Hcyd033091.1
Basic Information
- Insect
- Heliconius cydno
- Gene Symbol
- -
- Assembly
- GCA_036379175.1
- Location
- FAPN01138297.1:206-1481[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.3e-12 9.6e-09 35.9 0.0 4 40 58 95 56 98 0.91 2 2 9.1e-06 0.026 15.2 0.7 2 27 110 135 109 135 0.94
Sequence Information
- Coding Sequence
- ATGGAAATGATAAATGAAGCGGCGGACTCGTCGGAGTTCGTACCACTGATGATCAAAGACGAGCCGAGTTCAGAAGGCGAACAACCACATCTAAGCAGTGATGACACAGACTCAAACGGACCGACACAAGAAACGTTCAGCCGATCGAGTCCCAAGAGCTGGACTCAACTAGACATGGAGAAAGCTCTGGAAGCTTTGAGAAAACATCACATGAGTTTGACTAAGGCATCAGCAACCTACGGTATCCCATCAACTACCCTGTGGCAAAGGGCACACAGGCTCGGTATAGATACTCCCAAAAAGGAAGGGGCTTCGAAGTCGTGGAGCGAAGCGGATTTAAAAGGAGCTTTACACGCTTTACGAGCCGGCGCCATATCTGCTAACAAGGCTAGCAAAGCTTATGGTAAGAGATTATAA
- Protein Sequence
- MEMINEAADSSEFVPLMIKDEPSSEGEQPHLSSDDTDSNGPTQETFSRSSPKSWTQLDMEKALEALRKHHMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGASKSWSEADLKGALHALRAGAISANKASKAYGKRL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00781757;
- 90% Identity
- iTF_00781757;
- 80% Identity
- -