Hcyd006937.1
Basic Information
- Insect
- Heliconius cydno
- Gene Symbol
- bab1
- Assembly
- GCA_036379175.1
- Location
- FAPN01068566.1:1316-6401[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.3e-13 6.8e-10 39.5 0.0 4 45 329 370 326 370 0.92
Sequence Information
- Coding Sequence
- ATGGGGAGTAGCGAAGGTCAGCAAACCTTTTGCTTAAAATGGAACCATCATAAAACTAACTTAGTAGAAATTTTAGAGGCTTTAATAAAAGTCGAAACATACGTTGATTGTACACTAGTCGTCGATGATCAAGTAACATTTAAAGCGCACAGGGTAGTGCTTGCTGCTAATTCACCATACTTCCAGTCAATATTAGCAGATGTCCCCATGGATCATTGCAGTATACTTTTCCCAGGAGTTAAGGATTTCGAAATGCGTGCTCTGCtcgaatatatgtatacaggaGAAGTTAATGTCACGCAAGCTCATATTCCGCGTATTATGAAAGTTGCAGAACAACTTGAAGTAAAGGGTCTGTTTGATATGACAGAACTTCGGCGTAGACCAGGAAGTAGTGAACGCACTCCTGCAGCTTCTCCTCCGCGTGTGGTACCCGCTGCACCATCTAGCGTGTCACCTCCCATGCCAAATAATCGATGGCCACTACCGCCCACAGCGCCTGTACTTTCTGCCGCTTATGATTCAGCAGACATGAACCCATTAAAACGCAAAAAACTTTCAAGCATGCTAGCTACTCGTGATACTCCCATATTAAGAAATGTTCTCGCCCAAGCCACTCCAGTTGATTCCTCGCAACCTATGTCCCTTGTGTGCCACCCTGTTAATCAGCACGAATCGACACGTTTACACTCTAATGGTTCGGCCCATGAATCTGAGAGACCTGCTAGCCCACAAAGGCCTTTCGATTATCGTCCTAGGAGATTATCATCTAGGGCTTCTTCACCTCATTACAACCGCTCAGACCGTTCTGAAGATGCTCATTCACCATACACCGAGCGATCATTCGAGGATGACAATCAACGATCTTTCCATCCATCTCCGCCTCCAACAAATTTCCAACAAGATGTAAGAGCTGGATTAGCCCCGTACGTGCCACCGCAACAAAAACCTGAGTGGAAGCGATATAAGCAGTATACGAGATCAGATATAATGTCTGCTATTGAATGTGTTCGAAATGGAATGAGCGCATTACAAGCTTCACGTAAATATGGTGTACCATCACGCACATTGTacgataaagtaaaaaaattaggaaTCACTACAAGTCGTCCTATGAGCCGAGGAGTTAAAAGAGAATCAAATGGGGCCGCTTTTCCCTACGGTCTAAGTGGAACCGGCGGTAACGACGACGGGGCACCAACAACTCCACTTATAGATCCATCTTTTCTACAACAAGCGTTAGAAGGAGCTACTCGAGATGGAGGTCGAGAAGCTCTACATGCAATGGCTTTAGCTGCTGCTGCACACGCTGCGTTAGCCCCACGAACACCACCTCGTTCAGCACCCCCATCACCCAGATCTCCTGCAGATGATGATCATGTTGAAGACCTGTCAGTAGCAAGGCGCCGTGATCCAGATCCCCCTTCAGGTGTCATAGTTCCACCTCGTAATTTTGCTCTTGATTGTAGCAGCGAAAGAGATTGA
- Protein Sequence
- MGSSEGQQTFCLKWNHHKTNLVEILEALIKVETYVDCTLVVDDQVTFKAHRVVLAANSPYFQSILADVPMDHCSILFPGVKDFEMRALLEYMYTGEVNVTQAHIPRIMKVAEQLEVKGLFDMTELRRRPGSSERTPAASPPRVVPAAPSSVSPPMPNNRWPLPPTAPVLSAAYDSADMNPLKRKKLSSMLATRDTPILRNVLAQATPVDSSQPMSLVCHPVNQHESTRLHSNGSAHESERPASPQRPFDYRPRRLSSRASSPHYNRSDRSEDAHSPYTERSFEDDNQRSFHPSPPPTNFQQDVRAGLAPYVPPQQKPEWKRYKQYTRSDIMSAIECVRNGMSALQASRKYGVPSRTLYDKVKKLGITTSRPMSRGVKRESNGAAFPYGLSGTGGNDDGAPTTPLIDPSFLQQALEGATRDGGREALHAMALAAAAHAALAPRTPPRSAPPSPRSPADDDHVEDLSVARRRDPDPPSGVIVPPRNFALDCSSERD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00025187;
- 90% Identity
- iTF_01337697;
- 80% Identity
- iTF_00776813;