Haoe009375.2
Basic Information
- Insect
- Heliconius aoede
- Gene Symbol
- retn_1
- Assembly
- GCA_037355905.1
- Location
- JBAIZZ010000237.1:177079-182900[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.8e-20 9.7e-17 61.3 0.0 16 89 7 78 1 78 0.93
Sequence Information
- Coding Sequence
- ATGGAGTTGGCGCGTGGAAGcgGCACACCAATTAATCGGCTGCCTATCATGGCGAAATCTGTATTGGATCTTTACGAGCTCTACAACCTGGTGATAGCCCGCGGAGGTCTCGTGGAGGTCATCAACAAGAAACTCTGGCAAGAGATCATCAAAGGCCTGCGTCTTCCTTCCTCTATAACTTCGGCCGCATTCACTTTACGCACACAatatatgaaatatctatatgatTACGAGTGCGAGAAGAAGAACCTGTCGACTAGGAGCGAGCTGGACGCGGCTATCGAGGGCAACAAGCGCGAGGGGCGTCGCGCCTCCGGACCGTACGATGCGCAGGCCGCCTTGGCCATGGTCAGTATTCCACCCTTAAGCCGAGTGCCAGCGTCTCTCGCGCAGTTATCCCAGCACATGCCGATGGCGGTCCCCATGGGTAATGGAGTCGCCGGGGTGCCCCGTCTTCCCCCCCTGCCGCACGCTTCGCATATGTCACAGCACGAAATGGAGTACCGCGTCAGGGAATATATGAGGATTCTACAGCAGCAACGGGATTTGATTAGGAATGGGTCAGAATCTCCTCCACCAGGACCTTCAACGTCATCTCCTAGAGAGGCGGCGTTGTCAGCGCTCGACGTGTCACGACTTACACTATGGTCActctataataacaataacagcCCACAAAGTTCCACGGACCTGGAACCACAacgCGAAGCCCTAAACCTCAGCGAGAGCCCCACGCTACCACCCCACCAACCCACCAACCAACGAAACAAGCGCGAGGCGTGCCGCTCTCCCCCGCCGCCCCCCAAGCGGCGCACGCCCATGCTCCGTGCGCCCCCCTCGCCCCCCACGCCCCCCACGCCGCCACCCGCGCGCGCTCCTACCTCCCCGCACTCGTCGCCCCCGCACGGGTCGCAAGTCAATGGCACCGTCAATAACGGAATTGGGGCTGCTTTTAAGATTACCACGCGAGGCGACGCAGAGAGCGGCGACCAACAGCTAGTGGTCACAATGGAGCTGAACGGCGTCACGTATGAGGGGGTTCTCTACCCTTCAAAGAACGGTCGGAACGGCCATCGGAATATGGtttgttaa
- Protein Sequence
- MELARGSGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGPYDAQAALAMVSIPPLSRVPASLAQLSQHMPMAVPMGNGVAGVPRLPPLPHASHMSQHEMEYRVREYMRILQQQRDLIRNGSESPPPGPSTSSPREAALSALDVSRLTLWSLYNNNNSPQSSTDLEPQREALNLSESPTLPPHQPTNQRNKREACRSPPPPPKRRTPMLRAPPSPPTPPTPPPARAPTSPHSSPPHGSQVNGTVNNGIGAAFKITTRGDAESGDQQLVVTMELNGVTYEGVLYPSKNGRNGHRNMVC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -