Hsal008274.1
Basic Information
- Insect
- Hedya salicella
- Gene Symbol
- -
- Assembly
- GCA_905404275.1
- Location
- FR990096.1:123808738-123842834[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 1 1.1e+02 4.9 1.3 5 22 295 312 293 315 0.89 2 22 0.0054 0.61 12.0 0.4 2 21 408 427 407 428 0.93 3 22 0.011 1.3 11.0 0.4 2 21 489 508 488 509 0.92 4 22 6.4 7.2e+02 2.3 0.1 2 12 538 548 537 550 0.81 5 22 0.013 1.4 10.9 0.0 4 21 572 589 572 590 0.93 6 22 0.0015 0.17 13.8 0.1 1 23 628 650 628 650 0.97 7 22 0.066 7.4 8.6 0.2 1 23 659 682 659 682 0.88 8 22 1.6e-05 0.0018 20.0 2.3 1 23 687 709 687 709 0.98 9 22 3.1e-05 0.0035 19.0 0.8 1 23 715 737 715 737 0.96 10 22 0.00077 0.086 14.7 4.2 1 23 743 765 743 765 0.97 11 22 6.6e-07 7.4e-05 24.3 1.1 1 23 771 793 771 793 0.98 12 22 0.0038 0.43 12.5 4.3 1 23 799 821 799 821 0.98 13 22 2.8 3.1e+02 3.5 0.3 1 9 829 837 829 843 0.88 14 22 0.11 13 7.9 0.4 1 12 851 862 851 867 0.86 15 22 0.12 13 7.8 0.3 1 12 951 962 951 966 0.87 16 22 0.31 35 6.5 0.2 2 12 1086 1096 1085 1100 0.86 17 22 8.5 9.6e+02 1.9 7.0 1 13 1185 1197 1185 1211 0.82 18 22 0.12 13 7.8 0.3 1 12 1219 1230 1219 1234 0.87 19 22 8.5 9.6e+02 1.9 7.0 1 13 1319 1331 1319 1345 0.82 20 22 0.075 8.4 8.4 1.9 1 21 1353 1373 1353 1374 0.89 21 22 0.0028 0.32 12.9 0.5 1 23 1381 1403 1381 1403 0.97 22 22 1.3e-05 0.0015 20.3 1.6 1 23 1409 1432 1409 1432 0.96
Sequence Information
- Coding Sequence
- ATGGAAGTGTTTCTGTATAATTCTACGGTTTGTAGATTATGCGGAGAAGAAAATGATAACGGAACATTGTTGTATTCTTGTGAGGAAAATAGCCAGAGCTTAAGTGAAATTATTAATACCTATTTACCAATTAAGGTATCTGATGATGGTCAACTGCCGCGCACGATTTGTCCAGGGTGCACAATCCAGATAGAAGCCACAGTGGAATTTATAACCTTGATCATAAATGGACAGaaAATAATAAGAGAGCTTCATCAAAGAGAGAAGGAGTATAAGAAGTCTTTGACAACCAATGCAGCGGCGAGTGAACCTGAGATTATCACTGAGAAGATTGTCTATGAGATTAACACCAGCGATGGAGTATACCAAGTTGAACACCCCATTACCCTGCAAGTTGCCGGCTTGGAGAAGCCGAAACGCAAGCGCGGCCGGCCTCCCAAGAAGCCCAAGACTCCTGAAGAGTTAGCGCAGGAGGCCGCTGCCAGACAGCAGGTCCAGGAAGCCAAAACCAGCCAGAAAGATGGGGATGAGGTCTCGGGGAAACGAAGGAGGAAAGCCCCAACGAGATTTAAAGAAGCTGTTCAGGGCAAAGAATTAGAGCGCATATTCAAAGAGGAAGGCGTCACGGATGGGGAGGAGAGTGACGGCGAGACGAAGCCGGAGGGGGGCGAAAAGCTAACCGTTTCCAAGGAGCCCGAGGTCATCGGCCACATGGAGGCCTCTGGGGAGCTGGTGGTAGTAGTCAAAGGCAAGGGCCGGGGGAGGCCGAAAGGTCGCATGCGGCCAACCCGCGAGCAGTGCGCCATCTGCGGTATGGAGTTCTCGTGCGTCGGGCGCTACATGTCGCACGTGGCAGCCCACGGCCCCGTGCAGTACCGTTGCGGCTGTGGGCAGACTTACCCCACGCGGCTCACGTTCACCGCGCACCAGCGACACGCGCGCCACGAGGGACAGACCGTCATCCCGTGCGGCACTGAGGCTGCGCCAATAAAGGCGGAGTCTCCACCAGAACAGGAACCGGAGCTGGCTTCAGTGGACAAGATGGTGAGCACGGTACAGGACGCCGAGCTGCCGCCCGCCGTGCCCGACGCCCCGCCTAGCGCGCCCGAGCCACCGCCAGACAATGCGGCAGAAGCAGCACCACCATCATCAGAAGTGCAAACAGAGGTGGAGCCGGAACCGGAGACTGTGGTGCTGGGCCCCTCTGGCAAACCCAAGCTCAAGTGCCCGCAGTGCGAGAAGATGTTCAGCAACAAGCAGAGTCGGTCGTTGCACATCAAGGTTAGCATTTCTTCAGAAGCACTAGCAGAGGTGGAGACTGGTGCTGGGTCCCTCCGGCAAGCCCAGCTCAAGTGCCGCAGTGCGAGAAGATGTTCAACAACAAACAGAGTCGGTCGTTGCACATCAAGAAGCACTAGCAGAGGTGGAGACTGTGGTGCTGGGTCCCTCCGGCAAGCCCAGCTCAAGTGCCCGCAGTGTGAGAAGATGTTCAACACAAAGCAGAGCCGCTTGCTACACATCAAGGTTAGCATTTCTTTAGAAGCACCAACAGAGGCAAGGGGAGGTGGAGCCGGGACTGTGGTGCTCGGTCCCTCCGGCAAGCTGAAGCTTAAATGCCCGCAGTGCGACAAGATTTCAGCAACAAGCAGAGTTGCTCTCTGCACATCAAGAACAATGGTGCTGGGTCCGTCTGGCAAGCCCAAGCCCAAGTCCCCAGGGTGCAACAAGATGTTCAGCAACAATGAGAGTCTGTCGCTGCACATAAAGTTAAGCATTTCTGTAGAAGCACCATCAGAGGCAAGCGGAGGTGGAACCAGGACCGGAGACTGTGGTACTGGTCCATCCGGCAAGCCCAAGGCGGTGCACGAAGGCTCCAAGCCGTACGTGTGCGTGGAGTGCGGCGCTTCGTTCGCGTACCCGCGCTCGTTGGCTCTGCACGTGCACTCGCACCGCAGGACACAGCCCTCGCGCGGGTTCGCCTGTGACCTGTGCGGGAAggTGCTTAACCACCCATCATCGGTGGTGTATCACAAGGAAGCGGAACACGCGGGCCAACGCTACGTGTGTGGGAAATGCGGGAAGCTGTTCAAACACAAGCAGCTTCTGCAGCGGCATCAGTTGGTGCACTCGCAAGCGCGGCCTTACAGCTGCAAGatcTGCAGCACATCGTTTAAGACTAAAGCGAATCTCCTCAACCACGCTCTTCTACATTCCGGTGTGAAGCGGTTCGCGTGTGAGCTCTGCAAACATCGCTTCGCGCACAAGACGAGCCTCACGCTGCACATGCGGTGGCACGCAGGTTTAAAGCCGTTCTCATGCAAAACCTGCGGCAAGAGCTTCAGTCAGAAAGGCAACCTGTCCGAACACGAGCGCATTCACACCGGCGAAAAACCGTACCAGTGCTCACAATGCCCGCGACGGTTCACCACGTCCTCGCAGCACAGACTACACGCGAGGAGACACGCCGCCGACACGGAACGCCCGCACGTGTGCACCCACTGCGGCAAAcgACTACACGCGAGGAGACACGCCGCCGACACGGAACGCCCGCACGTGTGCACCCACTGCGGCAAAcggtacacacacatacacctCGTCCACGCAGCACAGACTACACGCGAGGAGACATGCCGCCGACACGGAACGCCCGCAAGTGTGCACCCACTGCGGCAAAcggtacacacacatacacctCGTCCTCGCAGCACAGACTACACGCGAGGAGACACGCCGCCGACACGGAACGCCAGCACGTGTGCACCCACTGCGGCAAAcggtacacacacatacacctCGTCCTCGCAGCACAGACTACACGCGAGGAGACACGCCGCCGACACGGAACGCCAGCACGTGTGCACCCACTGCGGCAAAcggtacacacacatacacctCGTCCTCGCAGCACAGACTACACGCGAGGAGACATGCCGCCGACACGGAACGCCCGCAAGTGTGCACCCACTGCGGCAAAcggtacacacacatacacctCGTCCTCGCAGCACAGACTACACGCGAGGAAACACGCCGCCGACACGGAGCGCCCGCACGTGTGCACCCACTGCGGCAAAcggtacacacacacatacaccaCGTCCTCGCAGCACAGACTACATGCGAGGAGACACGCCGCCGACACGGAACGCCCGCACGTGTTTACCCACTGCGGCAAAcggtacacacacatacacctCGTCCTCGCAGCATAGACTACACGCGAGGAGACATGCCGCCGACACGGAACGCCCGCAAGTGTGCACCCACTGCGGCAAAcggtacacacacatacacctCGTCCTCGCAGCACAGACTACACGCGAGGAGACACGCCGCCGACACGGAACGCCCGCACGTGTTTACCCACTGCGGCAAAcggtacacacacatacacctCGTCCTCGCAGCATAGACTACACGCGAGGAGACATGCCGCCGACACGGAACGCCCGCAAGTGTGCACCCACTGCGGCAAAcggtacacacacatacacctCGTCCTCGCAGCACAGACTACACGCGAGGAAACACGCCGCCGACACGGAGCGCCTGCACGTGTGCACCCACTGCGGCAAAcggtacacacacacatacaccaCGTCCTCGCAGCACAGACTACATGCGAGGAGACACGCCGCCGACACGGAACGCCCGCACGTGTGCACCCACTGCGGCAAAcggtacacacacatacacctCGTCCTCGCAGCACAGACTACACGCGAGGAGACATGCCGCCGATACGGAATGCCCGCACGTGTGCACCCACTGCGGCAAAcggtacacacacatacacctCGTCCTCGCAGCACAGACTACACGCGAGGAGACATGCCGCCGACACGGAACGCCCGCAAGTGTGCACCCACTGCGGCAAAcggtacacacacatacacctCGTCCTCGCAGCACAGACTACACGCGAGGAAACACGCCGCCGACACGGAACGCCCGCACGTGTGCACCCACTGCGGCAAAcggtacacacacacatacaccaCGTCCTCGCAGCACAGACTACATGCGAGGAGACACGCCGCCGACACGGAACGCCCGCATGTGTGCACCCACTGCGGCAAAcgGTTCGCGTGTCGCGGCTCGTGGCTTGCGCACGTGCGGCGTGAGATGGGCGGGCTGCGGCACCGCTGCGGGGCTTGTGGCCGCGGATTCGCCGAGCGCTGGGCGCTGCTCAAACACACCCGCCGACACACCGGCGAGCGGCCTTTCCGCTGCCCGCTCTGTCCCCGGGCCTTCGCCGACTGCTCCAACCTCAACAAACACAAGaagCAAGTCCACAAGCAAGTCAGCCTGCTCGTGGACAAGAatccgccggcggcgcccgcggtCGAGGACGAGCGCGTCATCTACGTCGCGTATGACGCGGACTCCGGGAGCAACGGCTTCCACATCGTGGACACTGAGCAGATAACGACACTAGATAATGAAAAAGTGTTGACGGACTGCGAGATCTACAGCGGTGACTCGCTGCTCCTTCGGAGGCCGGAGGAGCCCGCCGACCGGAGCCAGCAGCTGGGGCAAGTGGTGGGCGAGCAACTGGAGCCAGTGGCGTTGGAGGAGCAACTAGAACACGAGCAGGAGGAGAAGATTGAGCAGGTGCAACTGGAGGAGTTGACGGAACCGATCGTGTTGGAGGAGAACGATCACATGCAGgTTACGGACGAGCAAGGTAACCCGCTCCACTTCACGATGCAAGATGGCACGCGTCTCGCCATCACCTCTTCTGACGGCAAGTCTTTGCAGGTCATCACTCAAGATGGCCAAACTATCCCAGTGGAAATCAACGGGTTCGCTGATGAAGAGGAAATAGAAAATCCGGACACCATTGTCCACCAGCTGAATCTTCAGAAGACTGTAGACCCCAACGGGGCCTCCCACGTCGCCCACTATTTCACCATCGTCTAG
- Protein Sequence
- MEVFLYNSTVCRLCGEENDNGTLLYSCEENSQSLSEIINTYLPIKVSDDGQLPRTICPGCTIQIEATVEFITLIINGQKIIRELHQREKEYKKSLTTNAAASEPEIITEKIVYEINTSDGVYQVEHPITLQVAGLEKPKRKRGRPPKKPKTPEELAQEAAARQQVQEAKTSQKDGDEVSGKRRRKAPTRFKEAVQGKELERIFKEEGVTDGEESDGETKPEGGEKLTVSKEPEVIGHMEASGELVVVVKGKGRGRPKGRMRPTREQCAICGMEFSCVGRYMSHVAAHGPVQYRCGCGQTYPTRLTFTAHQRHARHEGQTVIPCGTEAAPIKAESPPEQEPELASVDKMVSTVQDAELPPAVPDAPPSAPEPPPDNAAEAAPPSSEVQTEVEPEPETVVLGPSGKPKLKCPQCEKMFSNKQSRSLHIKVSISSEALAEVETGAGSLRQAQLKCRSARRCSTTNRVGRCTSRSTSRGGDCGAGSLRQAQLKCPQCEKMFNTKQSRLLHIKVSISLEAPTEARGGGAGTVVLGPSGKLKLKCPQCDKISATSRVALCTSRTMVLGPSGKPKPKSPGCNKMFSNNESLSLHIKLSISVEAPSEASGGGTRTGDCGTGPSGKPKAVHEGSKPYVCVECGASFAYPRSLALHVHSHRRTQPSRGFACDLCGKVLNHPSSVVYHKEAEHAGQRYVCGKCGKLFKHKQLLQRHQLVHSQARPYSCKICSTSFKTKANLLNHALLHSGVKRFACELCKHRFAHKTSLTLHMRWHAGLKPFSCKTCGKSFSQKGNLSEHERIHTGEKPYQCSQCPRRFTTSSQHRLHARRHAADTERPHVCTHCGKRLHARRHAADTERPHVCTHCGKRYTHIHLVHAAQTTREETCRRHGTPASVHPLRQTVHTHTPRPRSTDYTRGDTPPTRNASTCAPTAANGTHTYTSSSQHRLHARRHAADTERQHVCTHCGKRYTHIHLVLAAQTTREETCRRHGTPASVHPLRQTVHTHTPRPRSTDYTRGNTPPTRSARTCAPTAANGTHTHTPRPRSTDYMRGDTPPTRNARTCLPTAANGTHTYTSSSQHRLHARRHAADTERPQVCTHCGKRYTHIHLVLAAQTTREETRRRHGTPARVYPLRQTVHTHTPRPRSIDYTRGDMPPTRNARKCAPTAANGTHTYTSSSQHRLHARKHAADTERLHVCTHCGKRYTHTYTTSSQHRLHARRHAADTERPHVCTHCGKRYTHIHLVLAAQTTREETCRRYGMPARVHPLRQTVHTHTPRPRSTDYTRGDMPPTRNARKCAPTAANGTHTYTSSSQHRLHARKHAADTERPHVCTHCGKRYTHTYTTSSQHRLHARRHAADTERPHVCTHCGKRFACRGSWLAHVRREMGGLRHRCGACGRGFAERWALLKHTRRHTGERPFRCPLCPRAFADCSNLNKHKKQVHKQVSLLVDKNPPAAPAVEDERVIYVAYDADSGSNGFHIVDTEQITTLDNEKVLTDCEIYSGDSLLLRRPEEPADRSQQLGQVVGEQLEPVALEEQLEHEQEEKIEQVQLEELTEPIVLEENDHMQVTDEQGNPLHFTMQDGTRLAITSSDGKSLQVITQDGQTIPVEINGFADEEEIENPDTIVHQLNLQKTVDPNGASHVAHYFTIV*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -