Hsal011329.1
Basic Information
- Insect
- Hedya salicella
- Gene Symbol
- ZNF711
- Assembly
- GCA_905404275.1
- Location
- FR990097.1:49184298-49206029[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.0051 0.57 12.1 2.9 1 23 343 365 343 365 0.95 2 20 0.00019 0.021 16.6 0.7 1 23 369 392 369 392 0.98 3 20 0.097 11 8.1 0.6 3 22 399 418 397 418 0.95 4 20 0.0029 0.33 12.8 1.0 1 23 425 448 425 448 0.98 5 20 0.3 33 6.5 0.0 3 23 481 502 480 502 0.95 6 20 0.079 8.9 8.3 0.3 2 23 528 550 527 550 0.94 7 20 0.2 23 7.1 0.2 3 23 574 594 572 594 0.95 8 20 6.1e-05 0.0069 18.1 0.5 1 23 598 620 598 621 0.96 9 20 0.21 23 7.0 0.4 3 22 629 648 628 648 0.94 10 20 1.4 1.6e+02 4.4 6.4 1 23 685 708 685 708 0.95 11 20 0.012 1.4 10.9 0.5 2 23 747 769 746 769 0.95 12 20 0.11 12 7.9 2.3 2 23 794 816 793 816 0.96 13 20 0.0016 0.18 13.7 0.5 1 23 838 860 838 860 0.98 14 20 0.063 7.1 8.6 0.0 1 23 864 887 864 887 0.97 15 20 0.04 4.5 9.3 0.1 1 22 894 915 894 915 0.93 16 20 0.045 5 9.1 0.1 2 21 923 942 922 945 0.88 17 20 6.4e-05 0.0072 18.1 2.2 1 23 952 975 952 975 0.97 18 20 0.0023 0.26 13.2 2.3 2 23 980 1001 979 1001 0.97 19 20 1.5e-05 0.0017 20.0 1.4 1 23 1007 1029 1007 1029 0.99 20 20 0.03 3.4 9.6 1.2 3 23 1037 1057 1036 1058 0.95
Sequence Information
- Coding Sequence
- aTGGAGGGCAAAAGTTCGGATTGGGTGCGAGGTCCCAGCGGCCCTACGGTTTGCCGTTGTTGTTTTGCCGAGGGCTGTTATAAGGACATTTCTACCGAATACTTCTGGATGGGGAAGAGAGAAGTTTACGCCGAAATGCTCACGGAAGCGTTTGACCTCACTATCGCGTTTGCCCAGACGACAGGTCCGAACAGCAACAGCCGACTCATCTGTGAGCCCTGCATATCGCGGCTGCGTGACGCTTCGGAGTTCAAACGGCAGGTCCAGGAGTGCGAGAAGATGTTCATGCAATACCTCGACCCGGGAAGGATCACAGTAGAAAGCATAGTGGAGAGTACCCCCGAACCGTTGGAGAAAGAGGTGAAGCTGGAACGTGTGAAGCTAGAAAAGGGTCATAGCGACGATGACTTTGACGACCGGGGCGGCTTCGATGACatggacgacgacgacgacCTCGACGACCAGCCTCTAACAAAGCTTGCCAGCAAAGTGCCTAAAAAGGAGTCTGTCGACCTCCTCGACCTTCTGGACAACGCCAAAGTGGCGGAGAAGAGGAAGTCCACCAGTAAAGCTAAGGCCGGTCCCGCAAAAAAAGCTAAAACGAAGAAGGAGACCCCCAAAGCCACCGCCAGCAAAGCCAAGCCTGAGAAGAAGAAAAAAGacAAGACATACGATCCGGCGCGATGTAACGCTGAAACCATCCTATCGTACTCCACTGCGTACCCGTTTCGCATCACAGACAAGAGCATACTGTGCGTATACTGCCTAGAAGTCCACGACGACCCCAATATCTTCCGCAAACACATGGAAGACGAGCACAGTAACTTCACTCTCAAAGTCGCTTTCCACAACCTGCCGAGCCTAGAGTTTGTAAAAGCAGACATCACCGACCTTAAATGCAGAATATGCTCCCAAAAACACCAAAGCCTAGAAGCTATCGCTGAACATTTACAAACGCAGCATAACCAAAAAATAGACGCGAACGGGAAACTGGGAGTCATGCCCTATGTTCTACATAAAGACGTTCATAATTGCGCCGTATGCGAAAAGAATTTCCCATCGCTGTTCCATCTGAACAGGCACACGGTATCGCACTTCCTAAGCTACGTTTGTCACGTGTGCGGGAAGAGTTACGTGGCTACGACCGGCTTGCTTCGCCACGTGAGATCTAAACATCAGCAATACGAAGTGAACTGCAAGAGGTGTCGGAAAGTGTTCCCTAATATGGAAGCGAAAGAGAAACACAGGCGGACCGAGAAGTCTTGCATGCCGTACGTGTGTCAGAAGTGCAATGAACGATTCTTAGATTGGAAGTCGAGGAAACGACATATGGAGACTGCCCATGTGGACACACAAATCGATCCCGTGAGGAGGAACGCCGCGGCGGTTATTAAGTATACGAGCGCTTACCCGTTTCGCGTGAACGACAAGTCTATACTTTGCGTGTACTGCGGGGACTTGTTCGACGACCCCGCCCAGTTCCGCCTTCACATGGACAGCGAACACGCGAAATTTAACCACCGCATGCCGTTCCAGAACCTTCCCAAATCCGAATACGTTAAAGTCGATATCACTAACCTTAAATGCAGAATTTGCACCGCAACCTTTCCAAAATTAGAACTAATTTTTAAACACATGAGCGAAGAGCACTTTAAAACTGTATACCCTAAATCTCCGCTGGGCGTAATGCCGTTCCTTTTGGACAGCAGCGACTGGATTTGCGTTGTCTGTCAAGAGAATCTACCgtcattattacatttaaatcgTCATACTATCACTCATTTTAGAAGTTACGTGTGCGAGATATGCGGGAAGTCTTACGTAGCGACCACGGGGCTTCTACAGCATATTAGAAAGCATCACGAAAACGCGTACAAGGCGCACTGTAGGCGATGCGGCATGGTTTTCTCCTCGATGGATGCAAAAGCAGTCCACCAAAGAACTGAGAAAAAATGCATGCAGCATTGTTGCTCTCTCTGCCCCGACAGGTTCCCCACTTGGGAACTTAAACAGCatcatttggtcgaacaccacGGCGTGGTAAAAAAGGCGTATCAATGTTCAGATTGTAACGTCACCTGCTCCAGCAGGAGGGTGTTCTATGACCACTACAAATTGTGCCATTCTAGAGCTTACTTAAACGGATGGAGGAGCGTGGAGAAGGCAGCCAGGCGGAACGCAAGAATTATACTGAACTACTCCACGGCATACCCTGTCAAATGCCACATGGCCAACGTCGAGTGTTACATCTGTCATTTATATTTCGACGATCCAGCAATGTTTCGGATCCACATGGACAAGAAGCACACTCTTATAGACAGATCCAAAATTATTGCCCCGTACAAACTAGGCAGTACGCGCGTGGACATCACAAACTTGCGTTGCAAGAGTTGCAGGACAAATTTCGACAACATAGAAACCCTGGTCAAGCATTTGAACGTGTGTCATCAGTTGAACATAGACGAGACCAATCCTTACGGGCTAGTGCCGTTAAAACTGGTAAAAGACCATTACAAGTGTCTCGTTTGCTCGAAAGTGTTTATCAGTATCAAGCAACTGTCGATGCACACCGGCACACACTTTTACAAATACATTTGCGACTTTTGCGGCAACAAATATGAAACACCCGGTGGTATTGACACGCACATTCGTTCTGTTCACCAACAGTCCGCCAGAGGGTACCTTTGTAAACTCTGCAACACCTCTTTCCCGACTGCGGAAGAGAAGGCAGTGCATTTAAAAACCACCAAGGAATGCGCCGGCTCCATGTGCCCAATTTGTAACGAACGCTTTTTTACATGGCAACAGAGAGAAGACCACTTGGTCGATGTGCACGGACATGAAAAGAAAGAGTTTCGCTGTAAAGAATGCGATCAAGTATTCAAGTTTCGTTATTATCTGGTGCGTCACTTCAAAGTCGCTCATaccaatgaaaataaatgtacattttgCGACAAGCAATTCGCTTTTACAACGCAACTGCGCGACCATATAACCAAGCATACAGGGGAAAAACCTTATAAGTGTGATTATTGCGATTTGAGGTTCAGATCCAAGAAAGGGTGGAATCGGCACTTGGCCACACACGACGATGCTAAGAAAGCCGCTTGTCCGGTGTGTAACAAATTGTTCGCCAGGCGTTACAGAATTAAAAGCCACGTCGAAAAACATCACCCAGAGTATACATACGAGTAA
- Protein Sequence
- MEGKSSDWVRGPSGPTVCRCCFAEGCYKDISTEYFWMGKREVYAEMLTEAFDLTIAFAQTTGPNSNSRLICEPCISRLRDASEFKRQVQECEKMFMQYLDPGRITVESIVESTPEPLEKEVKLERVKLEKGHSDDDFDDRGGFDDMDDDDDLDDQPLTKLASKVPKKESVDLLDLLDNAKVAEKRKSTSKAKAGPAKKAKTKKETPKATASKAKPEKKKKDKTYDPARCNAETILSYSTAYPFRITDKSILCVYCLEVHDDPNIFRKHMEDEHSNFTLKVAFHNLPSLEFVKADITDLKCRICSQKHQSLEAIAEHLQTQHNQKIDANGKLGVMPYVLHKDVHNCAVCEKNFPSLFHLNRHTVSHFLSYVCHVCGKSYVATTGLLRHVRSKHQQYEVNCKRCRKVFPNMEAKEKHRRTEKSCMPYVCQKCNERFLDWKSRKRHMETAHVDTQIDPVRRNAAAVIKYTSAYPFRVNDKSILCVYCGDLFDDPAQFRLHMDSEHAKFNHRMPFQNLPKSEYVKVDITNLKCRICTATFPKLELIFKHMSEEHFKTVYPKSPLGVMPFLLDSSDWICVVCQENLPSLLHLNRHTITHFRSYVCEICGKSYVATTGLLQHIRKHHENAYKAHCRRCGMVFSSMDAKAVHQRTEKKCMQHCCSLCPDRFPTWELKQHHLVEHHGVVKKAYQCSDCNVTCSSRRVFYDHYKLCHSRAYLNGWRSVEKAARRNARIILNYSTAYPVKCHMANVECYICHLYFDDPAMFRIHMDKKHTLIDRSKIIAPYKLGSTRVDITNLRCKSCRTNFDNIETLVKHLNVCHQLNIDETNPYGLVPLKLVKDHYKCLVCSKVFISIKQLSMHTGTHFYKYICDFCGNKYETPGGIDTHIRSVHQQSARGYLCKLCNTSFPTAEEKAVHLKTTKECAGSMCPICNERFFTWQQREDHLVDVHGHEKKEFRCKECDQVFKFRYYLVRHFKVAHTNENKCTFCDKQFAFTTQLRDHITKHTGEKPYKCDYCDLRFRSKKGWNRHLATHDDAKKAACPVCNKLFARRYRIKSHVEKHHPEYTYE*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -