Haoe014340.1
Basic Information
- Insect
- Heliconius aoede
- Gene Symbol
- JARID2
- Assembly
- GCA_037355905.1
- Location
- JBAIZZ010000363.1:1024708-1036374[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.2e-15 8.3e-12 45.5 0.0 9 88 501 576 495 577 0.84 2 2 9 1.8e+04 -3.7 0.0 25 38 649 662 637 667 0.76
Sequence Information
- Coding Sequence
- ATGTCCTCTATTAACAGAAAAATTACGGCGCAAAGAAAATTCGCCCAAGGCGTATATGTCCCTCCACATTCGGCACAGATTACCAATCGTAAAGTTACCGATCTTGTAAAAGATCGAACAAATATAATACGCAGACAAACAACTGCGAAGGGTCTTCTAGATGCCATATCTTTGGAgaACATTCACAGGCACCAACCAGTAGTGCTTTTGGAAAGGCTGAGAAATGTTAATGCCGTCGGAAATATAATCGCAGAACCCgagaataatttgaatattactcCAAGCGTACCTATAAAATTGCTTCCACAAACGCAAACAACCGGAAGAAAtccattattaaaaagatctggacctaaaaaaaataatctaaagcGGAGTTCAAGAAACAGACAAAAAGCAAAACGTCGTAACCCTATCAGAAAAGCTGCTTCTAGAGCATCTTTGCGATGGAAAGATACTTCAACAGCTGACAACGAGTTTTCCGTCGACGATGACCAACCATTGACCTATTTTACAAGATCAGGCTCGAGGCAGCAGCAGGCTGGATCGAGAcagaattcaattaaattggGATCAAAAAAGAACAACTCAGGAATACAGTCAACTTCTGTTCAAACCGATGATGTACTTGATTATTCTATGACTGATGATGACTTGGTATTTGATTCGAGTTCCGATATTTTCACAGACGATGacgAGATGCAACCTGAACCTAGCGGTCTACGATCACGAACGACGTCGAGACGTGATGGAGCTCAACCAGGGCCAAGCGGCATGCGTGCCGGCGCCCAGGGGTCCACTAATGGTGGGGTTCATCCAGGCCCTAGGAAAAATCATGGTTGTAATGACAAAGCCAAGGACAAGGCTAAATGCGCACCACCACctggtACTGCACAACCAGGGTCCAGCGGTCTAGAATCGCGCTCCCACGCACAAATTGaaatagGTGGGATGTCTAGAGCAGAAGACCCGGAGTCTAGAAACAAGATGATACGAGTGTGGCtggaaaatggaatatttaaagttcCGAAAGTGCCGAAAGCTAGGACGTCGCAAAATTGTCCACAACCTCGGAGACATCAGCAGTCCGGTCTGCGGGCAGAATCGGAGCGCTCTACCAGCCCCTTGTCTTACGTGACGACCCACGATAACATCGAAACCGAGCAGAACATGGACACTGACGCCACCGAGGTCACGGTGTCTACCCGAAAGGATAGAATGCAAGTGTTGCTACCGAGACGCCAGCGGGTGAGGTTCGAGCGCGCCAAACTGGCTGATGCGCCCACCTTCTATCCCACCGAGGACGAATTTAAGGACCCCGTAACTTACTTTGAGAAAATAATGCCATGTGCGGCTAAATATGGTCTATGTAAGGTAGTAGCACCGCCTGGGTTCGAACCCCAGTGCAACTTAAACGACGCGATGCGCTTCACAGTATTCAATCAATATATAACAAGAGTATTCAAGAGATGGAGCTCTTTGACGAGGGAGATGTGCACTATGAGGTCCCATCTTGCTACATTGAAGATAGCTTGTACACAACCGCCCTTGctggGCGGCATGGAAGTTAATTTgccaaaattatatgaatctgtaaataataacggcggcttaaaaaatatgaacaagaAAGCTTGGACCAAAGTGGCTGAAGAGCTTAACTGTGGTAAATTATCTCACCCAGATAGGAGACTGGACCAGTTGTACATGAAGTATGTGGTGCCGTACAACTCTCTTAGCAAAAgagAGAGAAAAGAGATGATAAGAAAGGTTGAGGAGTTGTGGCAAAAAAGGCATTGGAGGATGCTTGACAGGGCATCGAATCCGCTACACACTCAAAAACACATGTTGGGAGAATCTGATTCATCTGATGACGATAGCGAGCTGGAAGATGAAAAGAGATTCCCACACTTGGTGAAGCAATTAAAAGAAGCAGAGGAATGTATCGTTAAGGGTCGTCCTATGGATCTCCTTACCTTCAAAAGGATCGCAAATAACGTTCAAAAGAGATACTTGCCCACCAGTGTCACAATAGAGGAAATAGAGACCTCCTACTGGTCGTGTGCTCTCATGGCGAAACAACACGTGTGCGTTCACAGCGCTTCTATAGAAACAAGCAGTGGGGGGTACGGCTTCACCAACAATTCAAATGAACCCTACGGCCAACATCCCTGGAATTTAAAGATGTTAAACCAAAACAATGGAAATATGCTTCGTTTACTCGGCTCTGTCGTCGGCCTGACCATCCCCACACTGCATCTGGGGATGCTCTACTCCACCAGCTGCTGGCACCGCGACCCCCACGGTCTACCATGGATGGAGTACATGCATGAGGGTCCTCAGAAAATATgGTACGGAATACCGGACGCGGAAAGCGAGAGATTCCGCAAAGCGGTGGAAATATTGTGTCCAACGTCGTgccaaaataaatctatttggCTCCCGTCCGATATCACAATGATACCACCGAACTTTTTACTAGAACATTCCGTGTCCATGTCGAAGATATTGCAAAAGCCGGGAGAGTTTGTCATTGTATTTCCCAAAGCGTACTCCTGCTCTATAGCCACGGGGTTCACTGTCTCCGAGAGTGTGTACTTTGCTTACAACCAATGGATAAATAACATCGGTCAAGTGTTTCAAGAGCTACGTGACAGCTGCGAGCCGTCCATGTTTTCTCTAGATCACCTGCTGATCTCGGCGGCGAAGGACCCGCGCGCGACCCTCGACGTGCTGGAGCTAGTGCACGCCAGCATGTCCAACATAGTGGGCACCGAGCTAGCTCACCGGGCGGCCCTCGTCAAACATGGCCTCAAGCCTCGATTTGAAAAAAGGAACAATCCAACTGGCATTGTGTGGAATATTTCGGAGGAAGACGAGTGCGAAATATGTCGcgctaatttatatttatccagGGTGAACGGGGTTTTCGACAGGGATGGCGCTCTCTGCGTCGGCCACGCCCTGCAGGTACTGGACGAACGTGTACGGGACATAAGGCGACGGAGCCAGTGTCACTACGAACTGATCGTGTACATGACGGAATCAGAACTAAAACAGATCGTTGAGAGGATCTCCAAAAGACTCGTGGACGTGAGGATGGCGGATCGCACGTGA
- Protein Sequence
- MSSINRKITAQRKFAQGVYVPPHSAQITNRKVTDLVKDRTNIIRRQTTAKGLLDAISLENIHRHQPVVLLERLRNVNAVGNIIAEPENNLNITPSVPIKLLPQTQTTGRNPLLKRSGPKKNNLKRSSRNRQKAKRRNPIRKAASRASLRWKDTSTADNEFSVDDDQPLTYFTRSGSRQQQAGSRQNSIKLGSKKNNSGIQSTSVQTDDVLDYSMTDDDLVFDSSSDIFTDDDEMQPEPSGLRSRTTSRRDGAQPGPSGMRAGAQGSTNGGVHPGPRKNHGCNDKAKDKAKCAPPPGTAQPGSSGLESRSHAQIEIGGMSRAEDPESRNKMIRVWLENGIFKVPKVPKARTSQNCPQPRRHQQSGLRAESERSTSPLSYVTTHDNIETEQNMDTDATEVTVSTRKDRMQVLLPRRQRVRFERAKLADAPTFYPTEDEFKDPVTYFEKIMPCAAKYGLCKVVAPPGFEPQCNLNDAMRFTVFNQYITRVFKRWSSLTREMCTMRSHLATLKIACTQPPLLGGMEVNLPKLYESVNNNGGLKNMNKKAWTKVAEELNCGKLSHPDRRLDQLYMKYVVPYNSLSKRERKEMIRKVEELWQKRHWRMLDRASNPLHTQKHMLGESDSSDDDSELEDEKRFPHLVKQLKEAEECIVKGRPMDLLTFKRIANNVQKRYLPTSVTIEEIETSYWSCALMAKQHVCVHSASIETSSGGYGFTNNSNEPYGQHPWNLKMLNQNNGNMLRLLGSVVGLTIPTLHLGMLYSTSCWHRDPHGLPWMEYMHEGPQKIWYGIPDAESERFRKAVEILCPTSCQNKSIWLPSDITMIPPNFLLEHSVSMSKILQKPGEFVIVFPKAYSCSIATGFTVSESVYFAYNQWINNIGQVFQELRDSCEPSMFSLDHLLISAAKDPRATLDVLELVHASMSNIVGTELAHRAALVKHGLKPRFEKRNNPTGIVWNISEEDECEICRANLYLSRVNGVFDRDGALCVGHALQVLDERVRDIRRRSQCHYELIVYMTESELKQIVERISKRLVDVRMADRT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -