Hros012386.1
Basic Information
- Insect
- Hedychridium roseum
- Gene Symbol
- nfxl1_1
- Assembly
- GCA_963989215.1
- Location
- OZ022316.1:7249997-7252891[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 1.1 1e+04 -3.2 1.1 15 19 125 129 124 129 0.81 2 18 0.14 1.4e+03 -0.5 0.8 4 10 160 166 159 166 0.95 3 18 5.5e-08 0.00052 20.0 15.1 1 18 174 190 174 191 0.98 4 18 6.9e-08 0.00065 19.7 12.3 1 19 228 245 221 245 0.90 5 18 0.00083 7.8 6.7 14.3 1 19 280 299 274 299 0.91 6 18 4.1e-05 0.39 10.9 9.2 1 18 335 352 335 353 0.97 7 18 0.00079 7.5 6.8 7.0 1 12 387 398 387 398 0.94 8 18 0.81 7.6e+03 -2.8 0.8 6 10 408 412 407 412 0.91 9 18 4.3e-07 0.004 17.2 13.3 3 19 420 436 418 436 0.91 10 18 0.00067 6.3 7.0 11.9 9 19 485 495 483 495 0.90 11 18 0.0025 24 5.1 7.7 1 12 505 515 505 515 0.95 12 18 0.85 8e+03 -2.9 5.8 14 18 547 551 547 552 0.89 13 18 0.19 1.8e+03 -0.8 0.5 6 10 578 582 577 583 0.85 14 18 0.00066 6.2 7.0 5.9 1 12 588 599 588 599 0.95 15 18 0.18 1.7e+03 -0.7 1.9 5 10 613 618 613 618 0.95 16 18 0.00011 1.1 9.5 17.3 3 19 627 643 626 643 0.92 17 18 6.3e-07 0.006 16.7 12.0 1 17 688 706 688 708 0.86 18 18 0.68 6.4e+03 -2.6 1.3 5 10 737 742 737 742 0.94
Sequence Information
- Coding Sequence
- atgagaaaattcaGGCAAGCACAGGTCCACAACCAACAGGCTATTCAAAGGcatttgaaaataaacgcTGGTCTAGATTCATCGAGTGAGGAGGAAGATGGAAATGATgaagaattacaaaaaacaATGACCAAAGTTATGTCGTTGTATCAAGGGGAAAATGCAGATgtggaaaaagtattatcaTACTTAATAAATGTCTTTCAGTCTGGAGGAGCAGTCTGTCTCATATGTATAtcaatagtaaaaaaaaatgattcgATCTGgaactgtaaaaaatgtttttccttcATGCATTTACCATGTATATCACATTGGATTCGTGACAGCTTAAATTATAGGCGTGAAAAAGGCATAAACCTCTTTTGGGCATGTCCAAAGTGTCGCATGGAATATGCAGAGGATGAAATACCAAGACATTATGAGTGTTTCTGCAAGAAAACTATTGATCCTCCCTATCAACCTTGGGCTATCCCTCATTCATGTGGCGAAACATGTGAAAAAGAGCTGCAACCTCTATGTGGACACAAGTGTGTCCTGCTTTGCCACCCTGGTCCTTGCCCACCATGCGCAAAAATGGTTTCTGTTAAATGTTATTGTGGAAAGCAGCCACCCTACCCACGCCGTTGTAATTCCAAGTATTGGGGCTGTGGAAGTATTTGTGGAAAGCAATATGACTACTGCTCACATGCATGCAAAGAATTTTGTCACTCGGGTGATTGTCCACCTTGCTCTGAGACTAATGTAATTAAATGTCACTGCAAAAGTTTGGAGGAACCTAGAAAGTGTAATGAGTCTGTTTGGCACTGTACAAAACAGTGTGGCACACCACTATCATGCAATATACACAACTGCCAAGGTTACTGTCACCTTCCAGGTGACTGTGGGGACTGTCCAATAGCAACGAGTAGGACATGTCCTtgtggaaagaaaaaatacagtatATCTTGTAAGCTCCCTCAAGCACCAACTTGTGGTGATACTTGCGGTAAGTTGCTGGACTGCGGTTCGCATTATTGTAACATGCGCTGTCACACGGACCGTTGCGGTCAATGTCTTGAAGTTATAACAAAGTCCTGCCGCTGTGGAAGtcagaagaaagaaatagcATGTGTTAAAGAATTCcactgtaataaaaaatgtacccAGATGCGTCAGTGTGGTCGACACTATTGTAACAAAAAATGCTGTGATTGTCTGTTAAAGAACACGTACAATGCATGTGAGAAAATATGCGACAATGCACTAAATTGCAAGAAACACAAGTGTTCAATGCCGTGTCACAGCGGCCCTTGCTACCCTTGTACTCGAACTGACGTTATACAATGCAGATGCGGAAAAAGTAAGATCACCGTACCCTGTGGtacaagagggaaaaagatCAAACCGCCTCCGTGTAATAAGATGTGTAAAATACCTCCCATTTGTCACCACACGAAAAGCGAATCACACAAGTGTCATCATGGACCTTGTCCACCATGCAAAAAAGTTTGCGGTTTGACATACAAACGATGTGGCCACACGTGCGTGGCGACCTGTCATACAAAAGTTTGGGTGAAAATTCAGCTAAATGGGATAAATGCTCAGCCAGCAGGGCCTTGGGAAATAAGGCGCGATACGATGGAGCTACAAACTTTGCCTTGTCCTCCGTGCGAGGTGTCCGTACAAGTTACTTGTCTGGGTGAACACGAAACTCGTCCTTGGCCCTGTCACAACTCTAAACCGACCTCATGTCAGAGACCTTGCGGCAGATTGTTGCCATGTACGAATCACAATTGCGAATTAATTTGTCACAAGGTAAAAAAATTGGAGAGCGATGGGGGCACAGAATGTATGACCTGTGAGCAGCCCTGTTTGTTTCCAAGGCCTAAGGATTGCACACACACTTGTCCGAAGCCTTGTCACCCTGCTCCGTGCGATCCTTGCAAGCAGTTGGTAAAGATTTCTTGTCATTGTGGAATTAGTACGTTGTATAAACGCTGCGCTGATCTCACATCTGCTacaaaggaaaaacgagaCGAACTTTTGAAATGTGGGAATCAATGTCCAAAGaatTATTCTTGTGGGCACCGTTGCGCGGAAAATTGCCATTCAGGTCCATGTCCGAAAGCAAGTGAATGCAATAAGAAGGTGAAGATTTGGTGTAAATGTAAACGCATTAAAAGGGACTACTTTTGTACAGTTAttcaaaatgaaaacattactGTGACTTGTGACGAAACATGCCGGCGTctgaaagaggagaaagagcgCGCAAATGAAGTGGCAAGGGCACAAAGAcaaaaagacgaagaaacgcgtaataaggaagaaattgaaaagtttgaaaggaaatttaaacCGAGACGTAAGGGTAAGGAGAAACACGCGGATAAAGGATTATCTCAGGATGgaaatagtaaatatttaaagtttTGGCTCTTAGCTATAACAATAATTGTTGTGACTATAGCCATTGTGTACATGAGTATTCTGCAACTTTAG
- Protein Sequence
- MRKFRQAQVHNQQAIQRHLKINAGLDSSSEEEDGNDEELQKTMTKVMSLYQGENADVEKVLSYLINVFQSGGAVCLICISIVKKNDSIWNCKKCFSFMHLPCISHWIRDSLNYRREKGINLFWACPKCRMEYAEDEIPRHYECFCKKTIDPPYQPWAIPHSCGETCEKELQPLCGHKCVLLCHPGPCPPCAKMVSVKCYCGKQPPYPRRCNSKYWGCGSICGKQYDYCSHACKEFCHSGDCPPCSETNVIKCHCKSLEEPRKCNESVWHCTKQCGTPLSCNIHNCQGYCHLPGDCGDCPIATSRTCPCGKKKYSISCKLPQAPTCGDTCGKLLDCGSHYCNMRCHTDRCGQCLEVITKSCRCGSQKKEIACVKEFHCNKKCTQMRQCGRHYCNKKCCDCLLKNTYNACEKICDNALNCKKHKCSMPCHSGPCYPCTRTDVIQCRCGKSKITVPCGTRGKKIKPPPCNKMCKIPPICHHTKSESHKCHHGPCPPCKKVCGLTYKRCGHTCVATCHTKVWVKIQLNGINAQPAGPWEIRRDTMELQTLPCPPCEVSVQVTCLGEHETRPWPCHNSKPTSCQRPCGRLLPCTNHNCELICHKVKKLESDGGTECMTCEQPCLFPRPKDCTHTCPKPCHPAPCDPCKQLVKISCHCGISTLYKRCADLTSATKEKRDELLKCGNQCPKNYSCGHRCAENCHSGPCPKASECNKKVKIWCKCKRIKRDYFCTVIQNENITVTCDETCRRLKEEKERANEVARAQRQKDEETRNKEEIEKFERKFKPRRKGKEKHADKGLSQDGNSKYLKFWLLAITIIVVTIAIVYMSILQL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -