Basic Information

Insect: Hedya salicella
Gene Symbol: -
Assembly: GCA_905404275.1
Location: FR990120.1:9559512-9597600[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 0.0017 0.19 13.6 3.3 1 23 433 455 433 455 0.99

2 22 0.075 8.4 8.4 0.7 1 23 473 496 473 496 0.94

3 22 0.022 2.4 10.1 0.5 2 23 503 524 502 524 0.93

4 22 0.022 2.4 10.1 0.5 2 23 554 575 553 575 0.93

5 22 0.022 2.4 10.1 0.5 2 23 605 626 604 626 0.93

6 22 0.022 2.4 10.1 0.5 2 23 656 677 655 677 0.93

7 22 0.022 2.4 10.1 0.5 2 23 707 728 706 728 0.93

8 22 0.022 2.4 10.1 0.5 2 23 758 779 757 779 0.93

9 22 0.022 2.4 10.1 0.5 2 23 809 830 808 830 0.93

10 22 0.022 2.4 10.1 0.5 2 23 860 881 859 881 0.93

11 22 0.022 2.4 10.1 0.5 2 23 911 932 910 932 0.93

12 22 0.022 2.4 10.1 0.5 2 23 962 983 961 983 0.93

13 22 0.022 2.4 10.1 0.5 2 23 1013 1034 1012 1034 0.93

14 22 0.022 2.4 10.1 0.5 2 23 1064 1085 1063 1085 0.93

15 22 0.022 2.4 10.1 0.5 2 23 1115 1136 1114 1136 0.93

16 22 0.022 2.4 10.1 0.5 2 23 1166 1187 1165 1187 0.93

17 22 0.89 1e+02 5.0 0.8 2 23 1217 1238 1216 1238 0.85

18 22 1.2 1.4e+02 4.6 0.2 2 16 1268 1282 1267 1284 0.83

19 22 4.9 5.5e+02 2.7 1.3 2 12 1319 1329 1318 1331 0.87

20 22 0.00083 0.093 14.6 0.1 2 21 1357 1376 1356 1377 0.93

21 22 0.003 0.33 12.8 7.0 1 23 1388 1410 1388 1410 0.93

22 22 7.8e-05 0.0087 17.8 0.1 1 23 1415 1437 1415 1437 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	0.0017	0.19	13.6	3.3	1	23	433	455	433	455	0.99
2	22	0.075	8.4	8.4	0.7	1	23	473	496	473	496	0.94
3	22	0.022	2.4	10.1	0.5	2	23	503	524	502	524	0.93
4	22	0.022	2.4	10.1	0.5	2	23	554	575	553	575	0.93
5	22	0.022	2.4	10.1	0.5	2	23	605	626	604	626	0.93
6	22	0.022	2.4	10.1	0.5	2	23	656	677	655	677	0.93
7	22	0.022	2.4	10.1	0.5	2	23	707	728	706	728	0.93
8	22	0.022	2.4	10.1	0.5	2	23	758	779	757	779	0.93
9	22	0.022	2.4	10.1	0.5	2	23	809	830	808	830	0.93
10	22	0.022	2.4	10.1	0.5	2	23	860	881	859	881	0.93
11	22	0.022	2.4	10.1	0.5	2	23	911	932	910	932	0.93
12	22	0.022	2.4	10.1	0.5	2	23	962	983	961	983	0.93
13	22	0.022	2.4	10.1	0.5	2	23	1013	1034	1012	1034	0.93
14	22	0.022	2.4	10.1	0.5	2	23	1064	1085	1063	1085	0.93
15	22	0.022	2.4	10.1	0.5	2	23	1115	1136	1114	1136	0.93
16	22	0.022	2.4	10.1	0.5	2	23	1166	1187	1165	1187	0.93
17	22	0.89	1e+02	5.0	0.8	2	23	1217	1238	1216	1238	0.85
18	22	1.2	1.4e+02	4.6	0.2	2	16	1268	1282	1267	1284	0.83
19	22	4.9	5.5e+02	2.7	1.3	2	12	1319	1329	1318	1331	0.87
20	22	0.00083	0.093	14.6	0.1	2	21	1357	1376	1356	1377	0.93
21	22	0.003	0.33	12.8	7.0	1	23	1388	1410	1388	1410	0.93
22	22	7.8e-05	0.0087	17.8	0.1	1	23	1415	1437	1415	1437	0.98

Sequence Information

Coding Sequence: ATGGCACTGTGCGAGAGTCAACTGGATGTGATCCCATTGAAGCGAGAGTCGTCCCCCGGCTCCGAGGGCAGCAAGGAGAGCCCCGAGAAGAAGTCCAAGATGGAACCCAACGgagacatttttgTGCCCGGAGGCCTGCCCCTCACTGTGGACTACCGGTCCCCGGTCTCCCACTTCGTGCCTCCAGAGTTGTACGCGGCCAAACCGAAGCAGGACACGCCTGTCGTCACACCAACCGTGTCGGAGACGACGCCGGTGAAGCGCAAGCGCGGTCGGCCGCGAGTCGACAAGACTAGTCCAGAATATTTGGCCAACTTGGCCGCTAGAAAACAGGCCAAGGAGATGGCGGCCGTGATGAATAATCGCAACGAGAGTGGCGAGAAGAGGAAGCGGGGGCGGCCCAGGGTGGACAAGACCAGCCCTGAATACTTGGCCAGGAAGCGAGCTAGAGAACTGGagGCATTGGAGAGAAAGGCTAAAAGAGAATACAAACGTCGTGGAACTGGtgAATCTGCAGCGTCCTCGTCGGCTGGCGACACCACGCCCCGTGTTAAACGCAAATACACGAAGCGGACGCCTGGCGTGAGCAAGGATGcgACGCCGACGCAGGAGCGAGTGAAGGGCAAGCGCGGGCGCCCGCGCAAGACTGACGTCAATCACAAGCCTCAACAACCCAaaaTCCGCGTGCGGAGTAATCTAATGCCGGAGAATTCAGAACCTATAACGCTGGACAGCGACGATGAACCGGACCTCGgTTCTCCGAGTCAGGCGTCCGACTCGCTAAGTCTAGACGAGAACCTTCGAGCACTGAGACATATTCACGAGAAATACGCGAATATAGACAAGGACGACCTTTATGAAGCGCATCTGCTGGCGGCGAACTTCAAGAAGCCGGACGAGAAGAGAGATGATGACGAGGTGCTGTCAGTAAGAAGCTCTGAAGGTCGCGGCTCGGTAAAAGAGTTGGACAGAGTGGAGAAGCTTGAAGACAGCTCTGGGTCTGACTCAGACAGCAGTAGTTCGGGTTCTGGCAGCTCATCAAGCGGTTCAAGCTCGTCGTCGAGTTCGTCGTCGAGCTCGTCTGACAGTTCCGACAGTGAATCTGAATCGGAGAAGAAAAATACTACTTCTACTAACACACTCCAGCCCGCTGAGGACGACAGATCGTTCGGCGCGTGGTCGTACAGCGGTCCGCCGTCGTCCGGCTCGGAGTCGGACCCGGAGCGCGCcgctgcgcccgcgccggcCAACGACGACGAGATCAGCGAGTCCGACAACGAGTCGCCCGACAAGAGCTTCCAGTGCCACGTCTGCAAGAAGTGGTACTCCACCCGGGTCACGCTCAAGATCCACCGGCGCGTGCACCagaaccgcggcggcggcggcgcgcggcagcGCACGCGCAGCTCCGACCGCTACGAGTGCGACTGCTGCGACCTCGCCTTCAACCGCCGCGAGAAGCTCTGGGACCACAAAGCGTCGGCGCACCGCGGCGCCATGACGGTGCGCTGCGAGGTGTGCCGCAAGTGCTTCGAGGACGACGCCGAgctcgccgcgcacgccgcgcaccACTCCGCCGACGACCGCGCCGGTgagccgtccgtccgtccccaCCCGCTCCATGCCGACCTCAGTTTATATATCATACTAGCGTCGGTGCGCTGCGAGGTGTGCCGCAAGTGCTTCGAGGACGACGCCGAgctcgccgcgcacgccgcgcaccACTCCGCCGACGACCGCGCCGGTgagccgtccgtccgtccccaCCCGCTCCATGCCGACCTCAGTTTATATATCATACTAGCGTCGGTGCGCTGCGAGGTGTGCCGCAAGTGCTTCGAGGACGACGCCGAgctcgccgcgcacgccgcgcaccACTCCGCCGACGACCGCGCCGGTgagccgtccgtccgtccccaCCCGCTCCATGCCGACCTCAGTTTATATATCATACTAGCGTCGGTGCGCTGCGAGGTGTGCCGCAAGTGCTTCGAGGACGACGCCGAgctcgccgcgcacgccgcgcaccACTCCGCCGACGACCGCGCCGGTgagccgtccgtccgtccccaCCCGCTCCATGCCGACCTCAGTTTATATATCAGACTAGCGTCGGTGCGCTGCGAGGTGTGCCGCAAGTGCTTCGAGGACGACGCCGAgctcgccgcgcacgccgcgcaccACTCCGCCGACGACCGCGCCGGTgagccgtccgtccgtccccaCCCGCTCCATGCCGACCTCAGTTTATATATCATACTAGCGTCGGTGCGCTGCGAGGTGTGCCGCAAGTGCTTCGAGGACGACGCCGAgctcgccgcgcacgccgcgcaccACTCCGCCGACGACCGCGCCGGTgagccgtccgtccgtccccaCCCGCTCCATGCCGACCTCAGTTTATATATCATACTAGCGTCGGTGCGCTGCGAGGTGTGCCGCAAGTGCTTCGAGGACGACGCCGAgctcgccgcgcacgccgcgcaccACTCCGCCGACGACCGCGCCGGTgagccgtccgtccgtccccaCCCGCTCCATGCCGACCTCAGTTTATATATCATACTAGCGTCGGTGCGCTGCGAGGTGTGCCGCAAGTGCTTCGAGGACGACGCCGAgctcgccgcgcacgccgcgcaccACTCCGCCGACGACCGCGCCGGTgagccgtccgtccgtccccaCCCGCTCCATGCCGACCTCAGTTTATATATCATACTAGCGTCGGTGCGCTGCGAGGTGTGCCGCAAGTGCTTCGAGGACGACGCCGAgctcgccgcgcacgccgcgcaccACTCCGCCGACGACCGCGCCGGTgagccgtccgtccgtccccaCCCGCTCCATGCCGACCTCAGTTTATATATCATACTAGCGTCGGTGCGCTGCGAGGTGTGCCGCAAGTGCTTCGAGGACGACGCCGAgctcgccgcgcacgccgcgcaccACTCCGCCGACGACCGCGCCGGTgagccgtccgtccgtccccaCCCGCTCCATGCCGACCTCAGTTTATATATCATACTAGCGTCGGTGCGCTGCGAGGTGTGCCGCAAGTGCTTCGAGGACGACGCCGAgctcgccgcgcacgccgcgcaccACTCCGCCGACGACCGCGCCGGTgagccgtccgtccgtccccaCCCGCTCCATGCCGACCTCAGTTTATATATCATACTAGCGTCGGTGCGCTGCGAGGTGTGCCGCAAGTGCTTCGAGGACGACGCCGAgctcgccgcgcacgccgcgcaccACTCCGCCGACGACCGCGCCGGTgagccgtccgtccgtccccaCCCGCTCCATGCCGACCTCAGTTTATATATCATACTAGCGTCGGTGCGCTGCGAGGTGTGCCGCAAGTGCTTCGAGGACGACGCCGAgctcgccgcgcacgccgcgcaccACTCCGCCGACGACCGCGCCGGTgagccgtccgtccgtccccaCCCGCTCCATGCCGACCTCAGTTTATATATCATACTAGCGTCGGTGCGCTGCGAGGTGTGCCGCAAGTGCTTCGAGGACGACGCCGAgctcgccgcgcacgccgcgcaccACTCCGCCGACGACCGCGCCGGTgagccgtccgtccgtccccaCCCGCTCCATGCCGACCTCAGTTTATATATCATACTAGCGTCGGTGCGCTGCGAGGTGTGCCGCAAGTGCTTCGAGGACGACGCCGAgcgcgccgcgcacgccgcgcaccACTCCGCCGACGACCGCGCCGGTgagccgtccgtccgtccccaCCCGCTCCATGCCGACCTCAGTTTATATATCATACTAGCGTCGGTGCGCTGCGAGGTGTGCCGCAAGTGCTTCGAGGACGACGCCGAgctcgccgcgcccgccgcgcaccACTCCGCCGACGACCGCGCCGGTgagccgtccgtccgtccccaCCCGCTCCATGCCGACCTCAGTTTATATATCATACTAGCGTCGGTGCGCTGCGAGGTGTGCCGCAAGTGCTTCGAGGACCTCCACATCCGCTTCCAGAAGTCCGCAGCCGGCCCGAGTGGgctcgaatcccgaccaggggaCCGTTTCATAAGCGCTTGGCGCTGCACGGACTGCGGCGCGTCGTTCCAGCGCTACGAGCAGCTCGCGCGGCACCGCCTGTCCTGCGCACGCGCAGAGAGCGCCACCGGCGCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCACGCACGCGCACTCGCTCACGCGCCACGCGCACAACCACGCGCGCCAGCTCTACAGGTGCGTCGTGTGCAAGGCGTCATTTGCGCGCGCAGACCAATTGGCACAGCATCTCAACAGCCATCTCGCCAACTACAAGCGGCTCAAGCCGTAA
Protein Sequence: MALCESQLDVIPLKRESSPGSEGSKESPEKKSKMEPNGDIFVPGGLPLTVDYRSPVSHFVPPELYAAKPKQDTPVVTPTVSETTPVKRKRGRPRVDKTSPEYLANLAARKQAKEMAAVMNNRNESGEKRKRGRPRVDKTSPEYLARKRARELEALERKAKREYKRRGTGESAASSSAGDTTPRVKRKYTKRTPGVSKDATPTQERVKGKRGRPRKTDVNHKPQQPKIRVRSNLMPENSEPITLDSDDEPDLGSPSQASDSLSLDENLRALRHIHEKYANIDKDDLYEAHLLAANFKKPDEKRDDDEVLSVRSSEGRGSVKELDRVEKLEDSSGSDSDSSSSGSGSSSSGSSSSSSSSSSSSDSSDSESESEKKNTTSTNTLQPAEDDRSFGAWSYSGPPSSGSESDPERAAAPAPANDDEISESDNESPDKSFQCHVCKKWYSTRVTLKIHRRVHQNRGGGGARQRTRSSDRYECDCCDLAFNRREKLWDHKASAHRGAMTVRCEVCRKCFEDDAELAAHAAHHSADDRAGEPSVRPHPLHADLSLYIILASVRCEVCRKCFEDDAELAAHAAHHSADDRAGEPSVRPHPLHADLSLYIILASVRCEVCRKCFEDDAELAAHAAHHSADDRAGEPSVRPHPLHADLSLYIILASVRCEVCRKCFEDDAELAAHAAHHSADDRAGEPSVRPHPLHADLSLYIRLASVRCEVCRKCFEDDAELAAHAAHHSADDRAGEPSVRPHPLHADLSLYIILASVRCEVCRKCFEDDAELAAHAAHHSADDRAGEPSVRPHPLHADLSLYIILASVRCEVCRKCFEDDAELAAHAAHHSADDRAGEPSVRPHPLHADLSLYIILASVRCEVCRKCFEDDAELAAHAAHHSADDRAGEPSVRPHPLHADLSLYIILASVRCEVCRKCFEDDAELAAHAAHHSADDRAGEPSVRPHPLHADLSLYIILASVRCEVCRKCFEDDAELAAHAAHHSADDRAGEPSVRPHPLHADLSLYIILASVRCEVCRKCFEDDAELAAHAAHHSADDRAGEPSVRPHPLHADLSLYIILASVRCEVCRKCFEDDAELAAHAAHHSADDRAGEPSVRPHPLHADLSLYIILASVRCEVCRKCFEDDAELAAHAAHHSADDRAGEPSVRPHPLHADLSLYIILASVRCEVCRKCFEDDAELAAHAAHHSADDRAGEPSVRPHPLHADLSLYIILASVRCEVCRKCFEDDAERAAHAAHHSADDRAGEPSVRPHPLHADLSLYIILASVRCEVCRKCFEDDAELAAPAAHHSADDRAGEPSVRPHPLHADLSLYIILASVRCEVCRKCFEDLHIRFQKSAAGPSGLESRPGDRFISAWRCTDCGASFQRYEQLARHRLSCARAESATGAHACAQCGKRFTHAHSLTRHAHNHARQLYRCVVCKASFARADQLAQHLNSHLANYKRLKP*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -