Basic Information

Insect: Heliconius aoede
Gene Symbol: -
Assembly: GCA_037355905.1
Location: JBAIZZ010000203.1:760251-769361[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 2.1 1.3e+02 3.5 0.3 3 23 115 135 113 135 0.94

2 18 0.43 26 5.7 0.2 2 23 139 161 138 161 0.91

3 18 0.91 54 4.7 0.2 2 23 438 460 437 460 0.95

4 18 0.3 18 6.2 0.2 1 20 468 487 468 488 0.95

5 18 0.032 1.9 9.3 0.3 2 23 499 520 498 520 0.93

6 18 2.7 1.6e+02 3.2 2.9 1 23 536 559 536 559 0.94

7 18 0.0071 0.43 11.3 1.6 1 23 568 591 568 591 0.94

8 18 3.9 2.3e+02 2.7 2.0 3 23 667 688 665 688 0.88

9 18 2.8 1.7e+02 3.2 2.6 1 23 693 716 693 716 0.92

10 18 5e-05 0.003 18.1 1.2 1 23 722 744 722 744 0.97

11 18 8.3e-05 0.005 17.4 1.2 1 23 751 773 751 773 0.98

12 18 9.2e-05 0.0055 17.2 2.3 1 23 778 800 778 800 0.96

13 18 0.00069 0.042 14.5 1.8 1 23 806 828 806 828 0.99

14 18 1.9e-06 0.00011 22.6 1.4 1 23 834 856 834 856 0.98

15 18 8.8e-05 0.0053 17.3 1.5 3 23 864 884 863 884 0.98

16 18 0.00018 0.011 16.3 0.2 2 23 892 914 891 914 0.97

17 18 0.0012 0.07 13.8 0.2 1 23 919 941 919 941 0.98

18 18 0.14 8.3 7.3 4.1 1 23 947 970 947 970 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	2.1	1.3e+02	3.5	0.3	3	23	115	135	113	135	0.94
2	18	0.43	26	5.7	0.2	2	23	139	161	138	161	0.91
3	18	0.91	54	4.7	0.2	2	23	438	460	437	460	0.95
4	18	0.3	18	6.2	0.2	1	20	468	487	468	488	0.95
5	18	0.032	1.9	9.3	0.3	2	23	499	520	498	520	0.93
6	18	2.7	1.6e+02	3.2	2.9	1	23	536	559	536	559	0.94
7	18	0.0071	0.43	11.3	1.6	1	23	568	591	568	591	0.94
8	18	3.9	2.3e+02	2.7	2.0	3	23	667	688	665	688	0.88
9	18	2.8	1.7e+02	3.2	2.6	1	23	693	716	693	716	0.92
10	18	5e-05	0.003	18.1	1.2	1	23	722	744	722	744	0.97
11	18	8.3e-05	0.005	17.4	1.2	1	23	751	773	751	773	0.98
12	18	9.2e-05	0.0055	17.2	2.3	1	23	778	800	778	800	0.96
13	18	0.00069	0.042	14.5	1.8	1	23	806	828	806	828	0.99
14	18	1.9e-06	0.00011	22.6	1.4	1	23	834	856	834	856	0.98
15	18	8.8e-05	0.0053	17.3	1.5	3	23	864	884	863	884	0.98
16	18	0.00018	0.011	16.3	0.2	2	23	892	914	891	914	0.97
17	18	0.0012	0.07	13.8	0.2	1	23	919	941	919	941	0.98
18	18	0.14	8.3	7.3	4.1	1	23	947	970	947	970	0.97

Sequence Information

Coding Sequence: ATGGTATCCGACGAGTCAGATGATGAACCTCTATCTAATTTGGCAGCCAAGAAAAAGTCCGGAGAGTATGAATATGAGCCGCCAAGTAGTAGTGATGaagaacctaaaaaaaaaaagaagaaaaaggaACTACCGGCAAAAAAATTAGGagtgacaataaaattaaatcgaaaATTAAACTCCTTGGTCGGTCCCGCTGTAATAGAGAGACCGTCCGATGTTTGGCTTTACTTGAAAGATCTGAATCCGACCGGACCTTATAGTTGCTTACTGTGCACAGATTGGTTTATAAATAGATCTAAAATGATTTTACATTATGCATTAAATCATAAGAAAGATTTTTGTGGTATTTGCAGatattttgtACCGGACAGAAGTTCATGGTTTGAACATGAAAAGTTCCATTCGCCGTGGCCCTGTTCACAATGTGTGGAAACTTTCTCCACTGATGTTCAGTTACGTTTCCATCTCAGCTCTATTCATAACTTAGTTCACTGCCGCCTTTGCCACTTTAGGGTGACAGCTGATGATGATTACAGTTCTCATTTATTCCAAAAACACAATGTTACCAATGCTGCCTGCCAAAACGATGAACAGTTTTGGCAAGTAGATTATGATGGAGATGATAAGTTTATGTGTTCACTATGTTCAAAGCCAGATTTACTGTGCTCAACTTTTTTTGCTCATTACATGGGTTTCCATCATTTCACATTGAAATGTTTGACACACCTTATAGCTGGCAAAAATACATCATTCTTAGTGGAAGGTGCTGATGTTACTGATCGTTTTGTTAATGAACAGCTAAAAGGTCATGTAAGGCTTGGTTATGTAGACTTGACACCAAAGACTGACACACcaaaagttataaaagaaaatgttttaccAATAGAAATTGTTCTGCCTGAAGTAAAACAAGAAATTGTAAGTGACCATGAAGACCAGAACAATGTGCCACCTTTGACATCTGCCCCTCCACTTGAACCTGCACTTCCTCCTGCACCTTCACCTGCACCTACACTTCCACCTACACCTGCACCTGTTATCATGCCCAGCGATGACAATGTACCAAAAGATGACACTTTACCTAAAGATGAAAACATAGCAAAAGATGAGAACAGCCAAAGCAGTGATAGTGTATTAGCCTATAAAGGAAGTGAAGACTATGATGTAACAGTCACAGAAATGATTGTTATAGAAAGATCTTACTTTGACTATGTGAACCAATTGCTAGCTAGTGTAAATGAGGATGTAGTGCCACAGCTTTCGCATATCGACTATGATAAACTTAAATCAGATATGTTAAACAATGTGTCATGTCCCTTATGTGCAACTAAATTGGAAACAGTACAATCATTTTCCACACATATGAATAAAGTTCATAGTGTGAAAACAGTGCCTTTATATTCCTGTAGAGTTTGTGCAACATTTTTTGACACATACAATGAACTGGCAAATCATACAGCGTGTGAATTTGCTGATTTTGATGATTTATGGATATGTCAATTTTGTGACAAAGAATTTGATAATCGTGAAGCAACAAGAGAGCATTTAACAGAACATTGGACATATTTAGACTATGAGAACTGCTTTAGCCCCCACATTGgattcaaatgtaaatattgttccACATTGTTCTGGAATGAGCATGATAGGGAAACTCATCAGTTGAGGGTTCACttccataaatataaagaacatttttataagtgtGACACTTGTGCTAAAACTTTTGGTGATAAgGTATGGTACATACATCATTATCTGGAAAAACATTGTGAGGACGACGACAAAGCATTCCTTGTCAAATGTTGTCTTTGCTGTAGTGTTCTCGAGAGTGTAGAAGAAATGAGAAGTCATTTTGCATCAAATCATGCTGAAGTACGGAAGATGTACTGTTCCCTTGAGCCTTGTATGTACAAACCGCTGAGTCATAGGAAGTCCTTCAAGTTACATGTTAAGATGGTCCATGGGGCACCAAAGCCCGAAAAGGTCGTCCACTGCAATGTCTGCCAGCGCGAGTTCCAAAGTGCGCGCGCGTGCTCCACCCACATGGCCCAGATACACGGCCCCGGCAAGTTTAAGTGTAAACTTTGTAAGGAAGTGCTGCAGACACTTGATGAAAGAAAACTCCACTACCTCCTTTGTCATCCGGGTCGACATCCGTTCGAGTGTGTGGATTGCGGCAAGTCGTTCCAGTACAAGTCCTCCCTATATATGCACAGACAGGACCACCTACCCAACAAACAGACATACACTTGTAGTTATTGTGCTAAGACATTTGCGAAGAAGGACTCGTACCGCGAACACGTCCAGATCCACGAGGGTCCCCGCCACGCGTGCTCCTACTGCCCCATGCGCTTCGTCCAACGTTCGAATATGCTGCGCCACGAGCGCCGTCACACCGGCGAGAGGCCGTACCGCTGCGCCCACTGCCCCCGCGCCTTCGCCGACAAGGGCGCGTGCACCGCGCACACCAGAACGCATTCTAAAGACAGGAGCTACGCCTGTCTGTACTGTGGACAGACGTTTGTACAGAAGTCCAAGCTGACATATCATATTAGAAAACATACTGGAGAGAATCTAGAAGCGTGTCCAGTTTGCTCCAAGCTGTTCACAAGTGCGTGTTCTTTGCGCGAGCACATGAAGACACATCTGACAAAGCGACAAATAGTCAAATGTCCGTTGTGCGATAAGGGCTACGCGGACGAGCGGTACATGCTGCGCCACTTACGCACGTCGCACACTCGCTCGCAGTTCAGCTGCCCCATTTGCACGAAGCTGCTGACCAGCGCTGCCGGCTTGCGCCACCACGTCATCACGCATAGCCCCTTGAACACTTTCAGGTGCAAGTGCTGTCCAAAATCCTACGCAGTGAAACGTACGATCATTAAACATCTGCGCAAACGCCACGGCCTCAAAGGCGGGGATTTGAACCTGAAAGACTTTTACACGCGCCTAGAGCCAAGAGAGTGTCAACTCAAGTTAGACGAAACCACAATGACAACCATTTTCGGACCCCCAAAGAAACCTGCACCGGAAGTACTAATCGCTGACTTTGTAACATTCTCCAAGAAAATCTCTTTTGCACAAAATATAGAGAACAATAATACTGATGACACAGAAGAAGATAATGACGCTAATGATGGCAAAGACAGTGATAATGATCGTGATAATGATGGTGGCAGCAACAGTGAAACGGAAGAACAAATGCCACGAATCAAACAGGAAGTGGTTAGTGGTGATGAACTAGAGCCCACTGACTTTGTAAGTGTCAAGATTGAGCCCATAGAGGATGATAATGTCGATTAG
Protein Sequence: MVSDESDDEPLSNLAAKKKSGEYEYEPPSSSDEEPKKKKKKKELPAKKLGVTIKLNRKLNSLVGPAVIERPSDVWLYLKDLNPTGPYSCLLCTDWFINRSKMILHYALNHKKDFCGICRYFVPDRSSWFEHEKFHSPWPCSQCVETFSTDVQLRFHLSSIHNLVHCRLCHFRVTADDDYSSHLFQKHNVTNAACQNDEQFWQVDYDGDDKFMCSLCSKPDLLCSTFFAHYMGFHHFTLKCLTHLIAGKNTSFLVEGADVTDRFVNEQLKGHVRLGYVDLTPKTDTPKVIKENVLPIEIVLPEVKQEIVSDHEDQNNVPPLTSAPPLEPALPPAPSPAPTLPPTPAPVIMPSDDNVPKDDTLPKDENIAKDENSQSSDSVLAYKGSEDYDVTVTEMIVIERSYFDYVNQLLASVNEDVVPQLSHIDYDKLKSDMLNNVSCPLCATKLETVQSFSTHMNKVHSVKTVPLYSCRVCATFFDTYNELANHTACEFADFDDLWICQFCDKEFDNREATREHLTEHWTYLDYENCFSPHIGFKCKYCSTLFWNEHDRETHQLRVHFHKYKEHFYKCDTCAKTFGDKVWYIHHYLEKHCEDDDKAFLVKCCLCCSVLESVEEMRSHFASNHAEVRKMYCSLEPCMYKPLSHRKSFKLHVKMVHGAPKPEKVVHCNVCQREFQSARACSTHMAQIHGPGKFKCKLCKEVLQTLDERKLHYLLCHPGRHPFECVDCGKSFQYKSSLYMHRQDHLPNKQTYTCSYCAKTFAKKDSYREHVQIHEGPRHACSYCPMRFVQRSNMLRHERRHTGERPYRCAHCPRAFADKGACTAHTRTHSKDRSYACLYCGQTFVQKSKLTYHIRKHTGENLEACPVCSKLFTSACSLREHMKTHLTKRQIVKCPLCDKGYADERYMLRHLRTSHTRSQFSCPICTKLLTSAAGLRHHVITHSPLNTFRCKCCPKSYAVKRTIIKHLRKRHGLKGGDLNLKDFYTRLEPRECQLKLDETTMTTIFGPPKKPAPEVLIADFVTFSKKISFAQNIENNNTDDTEEDNDANDGKDSDNDRDNDGGSNSETEEQMPRIKQEVVSGDELEPTDFVSVKIEPIEDDNVD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00777535;
90% Identity: iTF_00779027;
80% Identity: -