Basic Information

Gene Symbol
cnc
Assembly
GCA_018230605.1
Location
DWAO01004907.1:1-5526[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8.8 1.5e+04 -2.9 0.0 19 36 198 215 194 230 0.70
2 2 1.4e-13 2.3e-10 41.3 5.0 3 58 241 303 239 308 0.83

Sequence Information

Coding Sequence
AGGGACTCGGCGTCGGACAGCGCAGTCTCCTCCATGGGGTCGGAAAGAGTGCCATCACTATCTGACGGAGAGTGGTGTGATGGTAGTGACTCGGCTCAGGAGTTTCATAGtTCAAAATTCCGCCCCTACGAAGGTGCATATGGGAGAGATCGCGCATCCCACGCGCCACAGAAAAAACACCATATGTTCGGCAAGAGATGTTTTCAgGAGCAGCCAACTCCCGCGCCCCTCGAACCCCTTGTCCCTCGACCGCCCGTCGTGAAATACGAATGTGAACAACCATACCACGAGAATATGCAAATGCATAACGtggaCTATCCATCTCGTCATCAAATCCCTCCACACGTGACCACATTACAGCCCGCCATGGATCTAAACACACCACATTCTAGCCATGCTCTTTTACagaacACAATACCATCAGTAAGTCCACCCCGTTTCGGCTTTAATTCCGGAGATAGAGTGAGACACAACCATACATACAGCGCTCCCGTACCGCCGGCGGACTCGAGACAGCATACTAGAGACAAACGAAtccgTCGTCTAACAGACGGCAGTACGTCAGATGGGGGAAGTACTGCGGGACATCTTTCACGCGACGAGAAGAGAGCTAAGGCACTTGgtattccACTAGAAGTACAAGATATAATTAACTTGCCCATGGATGAGTTCAACGAGCGTCTCTCAAAACACGATTTAAGTGAAGCGCAACTCTCACTTATAAGAGATATCAGAAGAAGAGGCAAGAATAAgGTGGCCGCACAGAACTGCCGCAAGCGCAAGCTGGACCAGATCACGTCGCTGGCCGACGAAGTGCGCACGGTGCGCGACCGCAAGGTGCGCACGCAGCGCGACCACCACGCGCTGCTCGCCGAGAGGCAGAGGGTCAAGGAGAGGTTCGCTGCCCTCTACAGGCACGTGTTCCAGAATTTACGCGATCCAGAAGGCAGGCCGCTCTCGTCCACTCAGTTCTCGTTACAACAAGCGGCCGATGGGAACGTAGTGCTTGTGCCCAAAATGCATCACGACCATCCAATGAATCGCACATCCGACGACGAGATGGACAGGAAAACTAAAAACTACGAACAGTGA
Protein Sequence
RDSASDSAVSSMGSERVPSLSDGEWCDGSDSAQEFHSSKFRPYEGAYGRDRASHAPQKKHHMFGKRCFQEQPTPAPLEPLVPRPPVVKYECEQPYHENMQMHNVDYPSRHQIPPHVTTLQPAMDLNTPHSSHALLQNTIPSVSPPRFGFNSGDRVRHNHTYSAPVPPADSRQHTRDKRIRRLTDGSTSDGGSTAGHLSRDEKRAKALGIPLEVQDIINLPMDEFNERLSKHDLSEAQLSLIRDIRRRGKNKVAAQNCRKRKLDQITSLADEVRTVRDRKVRTQRDHHALLAERQRVKERFAALYRHVFQNLRDPEGRPLSSTQFSLQQAADGNVVLVPKMHHDHPMNRTSDDEMDRKTKNYEQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00620977;
90% Identity
iTF_00620977;
80% Identity
-