Basic Information

Insect: Hecatera dysodea
Gene Symbol: -
Assembly: GCA_905332915.1
Location: HG995316.1:10942442-10945721[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00075 0.08 14.5 0.1 2 23 223 244 222 244 0.97

2 11 0.00096 0.1 14.1 0.3 1 20 251 270 251 273 0.95

3 11 1 1.1e+02 4.6 2.4 1 22 278 299 278 300 0.85

4 11 0.00033 0.035 15.6 2.0 1 23 306 327 306 327 0.99

5 11 0.063 6.8 8.4 1.0 2 23 333 354 332 354 0.95

6 11 0.0023 0.25 12.9 2.2 1 23 358 380 358 380 0.96

7 11 0.027 2.9 9.6 2.8 2 23 387 408 386 408 0.97

8 11 0.0058 0.62 11.7 1.9 1 23 414 436 414 436 0.94

9 11 0.00018 0.019 16.4 2.5 1 23 442 464 442 464 0.99

10 11 0.0014 0.15 13.6 0.4 1 23 470 493 470 493 0.94

11 11 0.031 3.3 9.4 2.4 2 19 500 517 499 523 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00075	0.08	14.5	0.1	2	23	223	244	222	244	0.97
2	11	0.00096	0.1	14.1	0.3	1	20	251	270	251	273	0.95
3	11	1	1.1e+02	4.6	2.4	1	22	278	299	278	300	0.85
4	11	0.00033	0.035	15.6	2.0	1	23	306	327	306	327	0.99
5	11	0.063	6.8	8.4	1.0	2	23	333	354	332	354	0.95
6	11	0.0023	0.25	12.9	2.2	1	23	358	380	358	380	0.96
7	11	0.027	2.9	9.6	2.8	2	23	387	408	386	408	0.97
8	11	0.0058	0.62	11.7	1.9	1	23	414	436	414	436	0.94
9	11	0.00018	0.019	16.4	2.5	1	23	442	464	442	464	0.99
10	11	0.0014	0.15	13.6	0.4	1	23	470	493	470	493	0.94
11	11	0.031	3.3	9.4	2.4	2	19	500	517	499	523	0.92

Sequence Information

Coding Sequence: ATGGCAAGCAGAATAATATTTGAAGATGATATTGTTGACCAGGGAATCAATGAAATAGAACAACTGAAATTAAATGAAGAATCTATGGTAAATGACAAACACCTAGCAGATGGGGATATTTACAGTTCAAATGAAAGCCAGGATTCCGTTATCGACAATACCACAGAAATTATTAGAAAACAACATAACTTTATATCAGATAATGTCATCATACTTGGCACTAACGTAAATAAAGGAAATCAAATTTCTAAGGAGCAAGATGGTAACATTTCTCCAGCTGACGGTAACAGTTCTCAATATGAGGGTAACGGTTCTCAAGATGAGGGTAACAGTTCTCAAGATGAGGGTAACACTTCACATCATGATGGTAACACTTCTCAAGACAAGGGAAACATTTGTCAAGATGAGGATATTGAGGGTAATGTTACCAAAATTAGGGAGGGTAAGCCTAAGGGTAAAAGAAGATTCAAAAGAGAGTTAGAGATGCTTTTGTCAGACACAAGAGTGGGTGAAGAAGATTTAAACAGCAAATATGATGTGTTTggagatgaaaataaaatatttaaaaagtataaGTTGAGGAAAATTGAGCAAACAGTTTCATATAAGGAACCAGCAGATGTCATATTGAAACGTTCCTACGGTGCAGATAATGAGATGGACTTGACTTGTCCTGTTTGTAAGAAAGTGCTTGATAGCAAGTTGGGGTTACTAAACCACCTCCGGATCCATAACAGAGGTGCACTAAAGTATACGTGCTCGCTATGCTCCATGAAATTCGACAGAAAAGCGGATTTGATAGCCCATAGACCGCAACACGAGGGAGAGTCATTCCTCTGTCAGGAATGCAAGCTAGCCTTTTCTAGTTACTGCGACTACCTACTCCACAACTACGAACACTTAAACCGACCACATTTCAAATGCTCAGAATGCGGACTGCGCTATCGAAAATCAGTGTACAAAAAGCACATTATGACACATTTCGACAACAAAATATCCTGCGACTTATGCCCTTTCGTTGCTAAAGGCCCACATCATCTGCAGACCCATTTGACTCagcataataataaatttacttGCATCGAGTGTGGGAAGGTGTGTAATAGAAAGTCTGTTTTTGAGTACCATATGAGTATGCATACTGGCGTCAAAAAGATACAGTGCCTTTACTGCGGCGCATGTTTTCGCGGCAAAAATGCCAGAGACGTTCACCATAGGACACACACAGGTGAAAAACCTTTTACGTGTGAAATTTGCGGGCACAAAATGCGACAATGGACAGATTACAAACGTCACAAAGACGCACATGTCGCTGAGAAAAAGTACACATGCGATTTGTGCGGGAAAAAGTATCTGCATAAGAATTATCTTGTCGTGCATATGAGGTCTCATACAAAGAAGAATTTGTATGAATGCCCTGAGTGTGATTCTAAGTTTGCCACCGTGAATGGGTTGAAGACTCATACGATGTTCAAGCATACAAGTGAGAGGCCTGTAGAGTGCGCGCTTTGTGATaagaaatttattaattataatcaatACAGGAAACATTGTCGGGCGAAGTATCATTTGAGGAATGTGTATGGAAATAACATGAGTGTCAATCCGAAAGAATGA
Protein Sequence: MASRIIFEDDIVDQGINEIEQLKLNEESMVNDKHLADGDIYSSNESQDSVIDNTTEIIRKQHNFISDNVIILGTNVNKGNQISKEQDGNISPADGNSSQYEGNGSQDEGNSSQDEGNTSHHDGNTSQDKGNICQDEDIEGNVTKIREGKPKGKRRFKRELEMLLSDTRVGEEDLNSKYDVFGDENKIFKKYKLRKIEQTVSYKEPADVILKRSYGADNEMDLTCPVCKKVLDSKLGLLNHLRIHNRGALKYTCSLCSMKFDRKADLIAHRPQHEGESFLCQECKLAFSSYCDYLLHNYEHLNRPHFKCSECGLRYRKSVYKKHIMTHFDNKISCDLCPFVAKGPHHLQTHLTQHNNKFTCIECGKVCNRKSVFEYHMSMHTGVKKIQCLYCGACFRGKNARDVHHRTHTGEKPFTCEICGHKMRQWTDYKRHKDAHVAEKKYTCDLCGKKYLHKNYLVVHMRSHTKKNLYECPECDSKFATVNGLKTHTMFKHTSERPVECALCDKKFINYNQYRKHCRAKYHLRNVYGNNMSVNPKE*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -