Basic Information

Insect: Hedya salicella
Gene Symbol: -
Assembly: GCA_905404275.1
Location: FR990096.1:42683962-42704873[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 0.0045 0.51 12.2 1.5 1 23 198 220 198 220 0.98

2 28 0.00059 0.066 15.0 1.3 2 20 255 273 254 275 0.93

3 28 0.00029 0.032 16.0 0.3 3 23 309 330 307 330 0.96

4 28 4.9e-05 0.0054 18.4 0.6 1 23 381 404 381 404 0.96

5 28 0.37 41 6.2 0.1 1 23 427 449 427 449 0.95

6 28 5.5e-05 0.0062 18.3 2.8 2 23 714 735 713 735 0.97

7 28 0.0014 0.15 13.9 3.8 2 23 785 807 785 807 0.97

8 28 0.036 4 9.4 1.1 1 23 857 880 857 880 0.95

9 28 0.002 0.22 13.4 0.2 1 23 936 958 936 958 0.97

10 28 0.022 2.5 10.1 6.1 2 23 970 991 969 991 0.96

11 28 0.045 5.1 9.1 1.7 2 23 1003 1024 1002 1024 0.96

12 28 0.0049 0.55 12.1 1.0 1 23 1034 1056 1034 1056 0.98

13 28 0.011 1.3 11.0 7.2 1 23 1084 1106 1084 1106 0.97

14 28 0.0027 0.3 13.0 2.3 1 23 1117 1139 1117 1139 0.98

15 28 3.4e-05 0.0038 18.9 0.8 1 23 1147 1169 1147 1169 0.97

16 28 0.00084 0.094 14.5 0.1 2 23 1189 1211 1188 1211 0.97

17 28 0.16 18 7.4 1.8 1 23 1229 1251 1229 1251 0.92

18 28 0.29 32 6.6 3.6 1 23 1258 1280 1258 1280 0.96

19 28 0.03 3.3 9.7 1.6 2 23 1291 1313 1290 1313 0.95

20 28 0.0047 0.52 12.2 0.3 1 23 1335 1357 1335 1357 0.97

21 28 0.029 3.3 9.7 0.1 2 23 1438 1459 1437 1459 0.92

22 28 4.9 5.5e+02 2.7 4.0 5 23 1469 1487 1466 1487 0.94

23 28 0.022 2.5 10.1 0.9 2 23 1498 1520 1497 1520 0.95

24 28 0.25 28 6.8 2.2 2 23 1537 1555 1537 1555 0.89

25 28 0.17 19 7.3 1.8 2 21 1559 1578 1559 1579 0.93

26 28 1.6 1.8e+02 4.2 2.3 2 23 1627 1648 1626 1648 0.93

27 28 0.0025 0.28 13.1 0.6 2 23 1659 1681 1658 1681 0.95

28 28 1.4 1.6e+02 4.4 2.5 2 19 1719 1736 1718 1739 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	0.0045	0.51	12.2	1.5	1	23	198	220	198	220	0.98
2	28	0.00059	0.066	15.0	1.3	2	20	255	273	254	275	0.93
3	28	0.00029	0.032	16.0	0.3	3	23	309	330	307	330	0.96
4	28	4.9e-05	0.0054	18.4	0.6	1	23	381	404	381	404	0.96
5	28	0.37	41	6.2	0.1	1	23	427	449	427	449	0.95
6	28	5.5e-05	0.0062	18.3	2.8	2	23	714	735	713	735	0.97
7	28	0.0014	0.15	13.9	3.8	2	23	785	807	785	807	0.97
8	28	0.036	4	9.4	1.1	1	23	857	880	857	880	0.95
9	28	0.002	0.22	13.4	0.2	1	23	936	958	936	958	0.97
10	28	0.022	2.5	10.1	6.1	2	23	970	991	969	991	0.96
11	28	0.045	5.1	9.1	1.7	2	23	1003	1024	1002	1024	0.96
12	28	0.0049	0.55	12.1	1.0	1	23	1034	1056	1034	1056	0.98
13	28	0.011	1.3	11.0	7.2	1	23	1084	1106	1084	1106	0.97
14	28	0.0027	0.3	13.0	2.3	1	23	1117	1139	1117	1139	0.98
15	28	3.4e-05	0.0038	18.9	0.8	1	23	1147	1169	1147	1169	0.97
16	28	0.00084	0.094	14.5	0.1	2	23	1189	1211	1188	1211	0.97
17	28	0.16	18	7.4	1.8	1	23	1229	1251	1229	1251	0.92
18	28	0.29	32	6.6	3.6	1	23	1258	1280	1258	1280	0.96
19	28	0.03	3.3	9.7	1.6	2	23	1291	1313	1290	1313	0.95
20	28	0.0047	0.52	12.2	0.3	1	23	1335	1357	1335	1357	0.97
21	28	0.029	3.3	9.7	0.1	2	23	1438	1459	1437	1459	0.92
22	28	4.9	5.5e+02	2.7	4.0	5	23	1469	1487	1466	1487	0.94
23	28	0.022	2.5	10.1	0.9	2	23	1498	1520	1497	1520	0.95
24	28	0.25	28	6.8	2.2	2	23	1537	1555	1537	1555	0.89
25	28	0.17	19	7.3	1.8	2	21	1559	1578	1559	1579	0.93
26	28	1.6	1.8e+02	4.2	2.3	2	23	1627	1648	1626	1648	0.93
27	28	0.0025	0.28	13.1	0.6	2	23	1659	1681	1658	1681	0.95
28	28	1.4	1.6e+02	4.4	2.5	2	19	1719	1736	1718	1739	0.90

Sequence Information

Coding Sequence: ATGGCTCTCAAGCTGGGAAAATGTAGACTTTGTCTCAAACTTGGCGACTTCTATTCCATCTTCACTGTGGACAACAGTGTCCAGTTGGCGGACATGGTGATGGAATGCGCTCGAATCAAAATATTTGAAGGAGATGGACTGCCAGATAAAGTCTGTGCTGAATGCATTCAGAAGCTCAGCAGtgcatacatttttaaacaacaaTGTGAAAGAGCAGATCAGGAGTTACGGCGCAACTTTGTGCCACCACCAGGATCCAGCTCAACCCCGGTCCTACCAAATAGGAATAGTGATTCAGTTTCACCAACCCAATCTGAGGCTACCAACCAAACCAAACAATCTCAAGCGTCTGAAGTGGATTGTGTCCAAAGAAACACCCGCAAACGTAGTCATGAAAGCCTGGAAATTGCTTCTGCCAGTAGCAACGAAATTCGACCCACCACTTCAAAACGTGTTGAGGAACTTAAAAGCAGTCAGAAGAAACCTAGACTCAAAACAAGCAATTATTATGCAGATTCTGATTACGAAGACAACAGCGCTTCTCAATTTTCAGGTGAAACAGATTCTGATGAGCCCCTTTTACGAGATGAATTCAAGTGTAAAGTCTGCGGAAAGCAGTTCCACTCGATAAAAAGTGTAGCTGCCCACTCCAGAATACATTCTGGCAAGGTAAACAAGGCAAAGGATACTCTCAATGAAAACGTAGTTGTAAATATCCCAAAGAACAATATACAGGATGCAACAGACATAGAAGATCAACTTAGATGTGAGAAATGTGGCAAGACTTTCAAGTTGAAGATAATGCTAAAACGTCACCACGAGAGCTGCGGTAAATCACCGCAGAAATCTCAAGCGAAACCGATCCAAAAAGAGCTACTCATATCGTTGGAACCCATTGACGGTATTCATGCTAAAAGAATCAACTGTACCATGTGCGCAACAACATTTAAAACTGTGGAGAACTTGGAAAAACATTTGCGGGTTGTTCATGCAGCCGTGCTTCCGAAAGTAAAATCTGAGCCAAAATCAAATAACGGAAAAGTTTCCGTGCCTTGTATTTACTGTAGAAAACCGTTCGACGATTATTATGTTCACAGCGAACACTTTAGCAAGTGTCCCGAAAGCACTAATACTTCCTCGTACGAATGTCCCGTTTGCAAAAAGGTGACAACTCGTAAGGCTTCGTATTTCCGGCACATCAAGGATGTGCATTTCGAGCCGCGCATGTGGGCCATGAAGCCGGAGGCGCCGGAGGAGTCTAGTTCGCAGCAGGAGCTGTTCGAGTGCCGCATGTGCTACAAGCAGCTGGCCACCGAACAGCTGCTCATCACGCACCTTGCGGCGCACGTGTCCAACATCGAGGACGCCGAGGAGGCGGCCGGGGACGAGTCCAGGAAGACCCAGGTTGACGTCGTCTATCTGGATTTCCAAAAAGCCTTCGACCGTGTTGAGTACGATATTCTTCTTCTGAAACTAGGTGCTATGGGATTTACATCCAGGCTTCTAAATCTGTTTGCTAGCTACCTCTCAGATCGGAAGCAGTACGTTAAGTATGGCCCCTATGTGTCCGAATGCTACAACACACGGTCCGGTCTCAGCCAGGGATCCAACCTCGGGCCATTTCTTTTCGTACTGCTTATTAATGACCTACCTGACGAAGTGCAAAGTTCCATTCTGCTGCTGTTTGCTGATGATGTGAAGTTGGTCAAACCTATTAAAACGCAGGAGGATTACGACGAGTTGCAACGGGACATAGATGCGATTTACAGTTGGAGTCGtgtgaataaaatttatttcaatgcgGATAAGTGCGAAATGATGATATTTACACGGTCCAACTTGCCTCGCGAATATGAATACACGATTGGTGGCGTCCCTATAACGCGTTCAGTGCAGGTGCGCGATCTGGGAGTGCACTTTGATCCGGGGCTCACGTTTCACCACCATGTTCAGGCCGTGACCGACGCCGCGTACAGAAGGCTAGGTTTCGTTCTGCGTAATTCGTCGCCTCTGACCGTGCACGCCACGCGCGTACTGTATGCGGCGCTCGTGCGCAGTATTCTCGAAACGAATACATGGCCAAGCACTATTGAAGATTCCTCATCAATATTGTCCGACAATAGTGTCGCGGGCCCTCTGAAATGTAACTACTGCGATAAAAGATTCAAATACAAGAAATCTTTAGCAACCCATGAGATGAAACATTTCCAACTTGAAAAATCCGAGAGTAATCAAAACCCAGAAGATTTGTTAAATGATGGAACAGATGCCGAAGCGGGTGCATCAACTAGTTTGTTGAACGAGTCGTACCGCGACGAGTCTGAGTCGAGCCCGGACGAGGGCGATGACAACACGTGCGATATCTGCGAGAAGCAGTTCTCCTACAAGCGATTGCTAGTGCACCACAAGCGCACCAAGCACAACATGAGCTCCGGCACCAAGCGCGCCAAAGTCATCCTCAAGGACTGCCTCGTGCGGTGCCTCATATGCGACGTCGAGATGAACGTGAGCGCCATCAACGACCATAACAAGAAACACATTCAGCTCAATATGAAACCTCGCAATCTCTACACTTGCATCGATTGCAGTGAGAAATTCAAGAGTTGTAACGCTCTAGCCACTCACATCAAGCTAGTACACAGGTTAAAGCAGCTGCCGCCTAAGCAATTTGAGGGTGCCGACTTAGCGGATTTTTGTGAGGTCGTTGTGACAAAAGCGGAACCGCTGGACGAGATCCAGAGTCACAACGGCTTTGGTGAGGTTCCGGAGGAGCAGGAGGGGTCGCCTCTAGTCAACCTGAGTGGATTTAATTGTACTATTTGCGGAAAGAACATGCCAACTCTGATTTCATTGAAAAGACACATCAATTGGCATTCGAATGTGGGAAataacttagaaaaaaaattggagtGCTTTGTTTGCAAagagaCATTCCGATTTCAATGTCACTATAAATTGCACATGCGTGAACACTACCGTGACACCAATCTTGACCCCAAGCTGCTCACCTGCACTATTTGCAACCGCAGAAGCAAACACTTGCGAGCTGCCCAGGCTCATATGAACTATCACAAGCAAACTCGTTTCAAGAATAAGGACTACCAATGCTCCATATGTAAGCGCGTTTTCCAATACCGGAAGGTGTATCTCTCTCACATGGCTATACACTACAAACGTGGGGAAAGTCAGAACACAATCGTAGGCGATATAATGCCTACGACTGCTGACAAAACGGTTTTTGATGGGTCTCATACTTGTCTTCATTGCGGAAAAGTATGCGACTCTGAAAATTCACTAAAACATCACATGTCTTGGCACAAATCGAAGACTTTGTTGTTTGGTGCGCGACACGAATGCCCAATTTGCAATATCATGTTCACAAATAAGAAAAGGCAAGAGTTACATACGAGAACTCATTATGAAGACGAAAACGGTCCATTCAAGTGTACAATATGTGGCAAAGGCTATACAGATGAAGAATATTTCCGAAAGCACGTTAAAGGGCACAACTTCGACCATCAGTCTCACAAGGACAGAATAGCGAAACTTCGAAAGGACAAAGTGAAGTGTCCCATCTGCGTGCGCTACTACCCTGACTGGGTAAAGCTGATCCGGCACCTGCGGCGCACCCACCCTGAGAGCAAGATGGTGAAGCAGGACCCCgacgcgcccgcgccgcgcgtgTTCGCCTGCAAGCTGTGCGCCAAGTCGTTCTGCGACGAGCGCCGCCTGCGCTACCACGAGGAGGCCCACCTGCGCAAGCCCGAGTTCTTCAAGTGCAAGTTCTGTGGTAAGAAAACCATATCGCTCAAAAATCATAATCTGCACATCAAAGCACACCTCACTTCCAAACATATCGATAACCCTCTTAAATGTCCGCAATGTGAGGAGCAATTCATCAAAGGATATGATTTGCATCACCACTTGCGGGATGTGCATAACATTAATGAAACGTGGATTGCGGATCGCAAAGAGCAAACGCTTAATGGTCCCTTAAAAGAGTTTCAATGCTCGATTTGTCTCAAAATACTTGCGAGCAAAGGGAACTACGAGAGACATTTGGATTACCATAATTCCCTAAGATGCAACTACTGCTACGACTATTTCAGTTCATTGAGGTTTCTAGAAGGACATCTGACATATAGTTGTGACAAAAAGAAATTGGTCGGTGATACCGAAATATATCcgaggaaaataaaatgccATGTTTGTTACAAACCATTCCATTTACAAGTAAAACTGGATTGTCATCTGCGTACACAACATGATATAAAAGTATCTAAGGAAGCTGCGAAAAGCAAAAAAGATCTTGTATGTGATTATTGCTTTAGAGTATTCGAAAACCTGGATGCTTTAACGGGGCATAAAGTGTATCATCGCACAGTTGGATATTACGGATGTATATACTGCAAAAGGAAGTTCAGCACTTTGACAGTGTACAGGAAACATAAGAACCATCACTTATCCCAGCTAAATGTCGATAATCCGACTAAGTGCGAACATTGCGATGAGACTTTTGTCGCCTTCCGAGAAATGATATACCACATGAGAGACGACCACGGAGACAACAAGGAGTGGCTCGTGATGCCCAAGGAGTCGATCGAGGAGACTTGCCCTATTTGTAACAAGGTGTTCTTCAACTTGCATAGGCATTTGGACTATCATGAAGAAAACAGATGTAAGAAGTGTGGAGAATACTTTTATTCCCGGACGGAGTTCGATAATCACCTCTGCGCCATCGAGAGCGATGAGGAAGTGAGCAGTGTGCGCGAAGATTTGCGTCCCAAGTACGAAGAGTGCCGGTTCTGCTTCAAGCCTATCACGAGAAAGAGTTCTAAGGCGAAGCATGATCACATACATAAGGGTTCTGGATCTATTTCTTGCCGATTCTGTACgcataaatttaaaacaatcgaCGCATTCAACATCCATGCATTTTCGCATCGCAATCGTAAATACAGAAAAAATCCATTGAAATGTCGTAAATGCGGACAAAAATTTATTCAGTATGGGCCTTTTATAAAGCACATGAAGGAGGCGCACAAGTTCttccaaaaaatgcactatcgAGCAACCGTGAAGGCCGAGCCTTGCGTCGTATGTGGTGACGAGTTCCCCAACTTGCACAATCACTACCGAGCGCATCTACAGAACCAGTGTCCCTCGTGCCACAAATACTTCACGTCTGCCAAAGTGTTCTCGCAGCACGAATGCGGCAAGGAGGACTCTGACCCTACCAAGGTGTTTACATGTGACGAGAACTTACCTCTACTGATTAACACGTATATTCCCAAAGACGAAGTGGACGAGCAAAAGTACTATGCTTATGGCAGTGAAGAGGAAGAAGATAGCGGCCCGGCTCTTCAGGGCCACATTGTAAAAGATGAGGAAAGCCAAAATTCGAATGAGAACGAGCACTTCCAATTGCAGTGTCCCATCATATCGGATGTGCTGTCGCTGTACCAGAAGCCAGAGGTCGGGGTGGACGAGCGCGCCGACGACCCTGACATCATCAACTTGTCGGACGACGACGACGTGGGCGTCGTTGAAAACGATTCCATGTGTCCCACGATTACAATTGATGATTGA
Protein Sequence: MALKLGKCRLCLKLGDFYSIFTVDNSVQLADMVMECARIKIFEGDGLPDKVCAECIQKLSSAYIFKQQCERADQELRRNFVPPPGSSSTPVLPNRNSDSVSPTQSEATNQTKQSQASEVDCVQRNTRKRSHESLEIASASSNEIRPTTSKRVEELKSSQKKPRLKTSNYYADSDYEDNSASQFSGETDSDEPLLRDEFKCKVCGKQFHSIKSVAAHSRIHSGKVNKAKDTLNENVVVNIPKNNIQDATDIEDQLRCEKCGKTFKLKIMLKRHHESCGKSPQKSQAKPIQKELLISLEPIDGIHAKRINCTMCATTFKTVENLEKHLRVVHAAVLPKVKSEPKSNNGKVSVPCIYCRKPFDDYYVHSEHFSKCPESTNTSSYECPVCKKVTTRKASYFRHIKDVHFEPRMWAMKPEAPEESSSQQELFECRMCYKQLATEQLLITHLAAHVSNIEDAEEAAGDESRKTQVDVVYLDFQKAFDRVEYDILLLKLGAMGFTSRLLNLFASYLSDRKQYVKYGPYVSECYNTRSGLSQGSNLGPFLFVLLINDLPDEVQSSILLLFADDVKLVKPIKTQEDYDELQRDIDAIYSWSRVNKIYFNADKCEMMIFTRSNLPREYEYTIGGVPITRSVQVRDLGVHFDPGLTFHHHVQAVTDAAYRRLGFVLRNSSPLTVHATRVLYAALVRSILETNTWPSTIEDSSSILSDNSVAGPLKCNYCDKRFKYKKSLATHEMKHFQLEKSESNQNPEDLLNDGTDAEAGASTSLLNESYRDESESSPDEGDDNTCDICEKQFSYKRLLVHHKRTKHNMSSGTKRAKVILKDCLVRCLICDVEMNVSAINDHNKKHIQLNMKPRNLYTCIDCSEKFKSCNALATHIKLVHRLKQLPPKQFEGADLADFCEVVVTKAEPLDEIQSHNGFGEVPEEQEGSPLVNLSGFNCTICGKNMPTLISLKRHINWHSNVGNNLEKKLECFVCKETFRFQCHYKLHMREHYRDTNLDPKLLTCTICNRRSKHLRAAQAHMNYHKQTRFKNKDYQCSICKRVFQYRKVYLSHMAIHYKRGESQNTIVGDIMPTTADKTVFDGSHTCLHCGKVCDSENSLKHHMSWHKSKTLLFGARHECPICNIMFTNKKRQELHTRTHYEDENGPFKCTICGKGYTDEEYFRKHVKGHNFDHQSHKDRIAKLRKDKVKCPICVRYYPDWVKLIRHLRRTHPESKMVKQDPDAPAPRVFACKLCAKSFCDERRLRYHEEAHLRKPEFFKCKFCGKKTISLKNHNLHIKAHLTSKHIDNPLKCPQCEEQFIKGYDLHHHLRDVHNINETWIADRKEQTLNGPLKEFQCSICLKILASKGNYERHLDYHNSLRCNYCYDYFSSLRFLEGHLTYSCDKKKLVGDTEIYPRKIKCHVCYKPFHLQVKLDCHLRTQHDIKVSKEAAKSKKDLVCDYCFRVFENLDALTGHKVYHRTVGYYGCIYCKRKFSTLTVYRKHKNHHLSQLNVDNPTKCEHCDETFVAFREMIYHMRDDHGDNKEWLVMPKESIEETCPICNKVFFNLHRHLDYHEENRCKKCGEYFYSRTEFDNHLCAIESDEEVSSVREDLRPKYEECRFCFKPITRKSSKAKHDHIHKGSGSISCRFCTHKFKTIDAFNIHAFSHRNRKYRKNPLKCRKCGQKFIQYGPFIKHMKEAHKFFQKMHYRATVKAEPCVVCGDEFPNLHNHYRAHLQNQCPSCHKYFTSAKVFSQHECGKEDSDPTKVFTCDENLPLLINTYIPKDEVDEQKYYAYGSEEEEDSGPALQGHIVKDEESQNSNENEHFQLQCPIISDVLSLYQKPEVGVDERADDPDIINLSDDDDVGVVENDSMCPTITIDD*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -