Hcon022442.1
Basic Information
- Insect
- Heliconius congener
- Gene Symbol
- -
- Assembly
- GCA_018230605.1
- Location
- DWAO01035940.1:531-2562[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.5e-05 0.066 13.9 0.0 22 39 5 23 4 27 0.82 2 4 5.7e-12 1.5e-08 35.2 0.2 2 39 39 76 38 79 0.92 3 4 1.9e-17 5e-14 52.8 0.1 2 45 94 138 93 138 0.96 4 4 3.3e-18 8.8e-15 55.2 0.0 1 38 145 183 145 187 0.94
Sequence Information
- Coding Sequence
- ATGTGTGTATCGGCATCAGCAACCTACGGCATCCCATCAACTACCCTGTGGCAAAGGGCACACAGGCTCGGTATAGATACTCCCAAAAAGGAAGGGGCTTCGAAGTCGTGGAGCGAAGCGGACTTAAAAGGAGCTTTGCACGCTTTACGAGCCGGTGCCATATCTGCTAATAAAGCAAGCAAGGCTTATGGCATCCCGTCCAGCACGCTGTACAAGATAGCGCGGCGCGAGGGCATCCGCCTGGCCGCGccgttcaacgccgcgcccaCCGCCTGGCGCCGCGCCGACCTCGAGCGCGCGCTGCACGCCATCCGCGCCGGCCACGTGTCCGTGCAGCGCGCCGCGCACCTCTACGGCATACCCACCGGTACTCTATACGGAAGGTGTAAGCGTGAAGGTATAGAGCTGTCCCGCTCTAACCCCACGCCGTGGTCGGAGGACGCCATGGAGGAGGCTCTCGAGGCTGTCAGAATTGGTCAAATGTCTATAAATCAAGCGGCCATTCACTATAATTTGCCATACTCGTCGTTGTATGGGCGATTCAAGAGATGTAAATTTCAACCGGTTCAGaacCAACCACCAATCACAACAGACGCTGAGCCTCGTGACGCCTCTGACCCCGTTGACCCCCTCGACCCCTACCCCCAGTATGGCGTCGTGAACCCTCACGCGCAGACGCAGGTCACCAATGTGTACCCACACGCGCATGTCTCATACGAAACTTACCCATACGCAATGTATTACACGCAGTGCGACGTCACTAGCTGA
- Protein Sequence
- MCVSASATYGIPSTTLWQRAHRLGIDTPKKEGASKSWSEADLKGALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRADLERALHAIRAGHVSVQRAAHLYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMEEALEAVRIGQMSINQAAIHYNLPYSSLYGRFKRCKFQPVQNQPPITTDAEPRDASDPVDPLDPYPQYGVVNPHAQTQVTNVYPHAHVSYETYPYAMYYTQCDVTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00778689;
- 90% Identity
- iTF_00778689;
- 80% Identity
- iTF_00778689;