Basic Information

Insect: Hedychridium roseum
Gene Symbol: ttk
Assembly: GCA_963989215.1
Location: OZ022322.1:169233-172985[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 1.3e-07 1.1e-05 25.6 1.4 1 23 347 369 347 369 0.98

2 8 1.7e-05 0.0015 19.0 2.0 1 23 375 397 375 397 0.98

3 8 1.1e-06 9.1e-05 22.8 0.3 2 23 406 427 406 427 0.98

4 8 3.6e-05 0.003 18.0 0.1 3 23 435 455 433 455 0.97

5 8 1.1e-07 9.5e-06 25.9 3.0 1 23 461 483 461 483 0.98

6 8 2.4e-06 0.0002 21.7 2.1 1 23 489 511 489 511 0.98

7 8 4.1e-05 0.0035 17.8 7.5 1 23 517 539 517 539 0.98

8 8 5.1e-05 0.0043 17.5 1.7 1 21 545 565 545 566 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	1.3e-07	1.1e-05	25.6	1.4	1	23	347	369	347	369	0.98
2	8	1.7e-05	0.0015	19.0	2.0	1	23	375	397	375	397	0.98
3	8	1.1e-06	9.1e-05	22.8	0.3	2	23	406	427	406	427	0.98
4	8	3.6e-05	0.003	18.0	0.1	3	23	435	455	433	455	0.97
5	8	1.1e-07	9.5e-06	25.9	3.0	1	23	461	483	461	483	0.98
6	8	2.4e-06	0.0002	21.7	2.1	1	23	489	511	489	511	0.98
7	8	4.1e-05	0.0035	17.8	7.5	1	23	517	539	517	539	0.98
8	8	5.1e-05	0.0043	17.5	1.7	1	21	545	565	545	566	0.94

Sequence Information

Coding Sequence: ATGGGAGAGGTCGTACGACTTTCCGGAAAGATCCCGGACACGGCGGAACTTTTGAGGGAAGCAATGCTGTCCCAGAGATTCGCCGACGTGGCCCTTTGCTGCACGGGGGGCCAGCGTTTCCTGGCCCATCGGCTCGTCCTCTCCGCCGTCAGTCCTTATCTCCAGGAGGTTTTGCTGGCCCACAGCAAAGCCGGAAACTGTGAGCCAACGACCGTCGTTATCCTACCGGAAGTCGAGGCTGCGGAACTGGCCTCCCTTCTAGGATTCGTCTACACCGGAACCGCCATGGTACCCCGGCCTCGTTTAGACGCTTTTCTACGTGCCGCCGAAACCCTGCGAATTCCTTTGCCACCCCTTCCGCCAATAGTTGAGGAGGAAAGCAAGTTGAGCCATCGATACGCCCAATGCCATCGGTTTTCCCTCTGCGCCGGCTGTTGTTTTCCAAGGAAGCAACAATTGGAAAAGCTTTCCCCTCAGCAGACACTCCCGGGTTACACGGTGGCCAATAGCCCCGCCTATTCAAACGAAGGCTTCCCGGGACCAATAGACCGTGAACCTCTGAATCAACTGGGGATCCTCGAGGAGGAATACGTGGACGTGACGGGCTCGGATGACGAATCGGCGAGGAATCAAGGCCAGAAAGGGAGTTTCCCGGCTTACAGCGAACCGTCCGGTGAGGATCTTAGCTGCAGGGAGATCTGCTGCGAATGGAGACGAGCCAAACGCAGCGTAGTCTCCAACTGCGTGACCGCCTCACCCTGGGAACAGATCGTCCGGCTTCATCATTCACCGAGGAGTCGGCACGGGCCAGCGCACAGTCagGAGGAGAAGCCGATCTTACCTCCGAGTTCCGGCAAGCTCGAAATTTCTCATCCCGTTAGCCGCCTATGCGACACTATTGACGCAGATCGAACCGCCTCGAAAGACGAAACAATCGAGGAGGCAAAGGAGAAAGAGCTCGTCAAGAGCGACGACAACAACAACCACCAGCAGCACCCCGTGATAATACCCCAAGGCCCTAGGATATCGAGGAATGAACACAAATGCGAGGAATGCGGCAAGACCTTCGTCACGAGGGCGTCTCTGAAGGTTCACGGGAGAACTCACACAGGCGAGAAACCCTTCCGCTGTGCCGACTGCGGCAAGCAATTCTCCCAGCTCCGAAATTACAAGTATCATCGCAGCGTCCACGAGGGCACAAGGGAATTTGCCGCGACCTGCCCCGAGTGCGGAAAGTACTTTAACGACCGCGGTTACCTTAGCTCGCACATGAAGATCCACCGGAACCGGAAGGAATACGGCTGCGCCGAGTGCGGCAAGAGTTTTAATCAGAGAGTAGCCTACAATATGCACGTGAGGATCCACACGGGCCTCAAGCCCCACCAGTGCGAGCAGTGCGGCAAGGCATTCTCCAGGAAGATGCTGCTCAAGCAACACTTGAGAACGCATTCCGGGGAACGACCTTATCAGTGCCAGGTCTGCCACAAGGCCTTCGCCGACAGGTCCAACATGACGCTGCACACGAGGCTGCACTCCGGCCTCAAGCCTTATCAATGCACGCTCTGCTCAAAGGCTTTCACCAAGAAGCATCATCTCAAGACCCACCTCAACTATCACACCGGTACCAAACCCTACTCCTGCAGCAACTGCGGCCTCAGGTTCTCGCAGAGCAGCAACATGAGGACCCACTTCAAGAAGTGTACCGTCAATAATCCCAGCGGGACCAAGAGCTCCGACGCAGCTGGGCTTACTCCTCCCAACTCCGATCAAGAGTCAAGCGTCTTAACACCTGTACCGACGTAG
Protein Sequence: MGEVVRLSGKIPDTAELLREAMLSQRFADVALCCTGGQRFLAHRLVLSAVSPYLQEVLLAHSKAGNCEPTTVVILPEVEAAELASLLGFVYTGTAMVPRPRLDAFLRAAETLRIPLPPLPPIVEEESKLSHRYAQCHRFSLCAGCCFPRKQQLEKLSPQQTLPGYTVANSPAYSNEGFPGPIDREPLNQLGILEEEYVDVTGSDDESARNQGQKGSFPAYSEPSGEDLSCREICCEWRRAKRSVVSNCVTASPWEQIVRLHHSPRSRHGPAHSQEEKPILPPSSGKLEISHPVSRLCDTIDADRTASKDETIEEAKEKELVKSDDNNNHQQHPVIIPQGPRISRNEHKCEECGKTFVTRASLKVHGRTHTGEKPFRCADCGKQFSQLRNYKYHRSVHEGTREFAATCPECGKYFNDRGYLSSHMKIHRNRKEYGCAECGKSFNQRVAYNMHVRIHTGLKPHQCEQCGKAFSRKMLLKQHLRTHSGERPYQCQVCHKAFADRSNMTLHTRLHSGLKPYQCTLCSKAFTKKHHLKTHLNYHTGTKPYSCSNCGLRFSQSSNMRTHFKKCTVNNPSGTKSSDAAGLTPPNSDQESSVLTPVPT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00773939;
90% Identity: iTF_00773939;
80% Identity: iTF_00773939;