Basic Information

Gene Symbol
-
Assembly
None
Location
Hel:1095614-1117410[+]

Transcription Factor Domain

TF Family
zf-BED
Domain
zf-BED domain
PFAM
PF02892
TF Group
Zinc-Coordinating Group
Description
The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 4.4e-06 0.013 15.2 0.1 14 44 41 71 34 71 0.88
2 11 1.4e-11 3.9e-08 32.9 1.4 3 44 154 194 152 194 0.97
3 11 2.1e-10 5.8e-07 29.1 4.9 3 43 239 278 237 279 0.94
4 11 0.00057 1.6 8.5 0.4 3 43 288 330 286 331 0.89
5 11 2.4e-09 6.7e-06 25.7 3.1 3 43 356 395 354 396 0.95
6 11 1.2e-05 0.033 13.9 0.8 3 30 433 459 431 463 0.86
7 11 8.4e-11 2.4e-07 30.3 6.1 3 44 484 523 482 523 0.95
8 11 4.5e-11 1.3e-07 31.2 6.9 3 44 581 620 579 620 0.96
9 11 1.4e-11 3.8e-08 32.9 6.2 3 44 679 718 677 718 0.95
10 11 1.1e-11 3.1e-08 33.2 6.6 3 44 731 770 729 770 0.95
11 11 9.2e-06 0.026 14.2 0.0 3 43 779 821 777 822 0.92

Sequence Information

Coding Sequence
ATGCAAGTTCAAGAACACAAAACACTTTCTTTTGTGAACAATTTATTTGGATTAAAAGTTTATAAACGCAAAAATGATGCAGTGCCAGAGTGGTTAATGATATATTACATAAAAATTTTTGATAAACAATACAAATGTAACATTTGCGAAAGCATTGTCACATCAGATGACAAATCAAAAGAATTGATGGACCATATAATAAAGTCACACAAGGAAGTTTATGATTTACACAAAGATAATCCTGAATCAAATGTTGGTTTTCAAATTGAATATCTACAATTTAGTATGTTGAAAGATGATAAATCTCAACCTGTCATATTAGAAGAGGTCTGCGAAACAACTGCAGATGTTATAGAGAAGACAGATAATAAAGATCACAAGGAGAGTGTGGATATGCAATATGTACTGGTGCCTCGGAAAAAGAAATTAAGAAAAAAATTTAGTCGCAAACGCAGTTGGGTTTGGAAATATTTTGAAAGTTTGACCAGCATCATATATAGATGCAATCTTTGCAACGTTGTGCTTTCTATAAAAGGCTTCAATTCAAACAATATGAACAGACATGTACGGTCCAGACATCCAAGTGTGTATAAAGCAGAAGTTATGAAAAAAGATATGAGTGAACTAGAACAAGAGATTTCTTGGAAAAATGAGGAAGAAAGTGATAAAGATTTGGATGAAACTAGTAATAAAATAAAACAACGTCGTAGTTGGGTCTGGTCTTATTTCAAGAGATTATCCAGCACTTTAGCTCAATGTAAATTATGCAGCAGGAACATATGTCACGGCGGTAACTCGACTGGGAACATGAATAGACATCTTAAGATGATACATAATAAAATTGGTGATGACCACAACTGGGTGTGGAAAGTTTTCGAGACGGCCGAAGACGATTTCTTCTCGTGTAAAATATGTCAATACAAATGTATGAAATTCGATGACGTCGATAAAAGTGTTACATGTATTTTAGAACATCTTAAAAATGAACACGGGGTCGTGTCGGGAGATCAGATTATTACTGGGACGGAATTAGATATCGATAAATTTGGTCATAAACGCAGTTGGGTTTGGAAATATTTTGAAAGTGTAACCAGCTCCATATATAGATGCAATCTTTGCACCGGAATGATTTCTAAGAAAGGCAGGCAAACAAACAATATGAACAGACATTTTCGATTGAGACACCNGAGCGTGTATAAAAGAGAAGTAAAGAAAAAAGATACGAATAAACTAAAAAGAGAGTGGGAACATGAGGAAAAAAATAAAGATATGAAATTTGGTCATAAACGCAGTTGGGTTTGGAAATATTTTGAAAGTGTAACCAGCTCCATATATAGATGCAATCTTTGCACCGGAATGATTTCTAAGAAAGGCAGGCAAACAAAACAATATGAACAGACATTTTCGATTGAGACACCTGAGCATAAAATGAAAAAGCGATCTAGTTGGGTCTGGTTTTATTTTAAGCGATTATCAAGCAATTTAGCTCAATGTAAATTGTGTAGAAAAAACATACACAGCTGCAATTCAACTGGCAACTTGAGTAGACATCTTAAGATTGTACATAAAAAAATTGGTGAAATAACGAAAAAAGATATAAATGAAATGGAAAAGTGGGAAAATGAGGAAGAGAATCAAGATATGAGTGAACTAGAACAAGAGCTTTCTGGAAAAAATAAGGAAGAAAATGATAAAGATATGGATGAAACTAGTAATAAAATGAAAAAGCGATCTAGTTGGGTCTGGTTTTATTTTAAGCGATTATCAAGCAATTTAGCTCAATGTAAATTGTGTAGAAAAAACCTACACAGCTGCAATTCAACTGGCAACTTGAGTAGACATCTTAAGATTAAACATAAAAAATTTGGTGAAGTAACGAAAAAAGATATGAATGAACTAGAAAAAGAGTGGAAAAATGAGGAAGAGAATAAAGATATAAGTGAACTAGAACAAGAGGTTTCTGGGGAAAATAAGGAAGAAAATGATAAAGATATGGATGAAACTAGTAATAAAATGAAAGAGCGATCTAGTTGGGTCTGGTCTTATTTTAAGCGATTGTCAAGCAATATAGCTCAATGCAAATTGTGTAGAAGAAACATACACAGCTGCAATTCAACTGGCAACTTGAGTAGACATCTTAAGATTGTACATAATAAAACCAATGATAAAATAAAAAAGCGATCTAGTTGGGTCTGGACTTATTTTAAGCGATTGTCAAGCAATATAGCTCAATGCAAATTGTGTAGAAAAAACATACACAGCTGCAATTCAACCGGCAACTTGAGTAGACATCTTAAGATCGTGCATAAAAAAATTGGTGAAGACCACGACTGGGTGTGGCAAGTGTTCGAGACGGACGAAGACGATTTCTTCTCGTGTAAAATATGCGAAAACAAAATTATGAAATTCGACGATGTCAATAAAAGTGTTACATGTATTTTAGAACATCTTAAAGATGAACACGCGGTCGTGTCGGGAGATCAAATTATCGTTGAGACGGAATTAGATATAGATAGTGCTGATTTAAATATTTGTATGGATCATACATATATGTTATGGTGTGGTTGA
Protein Sequence
MQVQEHKTLSFVNNLFGLKVYKRKNDAVPEWLMIYYIKIFDKQYKCNICESIVTSDDKSKELMDHIIKSHKEVYDLHKDNPESNVGFQIEYLQFSMLKDDKSQPVILEEVCETTADVIEKTDNKDHKESVDMQYVLVPRKKKLRKKFSRKRSWVWKYFESLTSIIYRCNLCNVVLSIKGFNSNNMNRHVRSRHPSVYKAEVMKKDMSELEQEISWKNEEESDKDLDETSNKIKQRRSWVWSYFKRLSSTLAQCKLCSRNICHGGNSTGNMNRHLKMIHNKIGDDHNWVWKVFETAEDDFFSCKICQYKCMKFDDVDKSVTCILEHLKNEHGVVSGDQIITGTELDIDKFGHKRSWVWKYFESVTSSIYRCNLCTGMISKKGRQTNNMNRHFRLRHXSVYKREVKKKDTNKLKREWEHEEKNKDMKFGHKRSWVWKYFESVTSSIYRCNLCTGMISKKGRQTKQYEQTFSIETPEHKMKKRSSWVWFYFKRLSSNLAQCKLCRKNIHSCNSTGNLSRHLKIVHKKIGEITKKDINEMEKWENEEENQDMSELEQELSGKNKEENDKDMDETSNKMKKRSSWVWFYFKRLSSNLAQCKLCRKNLHSCNSTGNLSRHLKIKHKKFGEVTKKDMNELEKEWKNEEENKDISELEQEVSGENKEENDKDMDETSNKMKERSSWVWSYFKRLSSNIAQCKLCRRNIHSCNSTGNLSRHLKIVHNKTNDKIKKRSSWVWTYFKRLSSNIAQCKLCRKNIHSCNSTGNLSRHLKIVHKKIGEDHDWVWQVFETDEDDFFSCKICENKIMKFDDVNKSVTCILEHLKDEHAVVSGDQIIVETELDIDSADLNICMDHTYMLWCG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-