Hsal039069.1
Basic Information
- Insect
- Hedya salicella
- Gene Symbol
- nfxl1_1
- Assembly
- GCA_905404275.1
- Location
- FR990116.1:736690-739161[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 2 4.8e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 21 0.014 3.4e+02 2.7 0.7 4 10 169 175 168 175 0.97 3 21 3.1e-07 0.0074 17.6 15.9 3 19 186 202 185 202 0.95 4 21 4.7e-06 0.11 13.9 11.4 3 19 239 255 236 255 0.92 5 21 0.58 1.4e+04 -2.4 2.0 6 10 280 284 279 285 0.77 6 21 6.6e-08 0.0016 19.8 12.8 1 19 290 308 290 308 0.98 7 21 1.1e-07 0.0026 19.1 17.5 3 19 345 361 337 361 0.86 8 21 1.9 4.6e+04 -4.1 0.9 1 4 370 373 370 373 0.95 9 21 2 4.8e+04 -5.3 2.2 5 10 384 389 384 389 0.88 10 21 6e-06 0.14 13.5 18.3 1 18 395 412 395 413 0.97 11 21 1.9e-08 0.00046 21.5 15.9 1 19 422 440 422 440 0.99 12 21 7.8e-05 1.8 10.0 5.1 9 19 488 498 486 498 0.89 13 21 0.024 5.7e+02 2.0 1.0 6 12 497 503 497 504 0.92 14 21 0.015 3.6e+02 2.7 5.5 3 11 509 517 508 518 0.88 15 21 0.37 8.8e+03 -1.8 3.3 14 18 547 551 547 552 0.85 16 21 0.36 8.7e+03 -1.7 1.2 8 12 568 572 567 582 0.79 17 21 0.00093 22 6.5 5.0 1 11 588 598 588 599 0.95 18 21 0.84 2e+04 -2.9 1.5 15 18 613 616 612 617 0.82 19 21 0.00046 11 7.5 13.0 1 18 628 645 628 646 0.85 20 21 2 4.8e+04 -6.5 3.4 9 13 652 656 652 656 0.71 21 21 6.2e-06 0.15 13.5 12.1 1 18 687 705 687 706 0.89
Sequence Information
- Coding Sequence
- ATGGCCCGGCGATATCGCGACGCAGCTGCTAAATTGCAGCAAAATgttcaaaaacatttaaaggggATGAAAGAACTATCGTCGTCCGAAGATGAAGAGCCGTACGAGTCCAGCGTTCTGGAGGGAGTGCTGCAGAGCTACCGGAACGGTGGCGGCGACGCGCACATGCTCAATCGTACGAAGAACATGCTGGAGGAAGCTATAAGCGGCCGTAACGTGACTTGTCTAATTTGCATAGGTTCCATCAAGCGCGCCCATGCCATCTGGACCTGCGACCACTGCCACTCATATTTCCATCTCTCTTGTATCCAGAAATGGTCCAACGACAGCATCAGCCTTCGAAGCGAAGAGAACCACGGCCCCATCGCGGTGTTTGTGCCTAAGAAAATCGAATGGTGCTGCCCCAAGTGCCGGCAGTCGTATAGTAAAGAGGAAATACCTCGCAAGTACCGCTGCTTCTGTACTAAGACTGATGACCCTCCATTCCATCCATGGTTGATACCACATACATGTGGAGAAGTATGTGAAAAAAGATTGTCAACAGGTGATAATTGCAAGCATAAATGTCTATTGCTTTGCCATCCCGGGCCGTGCCCACCTTGCCCACAGACTGTTAATGGTGTATGTTTCTGTGAAAAAGAGAGGAAGCGAGTTCGGTGCAGTGCTGCCAAATGGTCTTGTGGCCAACAGTGTCAGAGAATACTCTCCTGCAGATCCCACAAGTGTGAAAATCTGTGCCATCAAGATGCCTGTCCGCCGTGCACCTACACCAGCGTCCAGGCATGTTTGTGCGGGGCTGAAAAAGTTAAACGGCCCTGTAATGATCCTCGATGGCAATGCCAGAAGCCTTGTAAGAAGCCATTTTCATGTGGTTATCATAAGTGTGAAGAAATATGTCATTCCGGGGGCTGCACCGATTGCCCTAACTCAGGCATGCAATCCTGTCCTTGTGGAGCTAATCAACGTTTTGTTCAGTGTCCTGATGTCATGGAGACCTGTCTGGGCACCTGTGGAAAGACCCAGAGCTATTGTGAGCACACTTGCCCTGAGAAATGCCACAAAGGTCCCTGTCCTCCTTGTCAAGTGCTGATAGAAAAAAAGTGTCAGTGTGGCAGCCATGTAAGATCCTTACCATGCAGTAAGGAATATAAATGTGAAACAAAATGCAGGGGCATAAGGCCATGCGGGAAACATGGCTGTGCGAGAAAGTGCTGCAATGGGAACTGTCCTCCATGTGAGAAAATCTGTGACAAACCACTGCAGTGCGGTCGTCATAAGTGCACTATAGTTTGCCATCATGGCCCATGCTACCCATGCCCTAGAGAATCCAAAGTAACTTGCCGCTGTAAAGATACCTATGTAACAGTTCCATGTGGAAGAGAAAAGCACACTAAACCACCTAAGTGCAATCTTTTGTgcaaacttaaatataaatgtggACATATAGAAGAAAACAAGCATTCTTGTCATTTTGGTGACTGCCCACCTTGTAAGGCAATATGCCATAAACAATATGAGAAATGTGAGCATGACTGCAAAGCTGTCTGCCACGCGTTTGTGACAGTAGTATTTAAACAGGTTGAGAAGCCTGCTACACCCTGGGAAGTGCAACCACCGAAGACCAAAGTGATGACTCTTGAATGTCCACCGTGTGAGATCCCTGTCCCGATTATCTGCTTCGGGGAACATGAGACAGCAGATCAGCCATGTCATTCGGCGTCGCGTCGGCCGTGCGGCCGCGAGTGTAGCCGCGAGCTCCCTTGCACCAGACACAAATGCAAACTATTATGCCATTTGTACAAGCCTGATGGCAACTATCCTAATGTTCCTTCGTCATGTGAGCCTTGTAATAGAGAATGTCTAATACCTAGACCAGACAAATGTAGCCACAAGTGTGCTACAGGAATATGCCATCCAGGTGCATGTCCATCCTGTGAAGTGATTGAAAGAATCCCATGTCATTGCGGAGTAACTGAGCTGTACTTACGATGCCGTGAACTTAGTATAGCTACAGAAGAAATGCTGTCATGCAAACAGCAGTGTCCCAAGAATTTGGAGTGTGGTCACAGATGCAGGAACTTATGCCACCGAGGTTCCTGTGGGCAGCAGGTCTGCACCAAGAAAACCAAAGTCTACTGTCCCTGTGGGAACTTGAAGAAAGAAGCTGCTTGCAATCTTGTTAGGAGTGGGGAAGGTAAACCAGCCTGCGACTCAACTTGTGAACAAAAACGCATCGCAACTCAgttagaaaaagaaaaagaagagcAGAGAAGGAGAGAGATCGAGCAAGAGAAAAATCGCAAGGAATTAGCAGAATATGAATGGAAGTTGAGTgggaagaagaaaaaatataaggaaaagAAGGTTGTGACCGACAGAGATGACCGAAATGTGCTGCAAAAGTATTGGATTCCTGTAACCTCAGTCTTAATTGTTATAATGGCGGgtgtttatttcatattttatgtttag
- Protein Sequence
- MARRYRDAAAKLQQNVQKHLKGMKELSSSEDEEPYESSVLEGVLQSYRNGGGDAHMLNRTKNMLEEAISGRNVTCLICIGSIKRAHAIWTCDHCHSYFHLSCIQKWSNDSISLRSEENHGPIAVFVPKKIEWCCPKCRQSYSKEEIPRKYRCFCTKTDDPPFHPWLIPHTCGEVCEKRLSTGDNCKHKCLLLCHPGPCPPCPQTVNGVCFCEKERKRVRCSAAKWSCGQQCQRILSCRSHKCENLCHQDACPPCTYTSVQACLCGAEKVKRPCNDPRWQCQKPCKKPFSCGYHKCEEICHSGGCTDCPNSGMQSCPCGANQRFVQCPDVMETCLGTCGKTQSYCEHTCPEKCHKGPCPPCQVLIEKKCQCGSHVRSLPCSKEYKCETKCRGIRPCGKHGCARKCCNGNCPPCEKICDKPLQCGRHKCTIVCHHGPCYPCPRESKVTCRCKDTYVTVPCGREKHTKPPKCNLLCKLKYKCGHIEENKHSCHFGDCPPCKAICHKQYEKCEHDCKAVCHAFVTVVFKQVEKPATPWEVQPPKTKVMTLECPPCEIPVPIICFGEHETADQPCHSASRRPCGRECSRELPCTRHKCKLLCHLYKPDGNYPNVPSSCEPCNRECLIPRPDKCSHKCATGICHPGACPSCEVIERIPCHCGVTELYLRCRELSIATEEMLSCKQQCPKNLECGHRCRNLCHRGSCGQQVCTKKTKVYCPCGNLKKEAACNLVRSGEGKPACDSTCEQKRIATQLEKEKEEQRRREIEQEKNRKELAEYEWKLSGKKKKYKEKKVVTDRDDRNVLQKYWIPVTSVLIVIMAGVYFIFYV*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00023391;
- 90% Identity
- iTF_00411076;
- 80% Identity
- -