Hros011130.1
Basic Information
- Insect
- Hedychridium roseum
- Gene Symbol
- HIVEP1
- Assembly
- GCA_963989215.1
- Location
- OZ022315.1:2170577-2177758[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 6.8e-05 0.0057 17.1 0.6 1 23 101 123 101 123 0.98 2 9 0.021 1.7 9.3 2.1 1 21 129 149 129 153 0.86 3 9 0.00051 0.043 14.4 0.0 1 21 356 376 356 377 0.96 4 9 1.5e-06 0.00013 22.3 1.6 1 23 1102 1124 1102 1124 0.99 5 9 1.7e-05 0.0014 19.0 4.3 1 23 1130 1154 1130 1154 0.92 6 9 5.6e-07 4.7e-05 23.7 0.1 2 23 1833 1854 1832 1854 0.97 7 9 0.00082 0.069 13.7 1.8 1 23 1860 1884 1860 1884 0.92 8 9 0.0014 0.12 13.0 3.3 1 23 1905 1929 1905 1929 0.93 9 9 0.46 39 5.1 1.3 1 19 2087 2105 2087 2110 0.94
Sequence Information
- Coding Sequence
- ATGACAGACCCACAGTTGAcgaacaacaacaacaacaataataacaacaataacaacaacaacaacaacaacgatgGCGAGCCAAAATACCTGCACAAGAAGTTCAAGAAGATGGCGACGACGGAGGTGTCGCCGAAGGTGGAGCCGAAGAAGGAGAATAGCGGCAACGACGGAACTTCCCCTGAGACCCCGAAGAGGCGAGACTCGTCCAAGGAGTCCAGGGCATCCCCCAAGGACCCGATCAAGGCCGAAGCCTCGCCGGAATCTGAGCCCGAGCACGCTGAGTCCCGGAAAAGTGGCTACGTTTGTCCCTACTGCAAACTTTCCTGTGCCAAACCTAGTGTTCTCCAAAAACACATCAGGGCCCACACAAACGAACGGCCCTACCCCTGCGTGCCCTGCGGATTCGCCTTCAAAACGAAATCGAATCTTTACAAGCACTGCAGGTCGCGGGCACATGCTCTCAAGATGGAAGGTGGCGATGCCAGCAAGGTGTCGGAGGATTCGGATATAAGCCTGTCGGACAGCGCGAGCAACGGTACAGGAaccccaccaccacctccagCGTCGACACCGACGAGCACCGCTTCTAGCAGCACCCCGGCTACTTCGACCGTGAAAACCGTGAAGACAGGGAGGATCTACAAGCCGAAGTTCCACACGGCCTTGCAGTGCGTTAATAATGACGCGGAATCGTCTTCAGCGTCGACCTGCTCGGCCAGCAGTTCAACATCGACGACGACCGTGTCGACTCCGAAGCCCAATCCGGAACGTCTTCAGGAACACATCGACAAGATCATCACGGATAATCAAGCGATCGTCGATGCGGTTGACCCGAGGCTGCATAAACTCATGCAACGTCAGCAGAGTCTTGTGGAGACGAAACAACCGGAACAACCCCTTAATCTCTCGTCCGCGGAGGAAACGTCAGCGAGGAAACGTTGTTACAGCGAAAGTTTCGCCACGGAGACGAAGGACCGTCCTCAGTCGTCAGAGGGATCGATCATCAAGGATCTTCTGCTGAAAACTCGGCCAGAGTCTGACGCTGCCGCGGAAAACGAGAATTTTGTCTGTCCTTCTTGCAACATACCTTACACTAGCGCTGACAATCTAGAAGCTCACCGCAGGTATTACTGCAAAGGACCTGTCAGTCCCCGAAGACCGGACTATCACTTGGACCTGGAGAAGAGGGAGACTGATTTCGATGGGAGTCTTCCGACGGGGTCTTCCGATTACTACAGCACTCTTCAGCCTCTGCCCTCTCCTGGTCCTCTTCTCGGTAACACGAGACTCGTCGATCCGTACGCTCCGCCGGCGAAGAAGCAAAGGTTAGAGTCCGTTCCGACTACCTTGCGCTCCTTGGAGGAGCTGTCCAAGTACCCGAGGCCAAATTCCCTTCAGATGTTCGGCGGGGAGGTCCGGATACTGGACAACACCGGGGAAACGAAGACTATGAGAATCGAACCGCGCCAGTCGAACTCACCGTCGAGCGAGCATATAGTGAGCAGCAAGTGTGCTACGTCAGAAACTGCGTCGATTGTCGTGAGGTCGGGACTTCATTCCGGCGGTACGATGGTCCACAAATCGTCTAGTGTACCTGCCAGCACGCCGAGTTCCTCCATATCGTTGCCGAACACGCCAAAGTTGTTGGCGCCCATCATACCGAACATATCAACCCCCAGTTTAGCGCCCACGATGTCGTGTTACAATTACCTCGAGCCTCACCTCAATCCTCTGACGAGCATCACTGCCTACAACCCTCTGACGCTGCCCCAACCGGGAATCACGAGTATCCTTCATGGTGGCAAGGTCATACCTTACGTACCTGGCATGCCCGGGCCACATACCTTGGCTGGTGCACCGACGATAGACATATCACCGAGCATTGCGTCCGGTGACACGAGTTACAAAGTGATACCCGGCTTGCCAGGTCTCCACATGGTCCCACAACCTTTGGACCTTGCCAGTCCTGTCAAGGTACAAACTCCTAATGTCCCCGGTATACCTGGACCAATAACAGGGCACTCGAACAACCTCGGTCAGCCATTGGACCTGGTCACACCAACGAAGGACTCCAAGGTCGGCTTCAAGGCTCCCAATGGAGAAGGAGTGGTTGGTCTTAGGACTGGTCTAACGAGCCCAAAAATTCCTAGCGTCAAGGTCGAGACAACTGGGGATAAGTATCGGGGAAGACTGCCGTCGACTCCCACCGGTGAACTCACGAAAATGGAACTTGATCGTCATATCAAGAGTAGCGTAGCTATGAAGTACAAAAATCTGGAAAGTCCACGTGAGAGGCGGGAGTATTCCTACGAGCGGAGCCCAAAAAGCGAGAAAACATTCTGCTACCCAAATGGAGTCGACGGTGCTATCAATTCGCCGAACTCATATGGTAAATTCGCGTATTCACCAAAGGCGTCTTCCGAGAGCAGGAAAAGGCCGTCAAGCTGGAGCGTGAATGAATTGGAAAGCAGCAGAACGTCTATTGAGTCCGTCAGTCCCATCTCGAAATACGACTCTCCACCTCCTCACGAAAACGGTCGGGTGAAACTCAGTTTTCCTGAAACGAGGGGGAAACCGATTGAGGGTTACGGCACGGTAAACGGCTCTAGACTGAAAATAGATACCGTTCCGCCGGTGATACTCGTCAACTTGGATTCCGCCAAGACAGAAGTGCCAAGCAAGACTTCCGTAGAGTTAGTTGTTAAGTCGGATAAGCCCGAAGCGAAGTCTCCGAAAATCGGGGAACTCGATGCTGAAGAAACCAGCGCTAATAAATTCTTAAGACCCACTTCCCTACCACTAAAACCTGGGACCTTCACTCCGAAGAAACACCATGGTATCACGCCCACGGCGAACACTCTTCCTTTGATTAGCCCCGAAACGCCACGCCCAAGAAAGTCATACGGCCAGTTGTACCTCAATGGACACGCTTATACGTACCTGGGCCTTAAGTGTTCGACTAGAGTGTTTTACTGTACTCTCAATCGACCTCAGCCGATGTACGTCACCCAGCAACACGGTTTGTCCATGTATTCGAACtggaaaatttgtaaagaagCACCCCCTGACCTGGATATGGCCCATTACGACTCGAGACATAGACCCGCCAACTACACGACAGCCTGCAAGAAGCAGGAcgatattttaacgcattcctcTCAGAGACCCACCACCCCTAACAGCACTGACAGTGGACTTGAAAGTGACATGCAGGAAAAGGCGAAAAGAGTGAAGATTTTCGATGGAGGGTTCGAGAGCAATGAAGATTATACATATGTCAGAGGACGAGGTCGGGGAAGGTACGTGTGTGAGGAATGTGGTATTCGATGTAAAAAGCCATCTATGCTGAAGAAACATATCAGAACACATACAGACGTGAGGCCATACACTTGCAAACACTGTGCTTTTAGtTTCAAAACTAAGGGTAACCTGACAAAGCATATGAAATCGAAAGCTCATTACAAGAAATGTGTGGAACTTGGGGTAGTACCAGTGCCTACGACGGTGCgagatgaaaatattgataaagaTGCCATTGCCCGATTAGCAGCCGGTGGAAATACAGAAGATTCAtcggaagaggaagaggaaagcGACGGAGATGAGAGCGAAGAATCTGGAAGTGAAGAACAGGAAGCAGCACAAAGCTTACTGAGCTTGTCTCAACGTAATGCCAACAGATTGCCAGGGCTGTTGCCTTCCGGAAGACCGACAACCTATCCGTATACTTTGACCTTGCCTACAACTACAGTCCCTTCCAGTGTTGCTGCCGTAACAGTCACTACTACTTGTTTGAGTAGTCAAGCCAGTGTTAGTCAAAGTACTCCGCTCATTCAGAGCGACATGCCTCATCGCTATTACTTCCCCTCGAATAGAAGTGTTCCAGAGGAGACTAGAACCAGTGTCATTCACTCCTCTAAAAAGGATGAATCCGACATCGAGGTCGAAGAAATCACCGGGATTGATTCCTCTCAACATTTACCACAACCCATGGACCTTACGACGAAACAAACGGTACAATCTCTGCCGTCTCCCATTCCGCAAAGAGCCAAGCCAGCGGATATCTTAACGCCCGTTTCTGAACCGGTCTTGTTACAGACGATCGTTCAGACGATGGAGCGATTACCTATTCAGGGCAGAGAGTGGAAACCAGACGCCGATGGTCATATGCTACAAGCCTATCTTACCGAGAGACACGTCATGGACAGTAAAATTAAACAGCAGTACCGTGTAGGCTGTACGAACGTGGAAAAGCCTATCAATGATAGAGACTCGTACCTGAAACATCAAGATCCTTCGAGATCGAGGCCCATGGAATCCAATGTGATTCCAACCGTGACGTACACCGATCCTAGTAGAATGCAACAGAGCGTAGTTGATGGTAAGATAAAAAACACGGCCAAACACATTGCGGAAGATGTTAAAATGGAGATACGAGAGAAAATCTATCAAAACAATGTGGCAATCGAACGAAGGTTTGAATTGGAACCAGTTCATAGAGATAAAGAACTGGTAAACCGATCATTCTTAGAGAGGGATGGTTACGAACGTAATTTAACGAGTCCTGCTGGCGCAAGGTTGAGTGGCGATTACACTCAGTCACCTATCTGCAAGGGTAACAGTTTGGTCGACAGAGTAAATCATCCCTTGGAATCCCCCACTCGAATCGTGCCCGTGGCTGATCAGCATTCGCCGAAAAGTTTCAACTTGGACGTGAACAGTAGACACGCACCGATGTCACACCctaataatgaaattgatcGAAGCTCGATGTTCAACGCGATGAAAATGATGAGCGAAATAGAGAGACCTCGGGAATGTCAGCCGATCGTTCAGGAACTGAGGCCACCGAGTCATGAGGCGAGAACGGATCTTCGCGCGCACAACCAAAGCCCACGTAATTTGGATTTGAGGCCGCCTAGCAGGGAGATCAGGGTGCCCAGTCAAGATTACAGAGCTCAGGGCCAAGAACTAAGACTGGGAAGTCAAGACTACAAATTACGGGGTCAGGAACTGAGGCCACCCAGTCGCGAGTTCAAGCCACTCAATCATGAGTTACGAGTACATCAGGATCTTCCCGCCAGCGCGAATATTGAAATGCGCCAGGTGAATTCCGAAGGCAGACCGCCTAGTAGGGATTCCAGGTTGGTGTCAGAGTACAGACCTCCACTTCAAGATCCGAGACCAAACTTCGAAGTTCTCCAACCACCCATCCATGATCCGGCCAAACTGCAAGAAAGTCCAAGGCCACCAATTAATGATATTCGTAACGTTGACCGAATCGATATAAAACACAACATAGAAATGGCTAAGCCGGGCATAGCGGAGAACATGAAACACACTGTGGCGCGGAAAATGGTGGTGGGGGGTCCAGGTTTCAGGTCACCTTCACCTACGACGGGAAGTGCCAAACCACAGGCGGCATTTTTGCAACCCTCCAGTGGCCCAGCGCCTAATTACGTTAGTTACAGTGTAACGGAGGATGGTCGTAGTGTGTGCGGAATTTGTAACAAAGTGTTCAGCAGGCCTAGTCAGCTACGGTTGCATATCAACATTCATTATTTCGAGCGACCATTTAGGTGTGAAAGTTGCGCAGTTTCCTTCAGAACCAAAGGTCATTTGACGAAGCACGAAAGATCCGTCTCCCATCATAATAAGGTCAGTATGACGTCCACCTTTGGAGCTGCCACCACTAGTAATCCAAGGCCGTTCAAGTGCACAGACTGTAAAATAGCATTCAGAATACACGGACATTTAGCGAAGCATCTTCGCAGTAAAATGCATATTATGAAATTAGAATGTTTGGGCAAATTGCCCTTTGGAACTTATGCCGAGATGGAAAGGTCCGGGGTAAATCTAAATGACATAGATACTACAGACTGTGATAATAGTCTTACTAGTCTCCAGATTTTGGCTCAACGCCTATGTGAAAAAGATCCGAACAAAATGGGACAATGGGAAGGGGAAACTATGCCGAGTCAAACCATCAGCGGCGGTGACACTTCGTCTGATGAAGGTGAGCCTATACCGCATCACGCGATCCATCAGTATCCCGGGAAAGGAATAACCGATACAGAAGTATCACGATCATATCATGTGCCAATCatcaatgaagaaaaaaacatCGGAGACCCGTCAACTCGCCTCGGTAATTCTTCCTTCagccaacagaggcgggagTACAGTCCGAAAGATAAGCCAAATCAATGTGTAAATCCTACAGAAGAGGCGCAATCAGATGAAAATTTACAGTTGTACAAGTGCCAAGTTTGCACAGTATCTACGCGCACTGTTAACGAATTACAGGTACATTGTTTTGTTGAACATAATATCGAAACGAATTCTAGTACAAATGCGTACGGGGGAAAAGTTACGAGTGAGTGtagagaaaaagagaatacTCAAAAAAGAATGACTGAAGAATCTGCTGTCAAAGAGGATCACAGGCAAAAGGTGCACGATACGTAG
- Protein Sequence
- MTDPQLTNNNNNNNNNNNNNNNNNDGEPKYLHKKFKKMATTEVSPKVEPKKENSGNDGTSPETPKRRDSSKESRASPKDPIKAEASPESEPEHAESRKSGYVCPYCKLSCAKPSVLQKHIRAHTNERPYPCVPCGFAFKTKSNLYKHCRSRAHALKMEGGDASKVSEDSDISLSDSASNGTGTPPPPPASTPTSTASSSTPATSTVKTVKTGRIYKPKFHTALQCVNNDAESSSASTCSASSSTSTTTVSTPKPNPERLQEHIDKIITDNQAIVDAVDPRLHKLMQRQQSLVETKQPEQPLNLSSAEETSARKRCYSESFATETKDRPQSSEGSIIKDLLLKTRPESDAAAENENFVCPSCNIPYTSADNLEAHRRYYCKGPVSPRRPDYHLDLEKRETDFDGSLPTGSSDYYSTLQPLPSPGPLLGNTRLVDPYAPPAKKQRLESVPTTLRSLEELSKYPRPNSLQMFGGEVRILDNTGETKTMRIEPRQSNSPSSEHIVSSKCATSETASIVVRSGLHSGGTMVHKSSSVPASTPSSSISLPNTPKLLAPIIPNISTPSLAPTMSCYNYLEPHLNPLTSITAYNPLTLPQPGITSILHGGKVIPYVPGMPGPHTLAGAPTIDISPSIASGDTSYKVIPGLPGLHMVPQPLDLASPVKVQTPNVPGIPGPITGHSNNLGQPLDLVTPTKDSKVGFKAPNGEGVVGLRTGLTSPKIPSVKVETTGDKYRGRLPSTPTGELTKMELDRHIKSSVAMKYKNLESPRERREYSYERSPKSEKTFCYPNGVDGAINSPNSYGKFAYSPKASSESRKRPSSWSVNELESSRTSIESVSPISKYDSPPPHENGRVKLSFPETRGKPIEGYGTVNGSRLKIDTVPPVILVNLDSAKTEVPSKTSVELVVKSDKPEAKSPKIGELDAEETSANKFLRPTSLPLKPGTFTPKKHHGITPTANTLPLISPETPRPRKSYGQLYLNGHAYTYLGLKCSTRVFYCTLNRPQPMYVTQQHGLSMYSNWKICKEAPPDLDMAHYDSRHRPANYTTACKKQDDILTHSSQRPTTPNSTDSGLESDMQEKAKRVKIFDGGFESNEDYTYVRGRGRGRYVCEECGIRCKKPSMLKKHIRTHTDVRPYTCKHCAFSFKTKGNLTKHMKSKAHYKKCVELGVVPVPTTVRDENIDKDAIARLAAGGNTEDSSEEEEESDGDESEESGSEEQEAAQSLLSLSQRNANRLPGLLPSGRPTTYPYTLTLPTTTVPSSVAAVTVTTTCLSSQASVSQSTPLIQSDMPHRYYFPSNRSVPEETRTSVIHSSKKDESDIEVEEITGIDSSQHLPQPMDLTTKQTVQSLPSPIPQRAKPADILTPVSEPVLLQTIVQTMERLPIQGREWKPDADGHMLQAYLTERHVMDSKIKQQYRVGCTNVEKPINDRDSYLKHQDPSRSRPMESNVIPTVTYTDPSRMQQSVVDGKIKNTAKHIAEDVKMEIREKIYQNNVAIERRFELEPVHRDKELVNRSFLERDGYERNLTSPAGARLSGDYTQSPICKGNSLVDRVNHPLESPTRIVPVADQHSPKSFNLDVNSRHAPMSHPNNEIDRSSMFNAMKMMSEIERPRECQPIVQELRPPSHEARTDLRAHNQSPRNLDLRPPSREIRVPSQDYRAQGQELRLGSQDYKLRGQELRPPSREFKPLNHELRVHQDLPASANIEMRQVNSEGRPPSRDSRLVSEYRPPLQDPRPNFEVLQPPIHDPAKLQESPRPPINDIRNVDRIDIKHNIEMAKPGIAENMKHTVARKMVVGGPGFRSPSPTTGSAKPQAAFLQPSSGPAPNYVSYSVTEDGRSVCGICNKVFSRPSQLRLHINIHYFERPFRCESCAVSFRTKGHLTKHERSVSHHNKVSMTSTFGAATTSNPRPFKCTDCKIAFRIHGHLAKHLRSKMHIMKLECLGKLPFGTYAEMERSGVNLNDIDTTDCDNSLTSLQILAQRLCEKDPNKMGQWEGETMPSQTISGGDTSSDEGEPIPHHAIHQYPGKGITDTEVSRSYHVPIINEEKNIGDPSTRLGNSSFSQQRREYSPKDKPNQCVNPTEEAQSDENLQLYKCQVCTVSTRTVNELQVHCFVEHNIETNSSTNAYGGKVTSECREKENTQKRMTEESAVKEDHRQKVHDT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -