Basic Information

Insect: Heliconius aoede
Gene Symbol: pita
Assembly: GCA_037355905.1
Location: JBAIZZ010000173.1:1357121-1370008[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 1.8 1.1e+02 3.7 0.4 3 23 199 220 197 220 0.87

2 10 0.00053 0.032 14.9 0.5 2 23 226 247 225 247 0.97

3 10 0.00031 0.018 15.6 0.5 1 23 253 276 253 276 0.94

4 10 0.029 1.8 9.4 0.1 2 23 283 304 282 304 0.97

5 10 1.5e-05 0.00088 19.8 1.6 1 23 311 334 311 334 0.96

6 10 1.8e-05 0.0011 19.5 1.2 1 23 340 362 340 362 0.98

7 10 5.9e-05 0.0035 17.9 7.7 1 23 368 391 368 391 0.97

8 10 0.005 0.3 11.8 0.2 1 23 408 430 408 430 0.95

9 10 0.0024 0.14 12.8 0.0 2 23 436 457 435 457 0.97

10 10 0.00068 0.041 14.5 0.4 1 23 463 486 463 486 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	1.8	1.1e+02	3.7	0.4	3	23	199	220	197	220	0.87
2	10	0.00053	0.032	14.9	0.5	2	23	226	247	225	247	0.97
3	10	0.00031	0.018	15.6	0.5	1	23	253	276	253	276	0.94
4	10	0.029	1.8	9.4	0.1	2	23	283	304	282	304	0.97
5	10	1.5e-05	0.00088	19.8	1.6	1	23	311	334	311	334	0.96
6	10	1.8e-05	0.0011	19.5	1.2	1	23	340	362	340	362	0.98
7	10	5.9e-05	0.0035	17.9	7.7	1	23	368	391	368	391	0.97
8	10	0.005	0.3	11.8	0.2	1	23	408	430	408	430	0.95
9	10	0.0024	0.14	12.8	0.0	2	23	436	457	435	457	0.97
10	10	0.00068	0.041	14.5	0.4	1	23	463	486	463	486	0.97

Sequence Information

Coding Sequence: ATGGAGAAAAGGAAAGAGTCCTTAAACATAGTGAAAATGTGTCGCTTTTGTCTAACACAAAATGAAACACTGGAAAGTTTGTATGATAGGAACGGTTCAGGAAAGAATTCTCCAAATcttcatttgaaaattttatcgtGTGTTTCCATTGagatttttgccTCTGACAAAATGCCCTCATTTATTTGTCAACGCTGCAAATTCTTCATGAATCTTTTCtatgaatataagaaaatagttCGCCAAGCTGATGAAACAATCTTGCAGTATATACAACATAACTCTccaatggaaataattacatGGCCCTCAATCCTCTCTAAAgtatatcataaaatgaatgaaattgaTATTGTCAAAACTCAAGAAGGTGCTACCGTGCAAGTTTCCTCTCATGATAACTCGGATAGTGATGAAGAAGATGGAAATGTGTACAATATAAAGATTGAAGATGGTCCAGATGATGATACAAAAACTGcttgtgttaaaattattaccagTAAGgagagcaaagaaattgaaGATCCTTTGGGTAAAGAGCAACGTGAGATAGATGATGCAGTTGAAAAAGTCTTAGAAGATGGCTGCTGGGCCTGTGACGAATGTGATTGTACATATCCTCTACAACAGTTGTTGGATCTCCATAAGGCACAGAAGCACAGGGAACGCACAGTAGAGTGCGATCAGTGTGATGCAAAATTCTTcacaaaatatgatttatcgACACATCTCCTGCGTCACACTGATGAATTGCCATTCGAATGTGTGGCGTGTGGTAAGAAATTCAAAAGACTCATACTGCTTAAGCGTCATGAAAAACTCATACATTCAGACTTACCTCAGCAAGTATGTCCAAACTGTCCCGCTTCATTTTTATCTACAGAAGAATTGGAAGCTCACAAAAAGAAGCATGTTCGTATTCACCGCCCGTTTGTTTGCAACATGTGTGACAAAAAGTTTCACGAAAAATCAACGCTGCAAAGACATATAGATGTAGTGCACAACAAAGTGGCCACATACTGCTGCGAGTATTGCCCCGAGCggtTTGCATCAGTTTCCAAACTGGCGAGGCACGTGAGGACACACGCTGGTGAACGTCCTTATCCTTGCAAATTTTGTGACAAGAGCTTTTCTAAATCCCATCATTATACAAgACATTTACGCCAAACACACAGAGAAGCCAATCGCACCGGTCGCGGACCGTACGGCGAGAGCGAGCAATACCGGTGCGACCAGTGCGAGGACACCTTCACCACTCAGGACGCGCTGATATACCACTCCGCGATACACGCCACTCAGAACCTCACATGTCCGCTGTGCCAGGAGAAGTTTGAGGATGTTGATGCGGTCACTGCCCATATTAAGTCACATGTTAATGGTACGGAATTTATGTGTGATTTCTGCGAGCTAGTCTTTACTTCAAAGGAGAAACTTGATACTCACCAAGCAACAATACACGAAGAGGAAATGCTGAgtGAGACCACATGTATTGACGAGTCATCCATAGAAATGGAGTGTGACGAAGAGGAAGAAGACGATAACGCGATAAATGTAAAAGAAGAAGGTGATCACatgataattgaaattaaaaaagcagATGAATTCTTGaTAAGTAACacaaaagaagaagaagacaaacctgaaattacaaattctgaagAAAGCGAATCTGATACAATTTTAACAGACTTAGCGACGGTCGAGGCAATGTCGGTAGTGAAAAAACCAGTCAACATTGCAGAAGAAAAAGTGCCAACGTTATCGCAACCGTCATTGCAATCACACCAAATGTCATCCAAAACATCAACGTCATCATCGAAAGCTGTCGTTCAAAAAGATGCTAAATCTGTGAGCAAAGTTAATGATAGTCAGactACAAGTATAATTCGTAAAGCTGACGAAGTTAAGCGCCGAGTGGTTCTATCAACGGAGTCAGTGGAAATAGTACATACTAATCcagTTAGTGAAAAGAAGAAAGTTGCAGAGGAGAAACCAGTCACCAAAGTAGAAACAATGACTAGTGGTGGTGCTAGTGACAAATCTCTGCGTCTACTAGAGAAGGAATTACAGGATCTCAAAAGAACAAACAGCCGCACTGAAATGACAAAGACCCCAATTAAAATGGTTGATACAGTTAGAAATAAGCGCCTGCAGCTTCAAACATCCACGCCAAAGTTAAAAACTGTAGAAGAAAGGAAATTaccagttataaataaatcactagcgttggaaaagaaaatagaaaaacgtATTATTACCAAAGAGAATAAAGAACCAAAAGAAGTCAAGGAAGTTAAGAGCAGTAGCAGTAGTATTAAGGAAGAGAAGGAAAAAGAGAAAGATACACCAaagagtGTTTTCAAGAATGGTTCAGGCAGCGATAAGAGCACCTCCGAAGAAATAGTGCGTCGGTCAACGAGGCCGTCTAAAATAAAGAACTACGCAAAAATGATACGAGACCGCTCCCAAATGGACTCCGAGGAGGAGACTAGTAGCGAGGACGATGACGAATATACAGAATTTGATAGAAGTTTGGAAACTCGTACGAAGAATCGTCGCTTAAGTCAAACCAAAGTTCAAACAATAAAGTCGCCCGTGGCCACGCCGTCGCCGACGACGAACGCGCCCCGCAAGCGAGGACGCCCGAGGAAAGAACCGCCCAAGGAAGTgcCCACGAAAGTTCGGAAAGAAGATAATGAGGAAGCTGTGGAAATACAGAAAGAGAAAACCAAGAGCACAGATCAAGATTCAAGCGTATTAGAAAAGaATACTAGTAAATCTGCTTCTGATGAAAAACCCACTACACCGGATGTGATTGTCTCTCCAACTGGGCAAACATTGAAGAAGgtaCCCATTAAAGCTCTCCCACCTGGAGTGAAACCTTTGCCTTTGCCAATGAATGCTAGACCACTCGGCACAGCTGAATTGTGTGAAATGCAAATCGGCAAGAAAATGGTAAAAGTTCAAAAAATTGTCATGACCAAAGCTGAAGTGGAAGCCATGGCTAAAAAGGGACTCCTGGAAATGAAGGATGGAACAATGGTTTTGAAACATGGCATAAAGCTTCCGACGGTAGACCCGGTGGCAATTAAATCATCTTTGGTCGGACCAGatctAACAAAAGAATCTCCcagtaaaaaagataaaactgCACCTTCAAGATGTGATTTTGATGAAGAGTCACAATGA
Protein Sequence: MEKRKESLNIVKMCRFCLTQNETLESLYDRNGSGKNSPNLHLKILSCVSIEIFASDKMPSFICQRCKFFMNLFYEYKKIVRQADETILQYIQHNSPMEIITWPSILSKVYHKMNEIDIVKTQEGATVQVSSHDNSDSDEEDGNVYNIKIEDGPDDDTKTACVKIITSKESKEIEDPLGKEQREIDDAVEKVLEDGCWACDECDCTYPLQQLLDLHKAQKHRERTVECDQCDAKFFTKYDLSTHLLRHTDELPFECVACGKKFKRLILLKRHEKLIHSDLPQQVCPNCPASFLSTEELEAHKKKHVRIHRPFVCNMCDKKFHEKSTLQRHIDVVHNKVATYCCEYCPERFASVSKLARHVRTHAGERPYPCKFCDKSFSKSHHYTRHLRQTHREANRTGRGPYGESEQYRCDQCEDTFTTQDALIYHSAIHATQNLTCPLCQEKFEDVDAVTAHIKSHVNGTEFMCDFCELVFTSKEKLDTHQATIHEEEMLSETTCIDESSIEMECDEEEEDDNAINVKEEGDHMIIEIKKADEFLISNTKEEEDKPEITNSEESESDTILTDLATVEAMSVVKKPVNIAEEKVPTLSQPSLQSHQMSSKTSTSSSKAVVQKDAKSVSKVNDSQTTSIIRKADEVKRRVVLSTESVEIVHTNPVSEKKKVAEEKPVTKVETMTSGGASDKSLRLLEKELQDLKRTNSRTEMTKTPIKMVDTVRNKRLQLQTSTPKLKTVEERKLPVINKSLALEKKIEKRIITKENKEPKEVKEVKSSSSSIKEEKEKEKDTPKSVFKNGSGSDKSTSEEIVRRSTRPSKIKNYAKMIRDRSQMDSEEETSSEDDDEYTEFDRSLETRTKNRRLSQTKVQTIKSPVATPSPTTNAPRKRGRPRKEPPKEVPTKVRKEDNEEAVEIQKEKTKSTDQDSSVLEKNTSKSASDEKPTTPDVIVSPTGQTLKKVPIKALPPGVKPLPLPMNARPLGTAELCEMQIGKKMVKVQKIVMTKAEVEAMAKKGLLEMKDGTMVLKHGIKLPTVDPVAIKSSLVGPDLTKESPSKKDKTAPSRCDFDEESQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00457457;
90% Identity: iTF_00780484;
80% Identity: -