Hdys012068.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Hecatera dysodea
Gene Symbol
-
Assembly
GCA_905332915.1
Location
HG995295.1:15010857-15027531[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 8.9e-05 0.0095 17.4 2.2 1 23 430 452 430 452 0.97
2 20 0.0046 0.49 12.0 0.6 1 20 458 477 458 480 0.94
3 20 2.3e-05 0.0025 19.2 5.6 1 23 499 521 499 521 0.98
4 20 0.00011 0.012 17.1 4.1 1 23 527 549 527 549 0.99
5 20 4.1e-05 0.0044 18.5 5.3 1 23 555 577 555 577 0.97
6 20 9.4e-06 0.001 20.5 7.4 1 23 583 605 583 605 0.97
7 20 7.9e-07 8.4e-05 23.8 2.9 1 23 611 633 611 633 0.97
8 20 0.00011 0.012 17.1 6.7 1 23 639 661 639 661 0.97
9 20 0.00011 0.012 17.1 6.5 1 23 667 689 667 689 0.97
10 20 5.4e-07 5.8e-05 24.4 1.9 1 23 695 717 695 717 0.98
11 20 1.1e-05 0.0011 20.3 7.7 1 23 723 745 723 745 0.98
12 20 0.00015 0.016 16.7 6.6 1 23 751 773 751 773 0.97
13 20 1.1e-05 0.0012 20.2 4.4 1 23 779 801 779 801 0.98
14 20 7.3e-06 0.00079 20.8 5.0 1 23 807 829 807 829 0.96
15 20 1.2e-05 0.0013 20.1 5.2 1 23 835 857 835 857 0.98
16 20 5.3e-05 0.0056 18.1 6.7 1 23 863 885 863 885 0.98
17 20 1.3e-05 0.0014 20.1 7.7 1 23 891 913 891 913 0.97
18 20 3.6e-05 0.0038 18.6 6.6 1 23 919 941 919 941 0.97
19 20 0.0008 0.086 14.4 0.3 1 23 948 970 948 970 0.96
20 20 0.34 37 6.1 4.9 1 23 982 1004 982 1004 0.99

Sequence Information

Coding Sequence
ATGAATCAGGATCACCATAATATGAATACGGGTGGTGGCCAGCCTCCGGGAAGTTCTGAGGCACAGGGCCAAAGAGTTCAAGCCACCCAGCAACAACAACAGAACTTGCCTGCCACGACATCTGCTACTGATTTACGAGTGAACTCTGCAGCAGTGAACGTTGCTTTGTCTAGTGTCGCTAAATATTGGGTGTTTACAAATTTATTCCCCGGACCAATACCGCAAGTGTCTGTATACGGATTACCTGCCGGTGCCAGGATTGAAAATGGAAAGCCTGTCCAGGACCTTGGTCAAGCTCATGCAAGTATACTGAATGGGGATCCAAATATTATACTAGGTCATCATGCAGGCCAGTCCCAAGTCACAGTATCTGCTCCCGGTGGACAGCAGATACCAGTGTCACAGATCATCGCCACTCAGTCGGGACAAACTCATgAAGCTCTTGTGGCCCATAGTCAACAACAAGCTGAGCTGGCAGCAGCCCAGGCTTCAGGAAACAACGCGCAGGTGTCAGTTAGTGCAGGCCAGGCCACTCACCAGCAGGTACCCAATAATCGGGTCGAGTTTGTACAACACCATAACATTGATATGGTAAATCACGTGGGACATCATTCTCAACAGCACATGATGCAGCAGCAACTGATGGCGCAGGCGCGACCAGAACACAGCAACCAACAGATACAACTGACGGTAAGCGAAGACGGTATAGTGACGGTGGTAGAACCGACAGGCACAAAAATGGTCGACAAGGAAGAACTCCACGAAGCCATCAAGATGCCCAATGACCACACTCTCACAGTCCACCAACTGCAGCAAATCGTGGGACAACAGGTAATAGACAGCGTAGTACGTATAGAGCAAGCGACTGGAGAGCCGGCGAACATCTTAGTGACCCACAATCCTGACGGTACAACGTCAATCGAAGCCAGCGCCGCCGACCCTCTGATTGTCAAGGATGAGAAGAGTGCTAACAAAATGGAGACTGCACAGTTTGCTTTACCTGCTGAGATAAAGGATATAAAGGGGATTGATTTGAAGAGTGTAGGAGCCATGGGCATGGAGGGTGCAGTAGTGAAAATATCAGCCGGTGCGTCAGAACACGATCTCCACGCGATGTACAAAGTCAATGTAGAAGATCTGTCACAACTGCTTGCCTACCATGAAGTCTTTGGGAAACTTAATTCTGAAGGGCAGCAACAACAAGCAAAGGTAATAAGCGAGGTGGAAGTCGAAGTGGAAGCCGGCACCAGCGCAGCTATGTCAGAAGCTGAATCCTCACCCGGCCACCACTCTTGTGATATTTGCGGGAAAATATTCCAGTTCCGATATCAACTTATTGTTCATAGGCGTTATCACGGCGAAAGTAAACCATTCACGTGTCAAGTTTGCGGTTCCGCATTTGCAAATCCTGTCGAATTGTCAAGGCATGGAAAATGTCATCTTGCTGGAGACCCAAACGAAAGGCACGCCAAGAGGATGGCGCAAGATAAGCCTTACGCGTGCACAACTTGCCACAAAACTTTCTCCCGTAAAGAACATTTGGACAATCACGTTCGTAGTCACACTGGAGAGACTCCTTACAGATGCGAATTCTGCGCGAAGACTTTCACCCGCAAAGAGCACATGGTCAACCACGTGCGAAAACATACGGGCGAGACTCCGCACCGATGTGATATTTGCAAGAAGAGCTTCACTAGGAAAGAGCACTTCATGAACCATGTTATGTGGCACACAGGTGAGACGCCGCACCATTGTACAATTTGCGGCAAGAAGTATACTAGGAAGGAGCATTTAGTGAACCATATGCGGTCTCACACGAACGATACTCCGTTTCGATGCGAACTGTGCGGCAAGTCGTTCACGAGAAAGGAACACTTCACCAATCACATACTGTGGCATACGGGAGAAACCCCTCACCGCTGCGACTTCTGTTCAAAGACGTTCACTCGCAAAGAGCATCTTCTGAACCACGTCCGACAGCATACGGGCGAGTCTCCGCACCGCTGCAACTTCTGCAGCAAGTCGTTCACGAGGCGGGAGCACCTCGTCAACCACGTGCGGCAGCACACCGGGGAAACGCCCTTCCAGTGCGGATACTGCCCTAAAGCGTTCACGAGGAAGGACCACCTCGTGAACCACGTCCGCCAACATACAGGCGAATCCCCTCACAAGTGTTCATACTGCACTAAGTCGTTCACCCGCAAGGAGCACCTCACGAATCATGTGCGACAACACACGGGCGAGTCTCCGCACCGATGTTCCTTCTGCGCCAAGTCCTTCACCAGGAAGGAACACCTCACTAACCACGTCAGACAGCACACGGGAGAAACGCCACACAAGTGCACGTTCTGCCCGCGGGCCTTCGCGCGCAAGGAGCACCTCAACAACCACATCCGCCAGCACACCGGCGTCACGCCGCACGCCTGCTCCTACTGCAGCAAGAGCTTCACCCGCAAGGAACATCTTGTTAACCATATTCGGCAACACACGGGCGAGACTCCGTTCAAGTGTACGTTCTGTTCAAAGTCGTTCTCTCGTAAGGAACATCTCACGAACCACGTGAACCTTCACACAGGAGCAACGCCCCACAAATGTCTCTTCTGCACAAAAACATTTTCCCGAAAAGAACATTTGACCAACCACGTCAGGATACACACGGGCGAGTCTCCGCACCGCTGCGACTACTGCCAGAAGACGTTCACTCGCAAGGAGCACTTGACGAATCATCTGAAGCAGCACACCGGCGACACCGCCCACGTTTGCAAGGTGTGCTCCAAGCACTTCACCAGGAAAGAACATCTCGTCACGCACATGCGGGCGCACAGTTGTGGCGAGCGTCCATTCAGTTGCGGCGAGTGCGGCAAATCTTTCCCGTTGAAAGGCAACCTACTGTTCCATGAACGATCGCACAATAAGAACAACGCCAATGCTGCCAATAAGCAATACCGTTGTGAAGTCTGCTCTAAAGAGTTCCTCTGTAAAGGCCATTTGGTGTCTCATCGGCGTACGCACGCGGAGTGGGCCGAAGGTGCCGCGGCGGGTGAACCTCCCGCTGAAACAGAAGACTGCACTGATAATAAGTGTATCAAAGTTGAGCCAGAACGAACTGAAAGGAAACATGAAGTCAGGACGACAGTTGAAACGAGACCAGCCGAAAGCAACGTCGCACAAAGTCAACCAAACACAGCTACTGTGATGATAACTAATAATCaaCAAGTGCGTCCGGCGAATGTGAACGTGAGCACAGTGGGCGCGGTAGGCACGGTGAGCGGCGTGAGCGTGGGCGTGGGCACGGGGCCGGGCGGCGTGGGCAGCGTGGGCGGCGTGGCGGCCACGTTCGCGCACGGCGTGGCGGCGCAGCACCACGCGGGCGCCAACATCGCGCACCACCCCGTCACCGTCAACTACTAG
Protein Sequence
MNQDHHNMNTGGGQPPGSSEAQGQRVQATQQQQQNLPATTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPAGARIENGKPVQDLGQAHASILNGDPNIILGHHAGQSQVTVSAPGGQQIPVSQIIATQSGQTHEALVAHSQQQAELAAAQASGNNAQVSVSAGQATHQQVPNNRVEFVQHHNIDMVNHVGHHSQQHMMQQQLMAQARPEHSNQQIQLTVSEDGIVTVVEPTGTKMVDKEELHEAIKMPNDHTLTVHQLQQIVGQQVIDSVVRIEQATGEPANILVTHNPDGTTSIEASAADPLIVKDEKSANKMETAQFALPAEIKDIKGIDLKSVGAMGMEGAVVKISAGASEHDLHAMYKVNVEDLSQLLAYHEVFGKLNSEGQQQQAKVISEVEVEVEAGTSAAMSEAESSPGHHSCDICGKIFQFRYQLIVHRRYHGESKPFTCQVCGSAFANPVELSRHGKCHLAGDPNERHAKRMAQDKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCTICGKKYTRKEHLVNHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSYCTKSFTRKEHLTNHVRQHTGESPHRCSFCAKSFTRKEHLTNHVRQHTGETPHKCTFCPRAFARKEHLNNHIRQHTGVTPHACSYCSKSFTRKEHLVNHIRQHTGETPFKCTFCSKSFSRKEHLTNHVNLHTGATPHKCLFCTKTFSRKEHLTNHVRIHTGESPHRCDYCQKTFTRKEHLTNHLKQHTGDTAHVCKVCSKHFTRKEHLVTHMRAHSCGERPFSCGECGKSFPLKGNLLFHERSHNKNNANAANKQYRCEVCSKEFLCKGHLVSHRRTHAEWAEGAAAGEPPAETEDCTDNKCIKVEPERTERKHEVRTTVETRPAESNVAQSQPNTATVMITNNQQVRPANVNVSTVGAVGTVSGVSVGVGTGPGGVGSVGGVAATFAHGVAAQHHAGANIAHHPVTVNY*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01030446;
90% Identity
iTF_01030446;
80% Identity
-