Basic Information

Insect: Hecatera dysodea
Gene Symbol: -
Assembly: GCA_905332915.1
Location: HG995298.1:18978665-18987628[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.21 23 6.7 0.5 2 23 34 55 33 55 0.90

2 15 0.74 79 5.1 2.9 1 19 64 82 64 87 0.94

3 15 0.027 2.8 9.6 3.8 1 23 93 116 93 116 0.95

4 15 0.0017 0.18 13.4 2.0 1 23 118 140 118 140 0.97

5 15 6.4 6.8e+02 2.1 0.1 1 9 147 155 147 159 0.89

6 15 0.12 13 7.5 0.5 3 23 226 247 225 247 0.95

7 15 0.06 6.5 8.5 1.1 1 16 254 268 254 272 0.80

8 15 6.3e-06 0.00067 21.0 0.3 1 23 282 305 282 305 0.91

9 15 0.00011 0.012 17.0 0.2 1 23 314 337 314 337 0.95

10 15 0.0041 0.44 12.1 0.2 2 23 343 366 342 366 0.95

11 15 0.99 1.1e+02 4.7 0.5 3 23 373 393 373 393 0.96

12 15 0.012 1.3 10.7 0.2 1 23 398 420 398 420 0.92

13 15 0.00016 0.017 16.6 2.0 1 23 426 448 426 448 0.97

14 15 0.00054 0.058 14.9 1.1 1 23 454 476 454 476 0.98

15 15 1.1e-05 0.0012 20.2 3.1 1 23 482 505 482 505 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.21	23	6.7	0.5	2	23	34	55	33	55	0.90
2	15	0.74	79	5.1	2.9	1	19	64	82	64	87	0.94
3	15	0.027	2.8	9.6	3.8	1	23	93	116	93	116	0.95
4	15	0.0017	0.18	13.4	2.0	1	23	118	140	118	140	0.97
5	15	6.4	6.8e+02	2.1	0.1	1	9	147	155	147	159	0.89
6	15	0.12	13	7.5	0.5	3	23	226	247	225	247	0.95
7	15	0.06	6.5	8.5	1.1	1	16	254	268	254	272	0.80
8	15	6.3e-06	0.00067	21.0	0.3	1	23	282	305	282	305	0.91
9	15	0.00011	0.012	17.0	0.2	1	23	314	337	314	337	0.95
10	15	0.0041	0.44	12.1	0.2	2	23	343	366	342	366	0.95
11	15	0.99	1.1e+02	4.7	0.5	3	23	373	393	373	393	0.96
12	15	0.012	1.3	10.7	0.2	1	23	398	420	398	420	0.92
13	15	0.00016	0.017	16.6	2.0	1	23	426	448	426	448	0.97
14	15	0.00054	0.058	14.9	1.1	1	23	454	476	454	476	0.98
15	15	1.1e-05	0.0012	20.2	3.1	1	23	482	505	482	505	0.98

Sequence Information

Coding Sequence: ATGGCTTCGCCGACGCAGCCGGAGGGCGCGGGCTGGCTGGAGCAGGCGGAGACCGTGCTGGGCCGCAAGCTCACCTCCATAGACTTGGTTGGCGGCATATACTGCAGCATCTGTCAGTCAACATTCGGTAACAAGAAGGACTATGACTCTCACTACGTGGACCACGACATAGGCGATGCAGACATAGGCTACACTTGTGTTGTGTGCCGCAAACAGTTCACTGGCTACCCAAGCTTCCGCAACCATTGCTACTTGATTCACGTTGCTAAGAACAAGCACAAGTGTATTCATTGCtccaaaacattttcaaaacaatCAATTCTGAACAGTCACATCGACACAGCTCACAATTTCAAATGTGAGCCTTGCCAAAAACAATTTCCATCTAAAAAGGAACTACACACACACCAAATTATCCATGGCAAGGACAGACCTCCATACAATTGTCAAGAATGTGGGGAGACGATCGAGAGTATAGACATGTGCGAGTTCCACATCGACGAGCACTGCACCGCTCTGTACTCGTGTCCCATCTGTAACGATGACACCACCAACAACAAACTGGATGCCGCCAAACATCTCACCAAACACTTTGGCGAAGTACTTATAGACAAATATGTTTCTGATTCCAAAATTGGTGAAGACTGCTCCATAGACATCCTTGGAGGAGTCCTCTGTAACTACTGCGATGAGTTATTCAAGAATAGATTAGAGTTCGACACACACTTTGCAACAGAACATGGCGACCGGCCGTTGGTTTACTCCTGTAACATTTGTGGGAAACAGTATGACAAGTATCATTTGTTCGGTGACCACTGCTACAACCACATGACCAAAGGAAGATTCGAATGCACCGACTGCGGCAAGACGTTCCCTCGTCTGTCGCTGCTGGTGACCCACACGGACGCCTACCACTCGTCGGGCTCGTTGGAGAAGCCGTTCTTGTGCGGAGAGTGCGGGCGCGGCTTCAAGTCGCCCAACCGTCTGCGCGAGCACACGCGCGTCGTGCACTCCACCAACACCATGCGCTGCACGGAGGGCGGCTGCGACATGTTGTTCTCGTCGCTGAAGGAGCTGCTGCTGCACCAGCGCTCGCACCGCGCGCACGACAACTGGTGCCGGCAGTGCGGGCTGCAGTTCGTGTCGCTGGCGGCGTGCGAGCGCCACCTCGACGTGCACCGCAAGAAGCACTACGCCTGCCCCGTGTGCCGCCGCTCCTACCGCGAGAAGTACCTCATCCTCAAGCATATACCCACTCATTTTGAGTGCGTGCTGCATGTTTGTAAAGTTTGTGGCAAGGTATTCAACCTGCGCAGTCGTCTGGTGCAGCACTCGAAGACCCACTCCGACCTGCGCGCGCACAAGTGCGACGTGTGCAACAAGGGCTTCCTGAAGGCCTCCATGCTGCAGCAGCACCTCAACATCCACACCGGCTTCCGCCCCTACAAGTGCACTGGGTGCTCCAAGACATTCGCCAGCTACCCCAACTGGCACAAACACATGCGCCGCATGCACAACCTCGAGAAACAAGACAACAgaaaggaaaagaaaaataaatttgtcaCCACGCCTGAACTACCATCGCCACCCCCTGTAACCGCAAACGATAATAACGACGCCAAAATGAAAGTCGAATCGGGAATCGATTCTACCAGTTCGGAAATGTCACTAGAGACATACATTTTTACTGAGTCGGATGACAGCACCATGGACAGTCTGGATCCGACGGTCATAGAGAAGGATTGGTGCATCTCGAATGAAAGCTCTATAATAGACGATAGTCTACAGTATACAGATATGTTGCCGGTCAATAATACTACATTTGATTTTGAAGTATGTGAGCAAGAGAGCGTggtgggcgcgggcgcggggctgGTGCTGCGCGAGTACGGGCCCGAGTTCAACGTGCTGCTGGCGGACGCGTCGGGCCCCTGCATCGACCTGGACGAGCACTACCTGCCGCACATCGACCCGCGGCTCACCATCAAGGCGCCGGGCGCCGCCCCCGCGGGCGCTGCGCCCTGGGAGCCGCGCATCACCAAGGTGTACAGCGCCTACGACGACCCCGACCTCGACCGACTGGCCATCCTCAACGCCGACATATACTAA
Protein Sequence: MASPTQPEGAGWLEQAETVLGRKLTSIDLVGGIYCSICQSTFGNKKDYDSHYVDHDIGDADIGYTCVVCRKQFTGYPSFRNHCYLIHVAKNKHKCIHCSKTFSKQSILNSHIDTAHNFKCEPCQKQFPSKKELHTHQIIHGKDRPPYNCQECGETIESIDMCEFHIDEHCTALYSCPICNDDTTNNKLDAAKHLTKHFGEVLIDKYVSDSKIGEDCSIDILGGVLCNYCDELFKNRLEFDTHFATEHGDRPLVYSCNICGKQYDKYHLFGDHCYNHMTKGRFECTDCGKTFPRLSLLVTHTDAYHSSGSLEKPFLCGECGRGFKSPNRLREHTRVVHSTNTMRCTEGGCDMLFSSLKELLLHQRSHRAHDNWCRQCGLQFVSLAACERHLDVHRKKHYACPVCRRSYREKYLILKHIPTHFECVLHVCKVCGKVFNLRSRLVQHSKTHSDLRAHKCDVCNKGFLKASMLQQHLNIHTGFRPYKCTGCSKTFASYPNWHKHMRRMHNLEKQDNRKEKKNKFVTTPELPSPPPVTANDNNDAKMKVESGIDSTSSEMSLETYIFTESDDSTMDSLDPTVIEKDWCISNESSIIDDSLQYTDMLPVNNTTFDFEVCEQESVVGAGAGLVLREYGPEFNVLLADASGPCIDLDEHYLPHIDPRLTIKAPGAAPAGAAPWEPRITKVYSAYDDPDLDRLAILNADIY*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01527623;
90% Identity: iTF_00974033;
80% Identity: -