Hcyd003414.1
Basic Information
- Insect
- Heliconius cydno
- Gene Symbol
- Smarcc1
- Assembly
- GCA_036379175.1
- Location
- FAPN01073712.1:1-1603[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.8e-15 5.8e-12 46.6 0.1 3 44 59 100 57 102 0.95
Sequence Information
- Coding Sequence
- TTTTTTATAGCGGAAAATGCTGCCGTACCCAAAGTGGAAGCAGGTTTACCAAATGGAACGGAAGCTGGTCCTCCTGTAAAGGctgaacctaatgttaaaccTGAGCCTCTGTTAGAACTTGGCACTGCGTCTGGACTCAAGATGGATCAATATCGAGGCGGAGCTAGAGGTCGTGAATGGACCGACCAAGAAACCCTTTTATTACTAGAAGCATTAGAACTCCACCGTGACGACTGGAACCGAGTGGCTGCCCACGTCGGCACCAGGACCCATGATGAGTGTATTCTTCACTTCTTACGACTGCCTATAGAAGATCCGTATTTGAATGATAATTCTACTGGCAGTGTCCTCGGACCGCTCGCGTACCAGCCGATCCCCTTCAGCAAAACTGGTAACCCCGTGATGAGCACGGTGGCCTTCCTGGCGTCCGTGGTGGACCCTCGCATCGCGTCTAAAGCCACGCGCGCCGCCATGGACGAGTTTGCTGCTATCAAGGACGAAGTGCCGGCGGCAATGATGGAGGCGCACGTGAAGGCGGCGGGCACGCATGGACCCTCGGCTGCGCTCGCCGCCACTGGCATCGCGGGCACGGCGCCGCCCGCCCCCCCCTCCCCCCCT
- Protein Sequence
- FFIAENAAVPKVEAGLPNGTEAGPPVKAEPNVKPEPLLELGTASGLKMDQYRGGARGREWTDQETLLLLEALELHRDDWNRVAAHVGTRTHDECILHFLRLPIEDPYLNDNSTGSVLGPLAYQPIPFSKTGNPVMSTVAFLASVVDPRIASKATRAAMDEFAAIKDEVPAAMMEAHVKAAGTHGPSAALAATGIAGTAPPAPPSPP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -