Hdys034326.1
Basic Information
- Insect
- Hecatera dysodea
- Gene Symbol
- -
- Assembly
- GCA_905332915.1
- Location
- HG995317.1:10051116-10082974[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.00012 0.012 17.0 4.4 1 23 281 303 281 303 0.98 2 11 0.37 40 6.0 0.9 1 23 310 332 310 332 0.96 3 11 2.4 2.5e+02 3.5 0.1 1 23 1337 1360 1337 1360 0.97 4 11 0.37 40 6.0 7.3 1 23 1367 1389 1367 1390 0.96 5 11 4.9e-06 0.00052 21.4 0.5 2 23 1396 1417 1396 1417 0.98 6 11 4.7e-05 0.0051 18.3 4.7 1 23 1423 1445 1423 1445 0.99 7 11 0.001 0.11 14.0 1.8 1 22 1451 1472 1451 1476 0.93 8 11 0.74 80 5.0 0.2 1 23 1484 1507 1484 1507 0.96 9 11 0.0091 0.97 11.1 0.2 1 23 1513 1536 1513 1536 0.90 10 11 1e-05 0.0011 20.3 1.0 1 23 1545 1567 1545 1567 0.98 11 11 4.9e-05 0.0053 18.2 0.7 1 23 1573 1596 1573 1596 0.96
Sequence Information
- Coding Sequence
- ATGGAAACGATGAGTTTAGGCAATGAAGATGATATTAAGCTGGATTTTGAGCCGGCAAAAACTATTTGTAGGTGCTGTTTGACAACGGACCGACGAATGTTCAACGCTGTTATGTTCGAAGCGTTTTTTAAGGAACTTGCCGGTATTAACGTAACGGAGTCAGATGGCCTGCCGCAGTGGTTGTGCTATGAATGTGGCAGTCTGCTGCAGAAGTCCGTCAGGTTCAAACACAAGGTGCTGCGCGCGCACACCATGCTGTACGAATACCTCACTCGCTGTGCCCCTTTTCCTATAGAACCCCAAGACGAGGAGCTGTCCAAGTATGCGAGTCCACACCTGAGCACCACCAGTGTTCTGACTATTGACATCGTCGGCAAGGGTAAGGCGGGCTACCACGAGGTTttggagCACGAGAAACAAGTCCAGTCTTCAGGCTTAGATGAGATAGATATTCAGTGCATCAGCAAAATTGAAGGCGACGCAGTAAAAGAAGAAAATGGCTTTTCCGATTATGAAGACAATATCACTTTGGAGGAATTCAGATCTGTAGCAAcgaaaataacagaagacgatATAGCTTCTCTACTACAAGAAACTGATCAAGTAGAAGTTAAAGAGGAAATAACCAAGAAGAGAAAAACTAAAACGAAAGATGTCAAaactaaaaagaagaaaaaagaaatTGAGGCAGCTCTGGAAGGCGAGAGTCAAGTGGAAACCAAGTCTTCTATAAGGAAGCCGGTGGAACTGGACCCAGCGAAGATCAGGATAGTCACCTTGAACCCTGAGGAGCAGATCAAGCAGAGAGagGAAGAAAGCAAGGCTGGGTTAAAATTCCCGTTCCAGTGCAACTTGTGCCATAAAGGTTTTAACTTTGAGTCGAAATTGCAGAATCATATGAGCAAGCACAGCCCGTCGCGCGGGCCGTATGAGTGCAAGCTGTGCCGCATGCACCTGCCCACCGCATACAGCTACAACGTGCACTCGCTCATACACAACCGCCGCTACGAGTGCGTCGCGTGCGGGCGCCGCATGATCGACCGGCCCTCCATCATAGACCATTACAGTAGCTACACACCGCCGCTACGAGTGCGTCGCGTGCGGGCGCCGCATGATCGACCGGCCCTCCATCATAGACCATTACAGGTGACGCAACATGTGCCTTCTGTCTGTCTGCTTACAGTACATATTCGTGTGCCCCACACTAGTAGCTACACACCGCCGCTACGAGTGCGTCGCGTGCGGGCGCCGCATGATCGACCGGCCCTCCATCATAGACCATTACAGGTGACGCAACATGTGCCTTCTGTCTGTCTGCTTACAGTACATATTCGTGTGCCCCACACTAGTAGCTACACACCGCCGCTACGAGTGCGTCGCGTGCGGGCGCCGCATGATCGACCGGCCCTCCATCATAGACCATTACAGGTGACGCAACATGTGCCTTCTGTCTGTCTGCTTACAGTACATATTCGTGTGCCCCACACTAGTAGCTACACACCGCCGCTACGAGTGCGTCGCGTGCGGGCGCCGCATGATCGACCGGCCCTCCATCATAGACCATTACAGGTGACGCAACATGTGCCTTCTGTCTGTCTGCTTACAGTACATATTCGTGTGCCCCACACTAGTAGCTACACACCGCCGCTACGAGTGCGTCGCGTGCGGGCGCCGCATGATCGACCGGCCCTCCATCATAGACCATTACAGGTGACGCAACATGTGCCTTCTGTCTGTCTGCTTACAGTACATATTCGTGTGCCCCACACTAGTAGCTACACACCGCCGCTACGAGTGCGTCGCGTGCGGGCGCCGCATGATCGACCGGCCCTCCATCATAGACCATTACAGGTGACGCAACATGTGCCTTCTGTCTGTCTGCTTACAGTACATATTCGTGTGCCCCACACTAGTAGCTACACACCGCCGCTACGAGTGCGTCGCGTGCGGGCGCCGCATGATCGACCGGCCCTCCATCATAGACCATTACAGGTGACGCAACATGTGCCTTCTGTCTGTCTGCTTACAGTACATATTCGTGTGCCCCACACTAGTAGCTACACACCGCCGCTACGAGTGCGTCGCGTGCGGGCGCCGCATGATCGACCGGCCCTCCATCATAGACCATTACAGGTGACGCAACATGTGCCTTCTGTCTGTCTGCTTACAGTACATATTCGTGTGCCCCACACTAGTAGCTACACACCGCCGCTACGAGTGCGTCGCGTGCGGGCGCCGCATGATCGACCGGCCCTCCATCATAGACCATTACAGGTGACGCAACATGTGCCTTCTGTCTGTCTGCTTACAGTACATATTCGTGTGCCCCACACTAGTAGCTACACACCGCCGCTACGAGTGCGTCGCGTGCGGGCGCCGCATGATCGACCGGCCCTCCATCATAGACCATTACAGGTGACGCAACATGTGCCTTCTGTCTGTCTGCTTACAGTACATATTCGTGTGCCCCACACTAGTAGCTACACACCGCCGCTACGAGTGCGTCGCGTGCGGGCGCCGCATGATCGACCGGCCCTCCATCATAGACCATTACAGGTGACGCAACATGTGCCTTCTGTCTGTCTGCTTACAGTACATATTCGTGTGCCCCACACTAGTAGCTACACACCGCCGCTACGAGTGCGTCGCGTGCGGGCGCCGCATGATCGACCGGCCCTCCATCATAGACCATTACAGGTGACGCAACATGTGCCTTCTGTCTGTCTGCTTACAGTACATATTCGTGTGCCCCACACTAGTAGCTACACACCGCCGCTACGAGTGCGTCGCGTGCGGGCGCCGCATGATCGACCGGCCCTCCATCATAGACCATTACAGGTGACGCAACATGTGCCTTCTGTCTGTCTGCTTACAGTACATATTCGTGTGCCCCACACTAGTAGCTACACACCGCCGCTACGAGTGCGTCGCGTGCGGGCGCCGCATGATCGACCGGCCCTCCATCATAGACCATTACAGGTGACGCAACATGTGCCTTCTGTCTGTCTGCTTACAGTACATATTCGTGTGCCCCACACTAGTAGCTACACACCGCCGCTACGAGTGCGTCGCGTGCGGGCGCCGCATGATCGACCGGCCCTCCATCATAGACCATTACAGGTGACGCAACATGTGCCTTCTGTCTGTCTGCTTACAGTACATATTCGTGTGCCCCACACTAGTAGCTACACACCGCCGCTACGAGTGCGTCGCGTGCGGGCGCCGCATGATCGACCGGCCCTCCATCATAGACCATTACAGGTGACGCAACATGTGCCTTCTGTCTGTCTGCTTACAGTACATATTCGTGTGCCCCACACTAGTAGCTACACACCGCCGCTACGAGTGCGTCGCGTGCGGGCGCCGCATGATCGACCGGCCCTCCATCATAGACCATTACAGGTGACGCAACATGTGCCTTCTGTCTGTCTGCTTACAGTACATATTCGTGTGCCCCACACTAGTAGCTACACACCGCCGCTACGAGTGCGTCGCGTGCGGGCGCCGCATGATCGACCGGCCCTCCATCATAGACCATTACAGGTGACGCAACATGTGCCTTCTGTCTGTCTGCTTACAGTACATATTCGTGTGCCCCACACTAGTAGCTACACACCGCCGCTACGAGTGCGTCGCGTGCGGGCGCCGCATGATCGACCGGCCCTCCATCATAGACCATTACAGGTGACGCAACATGTGCCTTCTGTCTGTCTGCTTACAGTACATATTCGTGTGCCCCACACTAGTAGCTACACACCGCCGCTACGAGTGCGTCGCGTGCGGGCGCCGCATGATCGACCGGCCCTCCATCATAGACCATTACAGGTGACGCAACATGTGCCTTCTGTCTGTCTGCTTACAGTACATATTCGTGTGCCCCACACTAGTAGCTACACACCGCCGCTACGAGTGCGTCGCGTGCGGGCGCCGCATGATCGACCGGCCCTCCATCATAGACCATTACAGTACATATTCGTGTGCCCCACACTAGTAGCTACACACCGCCGCTACGAGTGCGTCGCGTGCGGGCGCCGCATGATCGACCGGCCCTCCATCATAGACCATTACAGAACACAGCACGAAGGCTTTGTTACGTTATTCACGTGCCATCTTTGTGGGAAAGTTTCGAATAACAACAAAACTCACCGCGGTCACATGAGAAATCACCACAGCGGGGACCGGCCGAAGTGCGACCAGTGCGGGAAAACGTTCATAAACAAGGACTCTCTAGTGGAGCATCAGCAAATACACCAGGGTATCAAAAACTACGAGTGCTCGATATGTAACAAACGCTTCAGGACGAGGACTCAAATAAAACATCATCAGCTGACCCACACCGACGTCAAAGATTACTACTGCGTCGAGTGCGATGTCAGGTTCAAATCAGCGCACAGTCTGAGGCAACATCTACAGAAGAGTTTGAAGCATCGTGACAAACAAAGTTTGAAGTTCTCGTGCACGCGCTGCCCGGCGCGCTTCGCGTGCGCGCGCGGGCTGGCGGCGCACGCGCGCGTGCAGCACGAGGGCGTGCGCGCGCACGTGTGCGGCGagtgcggcgccgcgctggcGTCGCGCTCGTCGCTGCGCAAGCACGCGCACGCCGTGCACCGCGGCGTGCGGCCCGCGCGCCGACACGTCTGCGACACCTGCGGGAAGGCGTTCCGGgGTAAGAGCGTCCTGACAAATCATGTGCGGACCCACACGGGGGAGAAGCCTTTTGAATGCAGTGAGTGCGGTCGAAGATTCACTCAACGCACAGCTATGAGGACGCATGTCAAACTGGTGCATCTGAAGCTGAGGCGCACGGCAAAGATCAAGCCAGAGCTGCCTCCGGGGGCGCAGTCTCCGAAGCTGGACGTGTTCAAACCCGAGCCGCTGGCGGAGCCCTGGCGAGCGCCTTGTGACGTCTACTTCCAAGTCAGCGCCGTCTGA
- Protein Sequence
- METMSLGNEDDIKLDFEPAKTICRCCLTTDRRMFNAVMFEAFFKELAGINVTESDGLPQWLCYECGSLLQKSVRFKHKVLRAHTMLYEYLTRCAPFPIEPQDEELSKYASPHLSTTSVLTIDIVGKGKAGYHEVLEHEKQVQSSGLDEIDIQCISKIEGDAVKEENGFSDYEDNITLEEFRSVATKITEDDIASLLQETDQVEVKEEITKKRKTKTKDVKTKKKKKEIEAALEGESQVETKSSIRKPVELDPAKIRIVTLNPEEQIKQREEESKAGLKFPFQCNLCHKGFNFESKLQNHMSKHSPSRGPYECKLCRMHLPTAYSYNVHSLIHNRRYECVACGRRMIDRPSIIDHYSSYTPPLRVRRVRAPHDRPALHHRPLQVTQHVPSVCLLTVHIRVPHTSSYTPPLRVRRVRAPHDRPALHHRPLQVTQHVPSVCLLTVHIRVPHTSSYTPPLRVRRVRAPHDRPALHHRPLQVTQHVPSVCLLTVHIRVPHTSSYTPPLRVRRVRAPHDRPALHHRPLQVTQHVPSVCLLTVHIRVPHTSSYTPPLRVRRVRAPHDRPALHHRPLQVTQHVPSVCLLTVHIRVPHTSSYTPPLRVRRVRAPHDRPALHHRPLQVTQHVPSVCLLTVHIRVPHTSSYTPPLRVRRVRAPHDRPALHHRPLQVTQHVPSVCLLTVHIRVPHTSSYTPPLRVRRVRAPHDRPALHHRPLQVTQHVPSVCLLTVHIRVPHTSSYTPPLRVRRVRAPHDRPALHHRPLQVTQHVPSVCLLTVHIRVPHTSSYTPPLRVRRVRAPHDRPALHHRPLQVTQHVPSVCLLTVHIRVPHTSSYTPPLRVRRVRAPHDRPALHHRPLQVTQHVPSVCLLTVHIRVPHTSSYTPPLRVRRVRAPHDRPALHHRPLQVTQHVPSVCLLTVHIRVPHTSSYTPPLRVRRVRAPHDRPALHHRPLQVTQHVPSVCLLTVHIRVPHTSSYTPPLRVRRVRAPHDRPALHHRPLQVTQHVPSVCLLTVHIRVPHTSSYTPPLRVRRVRAPHDRPALHHRPLQVTQHVPSVCLLTVHIRVPHTSSYTPPLRVRRVRAPHDRPALHHRPLQVTQHVPSVCLLTVHIRVPHTSSYTPPLRVRRVRAPHDRPALHHRPLQVTQHVPSVCLLTVHIRVPHTSSYTPPLRVRRVRAPHDRPALHHRPLQVTQHVPSVCLLTVHIRVPHTSSYTPPLRVRRVRAPHDRPALHHRPLQVTQHVPSVCLLTVHIRVPHTSSYTPPLRVRRVRAPHDRPALHHRPLQVTQHVPSVCLLTVHIRVPHTSSYTPPLRVRRVRAPHDRPALHHRPLQYIFVCPTLVATHRRYECVACGRRMIDRPSIIDHYRTQHEGFVTLFTCHLCGKVSNNNKTHRGHMRNHHSGDRPKCDQCGKTFINKDSLVEHQQIHQGIKNYECSICNKRFRTRTQIKHHQLTHTDVKDYYCVECDVRFKSAHSLRQHLQKSLKHRDKQSLKFSCTRCPARFACARGLAAHARVQHEGVRAHVCGECGAALASRSSLRKHAHAVHRGVRPARRHVCDTCGKAFRGKSVLTNHVRTHTGEKPFECSECGRRFTQRTAMRTHVKLVHLKLRRTAKIKPELPPGAQSPKLDVFKPEPLAEPWRAPCDVYFQVSAV*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -