Basic Information

Insect: Hecatera dysodea
Gene Symbol: -
Assembly: GCA_905332915.1
Location: HG995299.1:9790884-9804726[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00044 0.047 15.2 0.2 2 23 141 162 140 162 0.93

2 10 0.00063 0.068 14.7 2.4 1 23 168 190 168 190 0.96

3 10 7.3e-05 0.0078 17.7 0.3 1 23 282 304 282 304 0.98

4 10 0.00066 0.071 14.6 0.0 3 23 383 404 381 404 0.90

5 10 0.00021 0.022 16.2 0.1 1 23 419 441 419 441 0.97

6 10 1.5e-05 0.0016 19.8 0.2 1 23 473 495 473 495 0.98

7 10 0.00068 0.073 14.6 0.2 1 23 501 523 501 523 0.97

8 10 0.00038 0.041 15.4 0.3 1 23 529 551 529 552 0.95

9 10 0.01 1.1 10.9 1.1 1 23 565 587 565 587 0.96

10 10 0.031 3.4 9.4 0.0 1 20 748 767 748 770 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00044	0.047	15.2	0.2	2	23	141	162	140	162	0.93
2	10	0.00063	0.068	14.7	2.4	1	23	168	190	168	190	0.96
3	10	7.3e-05	0.0078	17.7	0.3	1	23	282	304	282	304	0.98
4	10	0.00066	0.071	14.6	0.0	3	23	383	404	381	404	0.90
5	10	0.00021	0.022	16.2	0.1	1	23	419	441	419	441	0.97
6	10	1.5e-05	0.0016	19.8	0.2	1	23	473	495	473	495	0.98
7	10	0.00068	0.073	14.6	0.2	1	23	501	523	501	523	0.97
8	10	0.00038	0.041	15.4	0.3	1	23	529	551	529	552	0.95
9	10	0.01	1.1	10.9	1.1	1	23	565	587	565	587	0.96
10	10	0.031	3.4	9.4	0.0	1	20	748	767	748	770	0.93

Sequence Information

Coding Sequence: ATGGATGGGGAAGCTGAAGACTTCAACCTCCAATGGGAGGAAGAAGTTGAAGTCAAGCACAGTCCAGGTGCTGGAACAGAGGAAGTGATATCAGGCCTGGAAAATGTACAACATACAGGATATTCAAACATGACAGCCGAAGAGATGATGAGCACGGACCAAATGGCTGCAGAAAACTTAATGTTTTTATCTCAAGACGTCGTGAGTTACACTGAGGCAGCCGATCTTGCTGTTGATCCTAGTGTGGAATGTGTCACGGAAGAGGTCATTACGGACGATTGGGTGATTCCTGGTGGGCAGGAAAGagtcGAAGTTCCTATGGATCATTTGAATAATGCTGATTTGGTTCCGAAAGAAGAAAATGACCTTGATGTTCCTTTACCAACAGATCAAGATGAATACACAGCGATGCGACCTTGGCCCTGCGACTTCTGTTCGCGGAGGTTTCGTAAGAAGGCGGCTCTCATGAACCACATGGTGGCCCATCAAAACGACCGGCCGCACGCGTGTAACTTGTGTGGTGTGCGATACGTGCGCAAGTGCGACCTCATGAACCACCTCAAGGTTCACGCCTTTGTGCCTGACAACCCCGATTCTATAGATTATGAGGATGTTTTAGACAATAACCAAATTATAAAGCCAAAGAAGAAGCGAGGTCGACGGAAAAAGAACCCTGAACCTGTGGAGGAGAACGGAATGTGGGAGAACATGACGTCGGCACGCACGCAGCAATGGTCGAGGCGCGCGCGCTCGCCGGCACGCCCGCCACCAACGCCACCATcaccgcccgccgcgccgccgcccccctcgccgccgccacctccCAGCGACCCCTCGCGCCCCTTCGTGTGCCGCCACTGCGGAGTCGGCTTCGCACGGGAGAAGGCGCTGCAGTCGCATGCCAGAGTGCACGGCGGCGACTCGCCGGTGGAGTGCGGCTCGTGCGGTGAGCTGTGCTGGTCGCGCGAGGCGCTCGCGTCGCACACTGCACAGCGACACCCGCACCTGCCTCCGCGCGACCAGCCGCCCGACCCGCCCTACGAAGACTCCGATTCGGGTGACGACATGGAGTTTCGCCTTTCTCCGTTATCTCACGGTGCTAGTGAGCGCGCCGTGTACGACACGATGCGCGGCCCTGAGCTGTTCTGTCAGGACTGCGGCGTGGCCTTCCAGCGAGCTGATCTACTGCGGAGACACGTGGCTGCAGCTCACAGttacAAGAGGCACGACAGCTCCAGCAGCACTTGGGCGGAGCACACGTGTGACGTGTGCGGCGAGGGCTTCACGGACGCGCTGCAGCTGCTGGCGCACGCCGAGACGCACGCCGAGCGACACCGCACCACGCACTCGCAGCCCAGGTTAAAAAGAATGGCTAGAGGTCGAAACAATACGTCATCATCGAATAGCTCGCGTCAATTTCCTTGTAGAGTCTGTGGTAAGGTGTTCGGTTCGCGGAGCTCGCAACAGATTCACATCCGCATCCACACGGGCGAGCGGCCCTACGCGTGCCGGTTCTGTTGGAAGGCATTTGCGGACGGTGGCACCCTGCGGAAACATGAGAGGATACATACGGGAGAGAAGCCGTACGCGTGTGCGGTGTGTCCGCGCGCCTTCAACCAGCGCGTCGTGCTGCGCGAGCACGTGCGCTCGCACCACTCCGCACCCGACCGGCGCGCCAACGGTGGTCCCGCGTACTGCTGTGTAGTATGCGGGCGCACGCTGCACTCGAGCGCGGAGCTGGTGCAGCACCTCATTCAGCACTGCGACGCCAACACGGCCCTCAAGAGACAACCACAGACGGGGCCGCGGAAGTACAAGAGACGGCGAAAATTGAAGACCGAGTCTCCAGCGACACCACGCGGCTGGGGGCACCGCTCTCCCTCCCCGCCGCCTGCGTCCCGCTCCCCCTCGCCGTCGCCGTCGCCCTCCCACACGCCGCAGCTGTCGCCCGCGTCGCCGCCCGAGCCCGCCTCGCCTgcgcgccggcgccggcgccgtgCCCCCGAGCCCGCGCAGCGCCCGCGTATGATCCACACGGAGGAGCGCGCGCGCACTAGACacagcccgccgccgcgccgccgccgggcGGCCCGCGCGCCGTCGCCGCGCTCGCCTGCGTCGCCGCCGTCCCCGGCCCGCACGCGGGTGGCGCGGCGCCGGCCGCCGCGGCACCCGGCGGACGACCTGCGCGCCATCCAGCCGCGCGAGCCGTCCGCCGAGCCGACGGACGCGGGCGGGCCCTACAAGTGCGAGATGTGCGCGCTGGAGTTCCCGCGGCGCGACGCGCTGCTGCTGCACGTGCCGGTGCACATCTGA
Protein Sequence: MDGEAEDFNLQWEEEVEVKHSPGAGTEEVISGLENVQHTGYSNMTAEEMMSTDQMAAENLMFLSQDVVSYTEAADLAVDPSVECVTEEVITDDWVIPGGQERVEVPMDHLNNADLVPKEENDLDVPLPTDQDEYTAMRPWPCDFCSRRFRKKAALMNHMVAHQNDRPHACNLCGVRYVRKCDLMNHLKVHAFVPDNPDSIDYEDVLDNNQIIKPKKKRGRRKKNPEPVEENGMWENMTSARTQQWSRRARSPARPPPTPPSPPAAPPPPSPPPPPSDPSRPFVCRHCGVGFAREKALQSHARVHGGDSPVECGSCGELCWSREALASHTAQRHPHLPPRDQPPDPPYEDSDSGDDMEFRLSPLSHGASERAVYDTMRGPELFCQDCGVAFQRADLLRRHVAAAHSYKRHDSSSSTWAEHTCDVCGEGFTDALQLLAHAETHAERHRTTHSQPRLKRMARGRNNTSSSNSSRQFPCRVCGKVFGSRSSQQIHIRIHTGERPYACRFCWKAFADGGTLRKHERIHTGEKPYACAVCPRAFNQRVVLREHVRSHHSAPDRRANGGPAYCCVVCGRTLHSSAELVQHLIQHCDANTALKRQPQTGPRKYKRRRKLKTESPATPRGWGHRSPSPPPASRSPSPSPSPSHTPQLSPASPPEPASPARRRRRRAPEPAQRPRMIHTEERARTRHSPPPRRRRAARAPSPRSPASPPSPARTRVARRRPPRHPADDLRAIQPREPSAEPTDAGGPYKCEMCALEFPRRDALLLHVPVHI*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01064911;
90% Identity: iTF_00974019;
80% Identity: -