Basic Information

Insect: Heliconius aoede
Gene Symbol: -
Assembly: GCA_037355905.1
Location: JBAIZZ010000093.1:1723307-1731128[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00054 0.033 14.8 1.1 1 23 292 314 292 314 0.99

2 11 0.0019 0.11 13.1 2.0 1 23 321 343 321 343 0.99

3 11 8.7 5.2e+02 1.6 0.4 1 8 347 354 347 370 0.75

4 11 6.1e-05 0.0037 17.8 0.8 1 23 377 399 377 399 0.99

5 11 2.9e-06 0.00018 22.0 5.1 1 23 405 427 405 427 0.98

6 11 2.4e-05 0.0015 19.1 3.1 1 23 433 456 433 456 0.97

7 11 8.6e-06 0.00052 20.5 1.0 1 21 461 481 461 486 0.93

8 11 0.0069 0.41 11.3 1.1 1 23 494 517 494 517 0.92

9 11 7.4e-05 0.0044 17.5 1.1 2 23 524 546 523 546 0.96

10 11 1.5e-07 8.9e-06 26.0 0.7 2 23 565 586 564 586 0.97

11 11 0.035 2.1 9.1 0.5 5 22 595 612 592 614 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00054	0.033	14.8	1.1	1	23	292	314	292	314	0.99
2	11	0.0019	0.11	13.1	2.0	1	23	321	343	321	343	0.99
3	11	8.7	5.2e+02	1.6	0.4	1	8	347	354	347	370	0.75
4	11	6.1e-05	0.0037	17.8	0.8	1	23	377	399	377	399	0.99
5	11	2.9e-06	0.00018	22.0	5.1	1	23	405	427	405	427	0.98
6	11	2.4e-05	0.0015	19.1	3.1	1	23	433	456	433	456	0.97
7	11	8.6e-06	0.00052	20.5	1.0	1	21	461	481	461	486	0.93
8	11	0.0069	0.41	11.3	1.1	1	23	494	517	494	517	0.92
9	11	7.4e-05	0.0044	17.5	1.1	2	23	524	546	523	546	0.96
10	11	1.5e-07	8.9e-06	26.0	0.7	2	23	565	586	564	586	0.97
11	11	0.035	2.1	9.1	0.5	5	22	595	612	592	614	0.87

Sequence Information

Coding Sequence: atggaaatatgtcaAGCTTGCTTAAGAACGGGAAATTACGTTTACCCTATGACAGcagaagatttaaaatattaccagtTGCTTATGAAAAAGattgaagatccattaaatatatcatacatatgtatatactgtagaagtttattgaataaaatagtaaagttCATAAAACAATGTAAGGTTGCTGATATTTGGCTAAGGGAAAAAGTTGACAagattgatATAATACCAAATATACAAAGTAATTTAGTTCAATCAACaccttcatattattatttgggcCCAGGAAATCAATTTTCAGTTaagttagaaaatataaaacaagatgAAGTGGATGAAGATGACCTtcctttagttttattaaatggtAATAATGATTATGACAGTAACAGTGTAAATGATAATCATGATCTTGATAGTAACAGCATATTTGAGAGTGAAGATAACCAGatggataaaacatcaaaattacgatgtaatttatttcaatcaacacctacttattattattttggtccAGAAAGTCAATTTTCAGTTAAAttagaagatataaaaacagatGAAGTGAATGAAGATGATATTCCTTTAGTTTTATGGAATGAAAATCATGATTTTGGTAGTAACAGTGTACTTGAGAGTGAAGTCAAGTTGaAAAACACCCTAACTAAAGATGTTGATATTAGcacagaatttaaaaaaaacgatgaAGAACACAgttctacaaaaaaatgtaaaaaggaAGAACTTAGAGAAGGCTTCTCGTCCAGAATGGTTATGGAGACAAATGAATATGTAGTTATTAAGCTTACCAAGGAACAAattttAGAAGAAATGCAAAACTATGCAAACagtgaaaaatacaaaatgttgcCATACAAGTGTGTTAAATGCGTAAAAGGATTTAACTTTGAAGATGTTTTACAAAGTCATATGAAGAAACATTCTGAGaacAACGGTCCATTCAAATGTGAATTGTGTGAACAGTATTGTCCCAGTAAAGTATCGCTACGGGGTCATATGAAATCACATTCTTCtagGTATAAATGTAAGCTATGCAATATAATCCGTCTCTCCCGCCAACATATAATAGAGCACTACTCGTTAGAGCACGCGGCGTCGCCCGCCGTGTACAAATGTCCGGAATGCGATTACACTACGAAtaaacGTACAGCAATGCAGCGACAcgtaaaaatacattcaagAAGTGAACTACATAAATGTCACATATGtggcaaatattataaaactaaagattCGTTGAGGATTCatataatGCGCCACGATGATAAAAAACTGCACCAATGCGATATATGCAACACGTCGTTTGTTTACGCCATGCAATTGAAGAAGCATATGCATTCTGTGCACGTGCTTAAGGATTTCTACTGTGTTGAGTGTGACATTACGTTTAAATCTAGGGATAATTTGAAACGACACTTGGAACGTGCCAAAAAACACCGTGACTCATCTGCTTATAAACACGAATGCCAAACCTGCAACCAACGTTTCATATCAGTTTCCTCCCTCGCGTCGCATAACGCGCGCTCGCACGGAGGCGCGCGTCCCGTGCCCTGCGCGCACTGCGGCCGTCGGTACTGTAGCCGCGACGCGCTGCGCTGGCACGCCCGCAGTGCGCACGCGGCCGTGACAGGCGGCGGTAGTGGCGGTGGGGGTGGTGTTAGGGCGCGCGTCACTTGCGAGTTGTGTGGCAGGAGCTTCTCGCGCAAGTATGTCCTGCGCGTGCACATGCGCACACACAGCGGCGAGCGCCCGCACGCGTGCCACTGCGGCGCCGCCTTCACGCAGCGCGCCGCCCTGCGTGCTCACGCCGCCGCCAAACACGCGGTGCGTGAGTGA
Protein Sequence: MEICQACLRTGNYVYPMTAEDLKYYQLLMKKIEDPLNISYICIYCRSLLNKIVKFIKQCKVADIWLREKVDKIDIIPNIQSNLVQSTPSYYYLGPGNQFSVKLENIKQDEVDEDDLPLVLLNGNNDYDSNSVNDNHDLDSNSIFESEDNQMDKTSKLRCNLFQSTPTYYYFGPESQFSVKLEDIKTDEVNEDDIPLVLWNENHDFGSNSVLESEVKLKNTLTKDVDISTEFKKNDEEHSSTKKCKKEELREGFSSRMVMETNEYVVIKLTKEQILEEMQNYANSEKYKMLPYKCVKCVKGFNFEDVLQSHMKKHSENNGPFKCELCEQYCPSKVSLRGHMKSHSSRYKCKLCNIIRLSRQHIIEHYSLEHAASPAVYKCPECDYTTNKRTAMQRHVKIHSRSELHKCHICGKYYKTKDSLRIHIMRHDDKKLHQCDICNTSFVYAMQLKKHMHSVHVLKDFYCVECDITFKSRDNLKRHLERAKKHRDSSAYKHECQTCNQRFISVSSLASHNARSHGGARPVPCAHCGRRYCSRDALRWHARSAHAAVTGGGSGGGGGVRARVTCELCGRSFSRKYVLRVHMRTHSGERPHACHCGAAFTQRAALRAHAAAKHAVRE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00779679;
90% Identity: -
80% Identity: -