Basic Information

Insect: Hecatera dysodea
Gene Symbol: -
Assembly: GCA_905332915.1
Location: HG995315.1:2591035-2603044[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.58 63 5.4 2.9 1 23 414 436 414 436 0.95

2 9 6.3e-07 6.8e-05 24.1 1.2 1 23 483 506 483 506 0.97

3 9 6e-05 0.0064 17.9 0.3 2 23 512 533 512 533 0.97

4 9 8.8e-05 0.0094 17.4 4.1 1 23 541 563 541 563 0.97

5 9 3e-06 0.00032 22.0 2.0 1 23 568 590 568 590 0.98

6 9 3e-06 0.00032 22.0 1.4 1 23 599 621 599 621 0.99

7 9 2.3e-05 0.0025 19.2 3.6 1 23 627 650 627 650 0.96

8 9 1.4 1.5e+02 4.2 2.5 1 12 656 667 656 679 0.89

9 9 3.3 3.5e+02 3.0 5.0 1 23 687 710 687 710 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.58	63	5.4	2.9	1	23	414	436	414	436	0.95
2	9	6.3e-07	6.8e-05	24.1	1.2	1	23	483	506	483	506	0.97
3	9	6e-05	0.0064	17.9	0.3	2	23	512	533	512	533	0.97
4	9	8.8e-05	0.0094	17.4	4.1	1	23	541	563	541	563	0.97
5	9	3e-06	0.00032	22.0	2.0	1	23	568	590	568	590	0.98
6	9	3e-06	0.00032	22.0	1.4	1	23	599	621	599	621	0.99
7	9	2.3e-05	0.0025	19.2	3.6	1	23	627	650	627	650	0.96
8	9	1.4	1.5e+02	4.2	2.5	1	12	656	667	656	679	0.89
9	9	3.3	3.5e+02	3.0	5.0	1	23	687	710	687	710	0.94

Sequence Information

Coding Sequence: ATGTTGCACAACACAGGGCCTTACGGTCCGAACGAGGCACCCGTGAACATGGGAGCGCCCGTAAATATGACACCAATAAGTGGTCATATGAATATCGctcataatattaataatttgagTAAAATAGGTCATCAAGATGTCTCACCGCCTAGCGGACACTATAACCTACCGGACTATGCCCATTACAACCACCCTTCTATAGGAATATCGCCGCAAATTAATCAATTCCCCAACTATCAACAACTGGGCTTCCAACACCCTTATATGAGCCACAATGTAAATAACATGAACGATTTACAATTCCCAAACGGTATGTTTCCTATGAATTTAAATATACAGAACGAGCATAACGCTAATATGATGAATTATGCTCATGATAAAAGAATAATCGAGTCTGTGAGGCAAGAAAACTTTAAAGAACAAAACATGTTGAAAATGCCTTTAAATATACCTCAGATACCAAATAAAAGCTATAACACACAAATTGGTGGCAATAATGACTATGTACATAATGATATTTATGAAGAAACTAATCATAATTTAGAATTAAACATGAAAACTCCaggaaaattacaaataaacagcaCAAGGCGGAAAAACATTGAAAACACAGTTAAactaattgaaaatattattattcactCATCTAACAAATCAAGAGAAGTACCACCAATGATTCCAATTgcatcaaaaacaaataaagctgATATACCATCAGAAATGATTGTGGAAATAACAGAACCAATATCAAATATTCCAGACTCAAATACAGATCCATTAGCACCGTCTCCTGCAGATTTAACAGCAGAAGAAcctgaaaataataatgatacacCAAACCCAATGGGAAATGACAGTAATGGTAAAAGAAAACCAGTAAATGACAGTAATGGTAAAAGAAAACCAGTAAATGACAGTAATGACAAAAGAAAACCAGTAAATGACAGTAATGACAAAAGAAAACCAGGGAGTGAAGAATCATCTGACGAAGAAATAAAACCTACAGGAATAACGCATCATTATATAAGGGAGCAGGACACTGAAGTGACGGACAATAGTATCGTCATAAAGGTTGAGAAAGCAAGCTGGGCTGACTCTGAATGCTATACGCCGTTCTTGAAAGATTGTAATGGGTTTCACAGGGACGAACATATTATGAATTATAGGATTATTGAGGGCGACTGTAGTGTTGCTGAAGCTATTTCTGCTTACACAAATGAAATAAAACCAGAAGGGGTATTTGAATGTCCGCATTGTGCCCTACTCTTTAAacacccaaaaagatttttgatACACAATAAGTGGCACACATTTGGGCTAACAAATATAAAACGGATGGAGATTGCAAAAATAAGAGAACAAAAGAGGTTTGAGAGGAAAGAAGCAAAGATTATTGAGAGGATGAACTCTAAAGAGGTCACCGATGTTAAGGTGGATGGGAAGGTGTACCCATGTAAGGATTGTGATAAGGTGTTCAGTGCTAAAAGTAGCTTGAAAAATCATAGACAAAGGTCACACCCAACCGGCGTCCGAGAATGTAAAATCTGCCACAAAGCGATAACAAGCTGGATGGCGCTTCGTGCTCATATGGCGACTCACACAGCGGACTCGGGGCACGGCTTTCAATGCAGCCAGTGTCCCAAGAGGTTCAAGTACTCACACTCGCTGGCAAAGCATTCTGATACTCACTTGGAAAAAGTCCACTCTTGCACGGACTGCCCCAAGAAGTTCGGCTCTCAAGCTCTACTTAAGATGCACATGAAAACACACGAGCGAGTATTGCGCGGAGCGACATACAGGTGTACTTACTGCGGGAAGGGGTTCTTTGAGTCTTATAGTTTACAGGTACACGAAAGAACGCATCGCAACGAGAGACCTTTTGCGTGTGATATCTGTCACACCTGCTTCGGAACAAATTCTAGTCTCAAACGACACGTCAAAGTGTCTCACAGCACAGAGAAGCCTTATCAGTGTACAACATGCCGGCGAAACTTTTCTACGGAGCCTATCAGAGACCGACACGAGCTGAGGGTGCACGGGAACCCTGAGGACTTCAAGTTTCCTTGCAAACAGTGTTCCTGCAAATATTTAAAAcgaaaagatctacaaaaacacGTCTATAAAATGCATCCCAAAGGCAAAAGGAAGAAAAAGGTGAAAGTAAGCGAATCGGAATAA
Protein Sequence: MLHNTGPYGPNEAPVNMGAPVNMTPISGHMNIAHNINNLSKIGHQDVSPPSGHYNLPDYAHYNHPSIGISPQINQFPNYQQLGFQHPYMSHNVNNMNDLQFPNGMFPMNLNIQNEHNANMMNYAHDKRIIESVRQENFKEQNMLKMPLNIPQIPNKSYNTQIGGNNDYVHNDIYEETNHNLELNMKTPGKLQINSTRRKNIENTVKLIENIIIHSSNKSREVPPMIPIASKTNKADIPSEMIVEITEPISNIPDSNTDPLAPSPADLTAEEPENNNDTPNPMGNDSNGKRKPVNDSNGKRKPVNDSNDKRKPVNDSNDKRKPGSEESSDEEIKPTGITHHYIREQDTEVTDNSIVIKVEKASWADSECYTPFLKDCNGFHRDEHIMNYRIIEGDCSVAEAISAYTNEIKPEGVFECPHCALLFKHPKRFLIHNKWHTFGLTNIKRMEIAKIREQKRFERKEAKIIERMNSKEVTDVKVDGKVYPCKDCDKVFSAKSSLKNHRQRSHPTGVRECKICHKAITSWMALRAHMATHTADSGHGFQCSQCPKRFKYSHSLAKHSDTHLEKVHSCTDCPKKFGSQALLKMHMKTHERVLRGATYRCTYCGKGFFESYSLQVHERTHRNERPFACDICHTCFGTNSSLKRHVKVSHSTEKPYQCTTCRRNFSTEPIRDRHELRVHGNPEDFKFPCKQCSCKYLKRKDLQKHVYKMHPKGKRKKKVKVSESE*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00071769;
90% Identity: -
80% Identity: -