Hsal042949.1
Basic Information
- Insect
- Hedya salicella
- Gene Symbol
- ZNF711
- Assembly
- GCA_905404275.1
- Location
- FR990120.1:5426788-5442415[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.21 24 7.0 0.5 1 23 191 214 191 214 0.96 2 11 0.00063 0.071 14.9 0.4 1 23 221 243 221 243 0.98 3 11 1.7 1.9e+02 4.1 1.2 1 10 247 256 247 270 0.74 4 11 0.29 33 6.6 2.0 1 23 277 299 277 299 0.85 5 11 1.7e-05 0.0019 19.9 0.3 2 23 304 326 303 326 0.93 6 11 2.7e-05 0.003 19.3 1.7 1 23 332 354 332 355 0.95 7 11 0.0077 0.86 11.5 1.3 3 21 366 384 365 389 0.91 8 11 7.3e-05 0.0082 17.9 1.9 1 23 397 420 397 420 0.94 9 11 0.00021 0.024 16.4 1.7 1 23 425 448 425 448 0.97 10 11 8.2e-07 9.2e-05 24.0 3.3 2 23 456 477 455 477 0.97 11 11 1.1e-05 0.0013 20.4 1.4 1 23 483 506 483 506 0.95
Sequence Information
- Coding Sequence
- ATGTTTCTGGTGATGTATATGCAGGCCCGGAGGTTGTCCGGTCCCGTGCATACTGTGAGCTTACCGCCTATGTTGCGGAGCCCGCAGACAGTGCCCTTCCTGACCCACGGCTCCTGGATCAGTACTACAGCGAGTCTCTATGAGTGTCTCCTTACGGATGTGAGCCGGCCTCCAAGGCTAAATGTGCATGTGCTGGACCCAATCAGCATGCCCCAGGATCCCCTGCCGGAGGAGCCTAAAGATTATCAGCTGGTGTGTATCAAGGATGAGGTGAAGGTGGACTGGGACGATGGCAGAGATGAGGACCTGGACATAACACCTGCAGAGCTTCAAGACCCAGTGGTGGAAGAACAGGAGATTGACATTAAAATTCTGAAAGTGGAGTCTGAGACCCCGAAGAAGAAGAAGGGAAAGGCAAAGCTGAAGAAAGCTGTCAGTTTGAAGGATAAATCTAAGAATCTGAAGAAATCGCAATCAGACGGAAAGATAATTACCATAGAGCTGTCCTACGAGGATATGTTAGCGGAGCGAGAGAAGGACGCCGCCAGAGAGAGCTACCTGAAGGCGCAGTACAAGTGCGCCTCCTGCCTCATACCCTTCAACTACGTCAAGTCGTACGAAGCGCATATGACGAACAAACACTCTTCTtatttGGGCGAATACAGCTGTCCTATATGCAAGACCGTCATCTCTTCAGTGGATTCCTTCACCGCACACTACAAGAGACACATGCGGAGGTACGAATGCAGCATATGCCACAAACGCACTTTGGACATGAAAGTGATGCAACAGCATTACTATTCCACGCACGAGATCTCGCTCAGACAGTACAAATGTAACGTTTGCGGCAAAATCTCTAAttccaTAGACTCGCATCGGTACCACAAAGACACGCATAAGGCACGCGTGCAGTGCCCAGAATGTGACAAGAACTTCAGCCATCGCGCCGGCCTCATGAACCATAGACTtgcagTACACGAACTCCAAAATGCGTTCCCTTGCACCGTTTGTGAAAAAGTGTTCAGATGGAAGGCGAGTCTGAAAAGACATATGGAAAAACACCACGcaaagGACAAAATGGCGTCAGCAGCGTATTGCGCGGCGTGTGGAGTCAGCTTTTCGTCGGCATGCTCATACCAACGGCACATGAAGAACAGTTTGAAGCACGTCACTCAAGAACAACTCAGGTTCATATGCGACCACTGCAACCGCCGGTTCGCGGACAAAACGAAGCTTCGCGACCACATCGAGGAGAAACACCTGCTTATTACTTACGAGTGTCACATCTGTCACAAGCCGTCGAAGAACCGCGTAGGGCTCGACCAGCACATTCGCAACGTGCACCGTGGGCGGCCCAACAACAAGATGTGCCACCACTGCGGGAAAGGATTCCCGACTAAGGTCCAGTTGGAGTCCCACATCAGGACCCACACAGGCGAGCGACCTTTCATATGCGAGTTCTGTCCCACCACCTTCTCACAGCAGTCCAATTTGTACAAACACAACCGACAGGTCCATTTAAACATCAAGTCGAAACGCTACCCGCTCTGCAAGAAACGCAAAGAGGAGCCGGAAGAGACGCAAAAACCCATGATGGAGGACTTCCGGCCCGTTGCGGTGCTGAATTTCGAGCCCGAGCGAGGGTTTCTATGA
- Protein Sequence
- MFLVMYMQARRLSGPVHTVSLPPMLRSPQTVPFLTHGSWISTTASLYECLLTDVSRPPRLNVHVLDPISMPQDPLPEEPKDYQLVCIKDEVKVDWDDGRDEDLDITPAELQDPVVEEQEIDIKILKVESETPKKKKGKAKLKKAVSLKDKSKNLKKSQSDGKIITIELSYEDMLAEREKDAARESYLKAQYKCASCLIPFNYVKSYEAHMTNKHSSYLGEYSCPICKTVISSVDSFTAHYKRHMRRYECSICHKRTLDMKVMQQHYYSTHEISLRQYKCNVCGKISNSIDSHRYHKDTHKARVQCPECDKNFSHRAGLMNHRLAVHELQNAFPCTVCEKVFRWKASLKRHMEKHHAKDKMASAAYCAACGVSFSSACSYQRHMKNSLKHVTQEQLRFICDHCNRRFADKTKLRDHIEEKHLLITYECHICHKPSKNRVGLDQHIRNVHRGRPNNKMCHHCGKGFPTKVQLESHIRTHTGERPFICEFCPTTFSQQSNLYKHNRQVHLNIKSKRYPLCKKRKEEPEETQKPMMEDFRPVAVLNFEPERGFL*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00409581;
- 90% Identity
- -
- 80% Identity
- -