Basic Information

Gene Symbol
-
Assembly
GCA_905404275.1
Location
FR990115.1:8785172-8787658[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 3.3 6.5e+03 -1.3 0.0 22 33 234 245 231 255 0.84
2 5 4.3e-09 8.5e-06 27.1 0.3 2 45 266 311 265 312 0.94
3 5 1.3e-09 2.7e-06 28.8 0.2 2 44 319 365 318 367 0.93
4 5 2.4e-09 4.7e-06 28.0 0.0 1 43 371 413 371 415 0.97
5 5 7.7e-08 0.00015 23.1 0.0 3 45 423 467 421 468 0.96

Sequence Information

Coding Sequence
ATGGAGAATATGGCTGTAGACAGTGACGAAGAAAAGCACCTaatagatatacataatatgaatGCTGctttagaagaagaagaagagccTCCCTTATTTCAAGGGCCTTCCTTGAGCGGTAGCAATATTTCACGACTCTCTCGGTCCATACCCATCACTTCGACCGACGAGACGGCACAGGAGCACCTAAGAATCGATTCAGCTTTAGGCCTTAACAAACTACTAGACGAGAAGTTACGAAGACTTGAAAAAGTACTCGTCGACCGCTTGCAGGAGTGTAGACAAAAGTTAAGTGACCTCGCAGAGTTAGCAGTACCAGGAGAGAAACAAGACCGTCAAGAAACATTCCGGTATATAAGTTGCGGTAAGCCATATTTTAAGGACAAATCTAATTTTCCAGCCCCAGATAATGAAGACACTATACTTATGGCTAAAAGTAACATGTATGATTTCTCTGAAATTACCTCAGTTCCTGGTTGGACTGTAAAAGATAAATGCAACTTAACAAACCTTCTCCTGAAAATGTCAatagatattaaaaagaaagagCTGACTTCCAAAATTGCACAGTTAAAACGAGAAAGTAAGAAAACAAAGCCAAAGACGTTAGAAAAACAAATTGATGCCATCAACAGAGAGATTACTGGTTTAGCAAAAAAGACACTAAAGGATGTTGCCTTACCGATAGACCAAGAGTATGACTGGGAGATTGTGGCTAACAAATTAAACCGAAGGCACAGTGCAGCAGAGTACAGATCGCTTTGGAAAGTATTCCTACATCCAAGCATAAATAAAAGTGTTTGGAATAAAAATGAGCATGCCCGTTTGCAAGAAATAGCTCATCGGCACCGCCTTCAAGACTGGGATTCCATTGCTAAAGAACTGGACACTGGCAGGACGGGCTACCAATGCTTCGTATATTATAGGACAAATATGAGCAGTTCATTCACTGGAAAAAAATGGACTAAAGAGGAAGAAGAATATCTCCGAAGACTGATTGAATATTACAAAGAAGATGACTACATACCATGGGGCAAAGTAGCTGCATCTATGGAGAACAGAACCAAGATACAAATttacaacaaatattttagAATGGTGGAAAAAAGAAAAGGCAGATTTCTACCAGAAGAAGATGCCGTAATTTTAACATGTTCTGATAAGTTTGGAATGAACTTCAAAAAAATGTCCGAGTATCTTCCCGGTCGTTCAGCTACGCAGATTCGGGTGCGATACCAAGTTTTAGCCAAAAAGAGGATCTCGACTGTCTGGACATTACAAGAGGATAAGCAGTTACTTCAACTAATGACCAATGAACCATCTCTTACCAACTATTCTAGTGTTACAAAGTACTTCCCAGGGAAAACCCGTACACACCTTAGAGCAAGATATCTAACATTGACTAAATGGATGAAGAGACACCCAAACTCTACACTTGATAATGCCCCTAGAAGAGGAGCGCGACGTCTTGGCCATGGCCTTGCAACAGATAATCTTAATAAAGcaacagaaaaacttaaaaagagAATAGAATctgagattaaaaataaaaggagCAAAAGGATCACAAAAGAATCACCTCTTGAAGTTATTGAAGATGCTATTGTAGCCAACCTTTTAACCGAAAGTGTTAAAGATGAAGAAGAACGAAAAGACGAGTTCTATGAAGAAGAAGACATAATGATTCTGGACACGGAGTCAGTGGTGTCATTACACAATCTGAATGTGACAAATATCCAGAAAATGATTGTTTTCTTGAGAGGAGAGTTAAACCAAAAACTTTTCAAAAACAGCACATATGCTCAACAGTATCCTGGTTTACTGAATCCTAAGCTAGAGGTGAATCTATTCAAAGTCAAGAGTTACTCGAGAAAGGAGAGGACTAGGTCAATCGAAGTAAAGGGAGCACCAGATATATGGGGAAATAACACTTTAGGCAACTTGACTTATGTGCTCCCCCCACATTATGCAACATTAACAGGACTGAGAAAAATAATATCACATGTCAATgctaaatacaaaaaagaagGCAACATATACACCCGAGCGAGTATCACcaatatattaaaaagaaattctGCTTTTAAAAAGCAGTACTTTCTTTTAATGGAGCGATTCAACTCATTGTTTGTGTTTCCACTAATGCTGTCAAATGACGGTCCTGAAATAATAGGAAAACGCGTTAATGAAGAGCGGAAAATGGAAGGCCAAGGGACGAACACTTGCATGCCAACTCAAGACATCTTTGCGAAGTTTTCCACTCCCATTGTTCCAGCACAGTCAACACCTGCTAAAACCAAAGCGAAAGCAAAAGAGGAGGCTGGATCAACCAGTGAAGATATGGGCATAGACTTGGTTGAGTCCAATGAGGATAAGAAGGACAAAATCTGTGTCCAGAAAGTTGTTGTTGATGAGAACAGGTTCAGATTTATTGCTGAAAATGAAGGAAGGCTCAAGAAAAAGAATAAGTcatatgtatgtttttaa
Protein Sequence
MENMAVDSDEEKHLIDIHNMNAALEEEEEPPLFQGPSLSGSNISRLSRSIPITSTDETAQEHLRIDSALGLNKLLDEKLRRLEKVLVDRLQECRQKLSDLAELAVPGEKQDRQETFRYISCGKPYFKDKSNFPAPDNEDTILMAKSNMYDFSEITSVPGWTVKDKCNLTNLLLKMSIDIKKKELTSKIAQLKRESKKTKPKTLEKQIDAINREITGLAKKTLKDVALPIDQEYDWEIVANKLNRRHSAAEYRSLWKVFLHPSINKSVWNKNEHARLQEIAHRHRLQDWDSIAKELDTGRTGYQCFVYYRTNMSSSFTGKKWTKEEEEYLRRLIEYYKEDDYIPWGKVAASMENRTKIQIYNKYFRMVEKRKGRFLPEEDAVILTCSDKFGMNFKKMSEYLPGRSATQIRVRYQVLAKKRISTVWTLQEDKQLLQLMTNEPSLTNYSSVTKYFPGKTRTHLRARYLTLTKWMKRHPNSTLDNAPRRGARRLGHGLATDNLNKATEKLKKRIESEIKNKRSKRITKESPLEVIEDAIVANLLTESVKDEEERKDEFYEEEDIMILDTESVVSLHNLNVTNIQKMIVFLRGELNQKLFKNSTYAQQYPGLLNPKLEVNLFKVKSYSRKERTRSIEVKGAPDIWGNNTLGNLTYVLPPHYATLTGLRKIISHVNAKYKKEGNIYTRASITNILKRNSAFKKQYFLLMERFNSLFVFPLMLSNDGPEIIGKRVNEERKMEGQGTNTCMPTQDIFAKFSTPIVPAQSTPAKTKAKAKEEAGSTSEDMGIDLVESNEDKKDKICVQKVVVDENRFRFIAENEGRLKKKNKSYVCF*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-