAATCAAGAATATCCTAATAGCCATAATGACTCAGTTANTTATAGCTCTAACTCTAAGAACAACAAAGACTCTACAAACCGTCCCAATGAATCACACCGTATGCGTAACCGTAAATCCAAAAACCGTTCTGCTGACAACAATCATGATGGAATCCATAGAAACCATGATAATGTAGAGCACGGTAATAACCACAGNTATCGTAATAACGACTCNAACACATACAATCAAGAAGCTACAGGCTATCAGGATGAACCAAACCATGTCCAAGAGACTAATAACTTTGAAGGGGGCCAATCTAAACATTCTAAGGCTAAAAATAAAGAGTCTGATGTAGGGCGTACTTTTTATAATAGCTCTATGCCTAAAGAAAGTCAAGACGTAAGAAATGGGAGGGAGAGTCATGGAAAGGGTCGCAAATGGGCCGGAAGTCAACGAGTTAGACCTGTGGAACGTAGCTATGTTGAAGACGAACAATATGCTAATTCGTATTTGCAATATAGAGAAGATAGGAATAGAGATAATGTACCTAATAGTCCTATGAAAGGAAGACACAAATCGTCTATGGTGTCAGCTTCAGCGAATACAGATATGACACAGCGAGAACGTCTCAGTGAGCAATTGGACAAAGGGACTCTAGAATGTCTTGTATGCTGTGAGAGAGTGAAGCAGATAGACCCAGTGTGGTACTGCGGCAACTGTTATCATGTGTTCCATTTAAGTTGTACTAGAAAATGGGCTATGAGTAGCATGGTTGAAAGCAAATGGCGCTGTCCAGCCTGTCAAAATACAAACCAAGCTGTACCAACAGAGTACAGGTGCATGTGTGGAACAGTCCGCAACCCAGAGTACCAGAGGGGCTCCAGCGGTGCCCACACTTGTGGCAAATCTTGCAAGAGACCCAGAAACTGTCCCCACCCNTGTACACTGCTTTGTCACCCTGGCCCTTGTCCTCCTTGCCAGGCCACTGTTAGCAAGCAATGCGGGTGCGGTGCTGAAACACGCTCAGTGCTCTGCAGCAGCAAGTTACCACAGGTGTGTGGAAGGGAGTGCCGCAAGAAACTTGAATGTGGTGTACATTCTTGCACTAAGGACTGTCATGAGGGACCTTGTGATCCTTGCGGAGAGACTGTTACTCAAGTATGCCACTGCCCAGCAGCCAGCGCCCGCTCCGTGCCGTGCACGTCGCAGACGGGCGGCGCGCCGGCGTGGTCGTGCGGCGCGGAGTGCGCGCGCGTGCTGGCGTGCGGCGCGCACGTGTGCCGCAGCGCGTGCCACGCGCCGCCCTGCGCGCCGTGCCCGCTGCGGCCCGACAACGTGAGGAGCTGTCCCTGTGGTGGCACTAGAATTCATAAGGATCAACGGAAGTCATGTACAGACCCGATACCGCTGTGTGGTAACATTTGCACCAAGCCTTTGCCCTGCGGTCCTCCGGGAGACAAACATTTTTGTAAGGAAAGCTGTCATGATGAAGTTATCCTGCGGCCGTCACCGCTGTCGTACAGCGTGCTGTGCAGCCACGTCCCACCGCTGCACAGTTGTGTGCGGTCGCACGTTATCCTGTCAATTGCACAGATGCGAGGAGTTCTGCCATACTGGGCATTGTGCACCATGTCCCAGAGTTTCGAAGAGCTCCGTTGTGAGTGTGGTACTGAGGTCATCCTGCCCCCCGTCCGCTGCGGCACTAAACCACCGCCCTGCAGCGCCCCCTGCCGCCGCCGCCGCGCCTGCGACCACCCCCCGCACCACGCGTGCCACTCCGGGGACTGCCCGCCGTGCGTCGTGCTCACCACCAAACGGTGCTACGGTGACCACGAGGAACGTAAAACAATACCATGTTCTCAAGAGCAGTTTTCATGTGGTCTACCTTGTGGAAAGCCGCTGCCTTGCGGGAAGCATACCTGTATTAAGAAATGTCACACGGGCCCTTGTGATGCTGGCAAATGTACCCAACCCTGTACTGAGAAACGTCCATCGTGCGGTCACCCATGCGCCGCCCCGTGTCACACCGGCTCCGCGCACGCCGCGCCCACTACGTGCCCCAGCTCCGCGCCCTGCCGCCGCCCCGTGCGCGCCACCTGCCCCTGCGCCAGGCGCGCCGCGGAGAGGGCGTGCTGTGACAACGCGAGAGACTATGCCAAAATGATGAGCACGCTAGCTGCATCGAAAATGCAAGAGGGTGGGACCGTTGACTTGTCAGATCCCCAACGTCCAGGGAACATGTTAAAAACGCTAGAATGCGATGAAGAATGTCTAGTCGAAGCTCGCTCACGGCGTTTAGCTCTGGCTTTACAGATACGTAACCCGGACGTATCCGCAAAGTTAGCGCCGCGCTACAGCGAACATGTCCGCGCAACCGCTGTAAGAGATCCAGCATTTGCACAACTTGTACATGATCGATTGACTGATCTAGTGCAACTTGCTAAGAAGTCCAAGCAAAAGACGCGTGCGCACTCTTTCCCCTCAATGAACCGTCAGAAGAGACAGTTTATTCACGAGCTTTGTGAACATTTTGGCTGTGAAAGTGTGGCGTACGACGCGGAGCCTAATAGGAATTCATGGTTACCAGCAATGAGCGTGTTAGAAGTGTTAGCGCGTGAAGCGGGCAAGCGTCGCGTGCCTGGACCGGTACTGCGTGCTCCGCCTTCCGCAAGCGCTGCTACT
- Protein Sequence
- MSQWNNSYNYNNQYQPPNNWNGEYNNQYANQSYYPNRQYDHSNQYVSFDEFLSQMHISXVPQSNHANYNNIQYQNYPNTQFNNVPSYHNGATAQSSQSDYMYASNTANFPNNEESYQPSTQNQYNINPVNSNENNYTNEVVFKSKLTPTATEPQSSQQGSTSSFVENNSFQKPRPQDLNXRNXESKYESKNRNQEYPNSHNDSVXYSSNSKNNKDSTNRPNESHRMRNRKSKNRSADNNHDGIHRNHDNVEHGNNHXYRNNDSNTYNQEATGYQDEPNHVQETNNFEGGQSKHSKAKNKESDVGRTFYNSSMPKESQDVRNGRESHGKGRKWAGSQRVRPVERSYVEDEQYANSYLQYREDRNRDNVPNSPMKGRHKSSMVSASANTDMTQRERLSEQLDKGTLECLVCCERVKQIDPVWYCGNCYHVFHLSCTRKWAMSSMVESKWRCPACQNTNQAVPTEYRCMCGTVRNPEYQRGSSGAHTCGKSCKRPRNCPHPCTLLCHPGPCPPCQATVSKQCGCGAETRSVLCSSKLPQVCGRECRKKLECGVHSCTKDCHEGPCDPCGETVTQVCHCPAASARSVPCTSQTGGAPAWSCGAECARVLACGAHVCRSACHAPPCAPCPLRPDNVRSCPCGGTRIHKDQRKSCTDPIPLCGNICTKPLPCGPPGDKHFCKESCHDEVILRPSPLSYSVLCSHVPPLHSCVRSHVILSIAQMRGVLPYWALCTMSQSFEELRCECGTEVILPPVRCGTKPPPCSAPCRRRRACDHPPHHACHSGDCPPCVVLTTKRCYGDHEERKTIPCSQEQFSCGLPCGKPLPCGKHTCIKKCHTGPCDAGKCTQPCTEKRPSCGHPCAAPCHTGSAHAAPTTCPSSAPCRRPVRATCPCARRAAERACCDNARDYAKMMSTLAASKMQEGGTVDLSDPQRPGNMLKTLECDEECLVEARSRRLALALQIRNPDVSAKLAPRYSEHVRATAVRDPAFAQLVHDRLTDLVQLAKKSKQKTRAHSFPSMNRQKRQFIHELCEHFGCESVAYDAEPNRNSWLPAMSVLEVLAREAGKRRVPGPVLRAPPSASAAT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00213096;
- 90% Identity
- -
- 80% Identity
- -