Hdys030897.1
Basic Information
- Insect
- Hecatera dysodea
- Gene Symbol
- ZFY
- Assembly
- GCA_905332915.1
- Location
- HG995312.1:11796699-11799678[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.25 27 6.5 8.2 1 23 150 173 150 173 0.97 2 18 0.00029 0.032 15.8 0.9 1 23 182 205 182 205 0.96 3 18 0.032 3.5 9.3 0.4 2 23 218 240 218 240 0.97 4 18 0.00041 0.044 15.3 0.8 1 23 249 272 249 272 0.97 5 18 0.00032 0.034 15.7 2.9 1 23 284 307 284 308 0.96 6 18 0.00014 0.015 16.8 0.7 2 23 336 358 335 358 0.97 7 18 0.0014 0.15 13.6 1.2 2 23 368 390 367 390 0.96 8 18 0.04 4.3 9.1 0.5 2 19 395 412 394 415 0.92 9 18 0.00059 0.064 14.8 0.5 2 21 420 439 419 442 0.94 10 18 0.38 40 6.0 2.2 3 23 452 473 451 473 0.93 11 18 0.00078 0.084 14.4 3.5 1 23 478 501 478 501 0.94 12 18 0.00011 0.012 17.1 3.1 2 23 514 536 513 536 0.97 13 18 0.16 17 7.2 0.4 1 23 564 587 564 587 0.92 14 18 0.91 98 4.8 0.1 2 23 594 615 593 615 0.90 15 18 0.019 2 10.1 1.4 2 23 621 642 620 642 0.97 16 18 8.8 9.4e+02 1.7 1.8 3 23 650 672 648 672 0.88 17 18 0.019 2.1 10.0 0.1 1 23 708 730 708 730 0.97 18 18 0.084 8.9 8.0 1.9 1 23 736 759 736 759 0.97
Sequence Information
- Coding Sequence
- aTGGATCCAGAAGTAAAGGTTAAGATAGAAGAAGTTGACGCAAGAAAAGACCCTACCTCATTTTTGCCAGAGGAGCCAATGTCCtatgaaattaagaaaaaaaagaaaaagaaaaaaaagaagcaaGAAGACCCGTTTAAAGATATTGAcgacgtgaaaatgggcgttaaGATTGAGCCCATAACTTTATTGGATCCGGAGGTGAAGATAAAAGTAGAGGATATTGAAGTGGAATTGGATTTTAATGATTTTGGAGACAGCGGTCTGATGCCCGAAGGTACATATAATAATGAAGAAGAGCCAGCCGTGAAGATAGAGCCACAAACAAACCACGACGCCGTACTTCTCACCTTCGAGAGCGTTATCAGCGATAAACCACTAGTGGCCAATAGCACAGAAATGTTCCCATTCTCAAGTACCGCCCTCCCCACCGAACAAGCCCCCAACCACGTCTGCAAGGTCTGCCATCTAGTCTTTCAATCTCACAAAACGATGCGGATGcatcaaaaaagaaaacacaagtCATTCAGAAAGTCCTTCAAACACATTTGTGATTACTGCGGCATGTCCTATGAAATGAAGAACAGTTTAGTAGCtcatataaagaggaaacacgGACCTGATTCTCAGCCAGACGACAGGGAGGAACGGACCTGTGAGATATGTGCTCTGGTGTTTAAAGGGATGCCTCGCTTACGTATGCATATGAGGAGGAAGCACGGATCCTTCCAAGAATCATTCAACCACGTTTGTGACGACTGCGGTTTAACATATGATAAGTACAGAAGTTTGATAGTCCATATacaacgtaaacattcaaaTAATCAGAAGCCTGAAATCAACCGATGGTACAATTGTCCGTTCTGTCCTAAGATATTCACTAAGAGGGAGACGTATGCCAGACACGTGCAGAGAAAGCATCACGTTTCAGACGAGAATATTAAACAAGAAAATGAAAACGAAACGGATTTGGTGAATTGTAAAAATGAAGAAACCGGTGAGATAACTTGTAAAGAGTGCCCTCTAGTCTTCTCATCTATTAATTTCTTGAAACTACATATGCGAAGGAAGCATAATGCGTTAAGAGATAACTTCCGGTTGAAGTGCAGGATTTGTAACTTGTCTTACGATAAAATCGAGAGTTTGAAGAGGCATGTGAGGAGAAAACACGATAAAGGTTCTTATTGTGAAGTTTGTAATAAGCAGTTTGATACGCGAGAGATGTATCTCAACCATTCTCACGTAAAAGCTATAAAGGAGTGCAATATTTGTGGCCTGATTTTTGCGTCGCAAGGTGGTTTAGCGAAGCACTTGCGGTGCACACATAAAATAGACTCGCCCAAAACAGTATTCTGCAATCTATGCAATGAAGGTTTTCACGACAAACGACAGCTGAAACCGCATTTCATGAAAGTGCATTTAAAAGTATCTTACACTTGTAGATATTGCAAAAAGATATTCAAAGCAAAGGAGAGTTATCGACGGCATATATTATTCAAACATCCTAACGGGACACATTTCAACAACGCTCAGAGGCAAAAATGTGAACAGTGCAGCGAAACTTTTAAGGACGAATTTGATCTTTGTCGTCATATAAATACGTTTCACGGTCGCCCTGAAGAAGATATGACGAAAGAGGAGAGAGAAATATTGCAAATAAAAAGAGAAGATCCTGATATTAAGGACTGTTTTCAGTGCACTAAGTGCCCTGATTCGTACTTAACTTGGGAACAGTTAAAACTTCACTATGAAGCAACCCATCACAACATAGAAGAAACCCAGTGTCAAGTGTGTGGGGAGATACTCCCAGGGAATGAATTACAAAAACATATAAAGAGTCGTCACACAGATACTGAAATGCAGTGTAAATACTGTgaatttaaaactaatattagaGTTAGTTTAACACAGCACATGTTAAGGCATAAGAATGCTGAAACAATTCACTGTGAATACACTGGTTGCAGGTACAAAACGTTTTACGAAGGTGCTATGGAGAAACATAAGAGAAAACATGCAGATTTAGGAGTAAAACTCCAATGTACGCAGTGTCCGTTCCAATCTATGAACAAATACATCTTGAAATATCACGAAGAAGCCCATGAAACTGGCAAAAAACGATACATGTGTGATCAATGTGATTATGCAACGATTTTACCAGCAAATCTTGTACAGCATAAATATAAGCATTCAACAGAGAAAAGGTTCAAATGTGAAGTTTGTCCATTCGCAACGAAATACAATACATCACTGCGGTTCCATGTTAGGAAAAAACACTGTGATCTACCGACATTcagttaa
- Protein Sequence
- MDPEVKVKIEEVDARKDPTSFLPEEPMSYEIKKKKKKKKKKQEDPFKDIDDVKMGVKIEPITLLDPEVKIKVEDIEVELDFNDFGDSGLMPEGTYNNEEEPAVKIEPQTNHDAVLLTFESVISDKPLVANSTEMFPFSSTALPTEQAPNHVCKVCHLVFQSHKTMRMHQKRKHKSFRKSFKHICDYCGMSYEMKNSLVAHIKRKHGPDSQPDDREERTCEICALVFKGMPRLRMHMRRKHGSFQESFNHVCDDCGLTYDKYRSLIVHIQRKHSNNQKPEINRWYNCPFCPKIFTKRETYARHVQRKHHVSDENIKQENENETDLVNCKNEETGEITCKECPLVFSSINFLKLHMRRKHNALRDNFRLKCRICNLSYDKIESLKRHVRRKHDKGSYCEVCNKQFDTREMYLNHSHVKAIKECNICGLIFASQGGLAKHLRCTHKIDSPKTVFCNLCNEGFHDKRQLKPHFMKVHLKVSYTCRYCKKIFKAKESYRRHILFKHPNGTHFNNAQRQKCEQCSETFKDEFDLCRHINTFHGRPEEDMTKEEREILQIKREDPDIKDCFQCTKCPDSYLTWEQLKLHYEATHHNIEETQCQVCGEILPGNELQKHIKSRHTDTEMQCKYCEFKTNIRVSLTQHMLRHKNAETIHCEYTGCRYKTFYEGAMEKHKRKHADLGVKLQCTQCPFQSMNKYILKYHEEAHETGKKRYMCDQCDYATILPANLVQHKYKHSTEKRFKCEVCPFATKYNTSLRFHVRKKHCDLPTFS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00327297;
- 90% Identity
- iTF_00974040;
- 80% Identity
- -