Hcha007935.1
Basic Information
- Insect
- Heliconius charithonia
- Gene Symbol
- SMARCC2
- Assembly
- GCA_030704555.1
- Location
- CM060817.1:5281791-5302160[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.7e-14 3e-11 43.8 0.1 3 44 525 566 523 568 0.95
Sequence Information
- Coding Sequence
- ATGAAAGTGTTCATGGACATGAAACCGGGTGGTTCTTTGTGCACGGTGCTCGCCACCATGTTCCGCTTCAAGTCGGAGCAGCGGTGGCGCAAGTTCGACTTCCAGGTCGGTAAGAATCCGTCACGGAAGGATTTGAACGTGCAAATGATGATGGAAATTGAATCTTCCTTGTTGGGAGCTGAGCTTGTACGATCACCGTGTATCTTCATACGGCCCGAAGTTGACAAAGCCACTGCGAATAAAGTTAAAGATATTATTGTGAACCATCAAGGTGAAATATGTGaggACGAGGAAGACGCGACGCACATCATCTATCCAGCAGTGGATCCTTTGGAAGAGGAATACGCCCGCCCTGTATTTAAACGTGGCAACAATGTCCTCATACATTGGTACTATTTCCCCGACAGCCACGACACTTGGGCACCATCTGATCTACCGatagaCGTACCGGAATCGGCTAACTGGGATTGCAACCGACCGGAGCCGTGGCGTGTCGCGGCCACGTGGGCGTTGGACCTCCCTCAATACAATGAGTGGATGAACGAGGAGGATTACGAAGTGGATGTTAATGGGAAAAAGAAGGTACACAAATTACGTTTATCAGTGGACGATTTGATACCTGGCGGAGAAACATCCGGGAAAAGCAAAAAGGGAAAGAGGAAGCGATCGCCATCCCCGCCGCCTCAGAAACATAGCAAGAGAAAGGGTCGCGTATCGAAACGTCGTGACAATGATGGAGAAGACGAGGACGACAACGCGTCACGGGACAATACTGACGTCGCGCCCACGCCTGAAAGCGAACGTTCCACTGACACGGGCGCGGCGCCGGcgagcgcgggcgcggcgggcgcggcggcgagCGCGTCGGCGGCGCCCAGCGAGGCGGACGCGCCCGCCACGCCCGCGCCCGCCATGGACGCGCACGACGACTCGCAGGGGAAACACAGCGACTCCAACACGCAGgaaaTGTTAACAAAAGAAGAATTAGAAGACAATGTAACAGATCAGACCCATCACATCGTGGTGCCGTCGTATTCCGCCTGGTTCGACTACAACTCGATTCATACTATTGAAAAACGCGCCTTGCCAGAATTTTTCAATAACAAGAATAAATCTAAGACGCCGGAAATATATTTGGCTTACAGGAACTTCATGCTAGATACATACAGACTCAACCCTACAGAGTATCTCACCAGTACGGCGTGTCGTCGTAATCTAGCGGGTGACGTGTGCGCCATTATGCGCGTTCACGGCTTTTTGGAACAATGGGGGCTTATTAATTACCAGGTGGAAGCGGAATCTCGTCCAACGGCTATGGGACCACCTCCAACGTCCCACTTCCACGTGTTGTCAGACACGCCGTCCGGCCTACAACCGCTACAGGCGAGGCCTACACAACCAAGACCGGctgaaAATGCTGCAGTACCCAAAGTGGAAGCAGGTCTACCAAATGGAACGGAAGCCGGTCCTCCTGTGAAGCCTGAACCTAATGTGAAACCTGAGCCTCTGTTAGAACTTGGCACTGCATCTGGACTCAAGATGGATCAATATCGAGGCGGAGCTAGAGGTCGTGAATGGACCGATCAAGAAACCCTTCTATTACTAGAAGCGTTGGAACTCCACCGCGACGACTGGAACCGCGTGGCTGCCCACGTCGGCACGAGGACCCATGATGAGTGTATATTACACTTCTTACGGCTGCCTATAGAAGATCCGTATTTGAATGATAATTCCACTGgcAGCGTCCTCGGTCCGCTCGCGTACCAGCCAATCCCCTTCAGCAAAACTGGTAACCCCGTGATGAGCACAGTAGCCTTCCTCGCGTCCGTAGTGGACCCTCGCATCGCGTCTAAAGCCACTCGCGCCGCCATGGACGAGTTTGCTGCTATCAAGGACGAAGTGCCGGCGGCCATGATGGAGGCGCACGTGAAGGCGGCGGGCACGCACGGGCCCTCGGCCGCGCTCGCCGCCACCGGCATCGCGGGCacggcgccgcccgcgcccccgCCAGGCGAAAAGAAAGAAGGTACACCAGAAGTGAAAACAGAAGCAATGGACGTAGACGGGGAAGCTGAGGCCAAAGTGAAGGAAGAGCCGGCTGAGCCTCCTGCTGATGAGGTGAAGGATAAGGATGATGCTACGCCGCCGCCTGAAGCACCAGCAGCTGTAGACTCCAAGCTCCAATCAGCAGCGGCAGCAGCACTTGCAGCAGCAGCAGTAAAAGCTAAACACCTGGCAGGCGTGGAAGAGAGAAAGATCAAATCTCTAGTCGCTCTACTAGTGGAAACACAGATGAAGAAACTGGAAATTAAATTACGCCATTTTGAAGAGTTGGAAGCCACTATGGAGCGGGAGAGAGAAGgtttgGAGTATCAACGGCAGCAGTTAATACAGGAACGTCAGCAGTTCCATCTAGAGCAATTGAAGGCGGCTGAATTTCGCGCGAGAAACCATGCTATTCAAAGGTTACAAGCGGAATCCGGTGGAGTGGTACCAGGTGTCCCCAGCGTGGCGGTAGCAGGCGCCGGCCCAGGAGCCCCAGTACCACCTGAACCGCCGACCGAGGCGCCCACACAACCGCACCACgcttag
- Protein Sequence
- MKVFMDMKPGGSLCTVLATMFRFKSEQRWRKFDFQVGKNPSRKDLNVQMMMEIESSLLGAELVRSPCIFIRPEVDKATANKVKDIIVNHQGEICEDEEDATHIIYPAVDPLEEEYARPVFKRGNNVLIHWYYFPDSHDTWAPSDLPIDVPESANWDCNRPEPWRVAATWALDLPQYNEWMNEEDYEVDVNGKKKVHKLRLSVDDLIPGGETSGKSKKGKRKRSPSPPPQKHSKRKGRVSKRRDNDGEDEDDNASRDNTDVAPTPESERSTDTGAAPASAGAAGAAASASAAPSEADAPATPAPAMDAHDDSQGKHSDSNTQEMLTKEELEDNVTDQTHHIVVPSYSAWFDYNSIHTIEKRALPEFFNNKNKSKTPEIYLAYRNFMLDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHGFLEQWGLINYQVEAESRPTAMGPPPTSHFHVLSDTPSGLQPLQARPTQPRPAENAAVPKVEAGLPNGTEAGPPVKPEPNVKPEPLLELGTASGLKMDQYRGGARGREWTDQETLLLLEALELHRDDWNRVAAHVGTRTHDECILHFLRLPIEDPYLNDNSTGSVLGPLAYQPIPFSKTGNPVMSTVAFLASVVDPRIASKATRAAMDEFAAIKDEVPAAMMEAHVKAAGTHGPSAALAATGIAGTAPPAPPPGEKKEGTPEVKTEAMDVDGEAEAKVKEEPAEPPADEVKDKDDATPPPEAPAAVDSKLQSAAAAALAAAAVKAKHLAGVEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLIQERQQFHLEQLKAAEFRARNHAIQRLQAESGGVVPGVPSVAVAGAGPGAPVPPEPPTEAPTQPHHA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00782588;
- 90% Identity
- iTF_00781780;
- 80% Identity
- -