Basic Information

Gene Symbol
F54F2.9
Assembly
GCA_905332915.1
Location
HG995296.1:3366945-3381332[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.3e-06 0.0085 17.2 0.0 2 34 294 329 293 335 0.84
2 2 1.3e-10 2.1e-07 32.0 0.1 2 43 375 421 374 423 0.87

Sequence Information

Coding Sequence
ATGCGGTGGTGTTTACTGGGTTTTTTTACGCTTATTTTGGGCGCGCAGGCCTGGGATGACGGTGACTTGGAAGTGTTCGACGTGGTCGAAGAAGTTAACCAGAACTTTTACGAATTGTTAGGTGTTACACAGGATGCGACGCCATCAGAAATCAAGTCTGCATTTAAGAAGCTCACACTGAAACTCCACCCAGATAAGAATGATTCTCCCGATGCAGATGTGCAGTTCAGGAACCTGGTGTCCGTGCACAATATACTCAAGGACCCAGGAAAAAGGGAAAAATATAATGAGGTGCTCAAGAATGGTCTTCCAAATTGGCGCTCCGCCATATACTATTACCGCCACGTGAGGAAGATGGGCCTGGCCGAGGGTTCCATTAtcctcttcatcatcatcacattCAGCCAGTATGCTGTTGGTTGGGCGGCTTATGCTGAGAAAAGATTTACTGCGGAGCAATTGCTAAACAGCAGAGGCAAAAAGCACTCCAAGCGGTCAGGATTTGACCAGGGCATATCAGATATCTTGGACCAGCTTCCTAAACCCAGCGTGAAAGACACGTTGCCGTTCCAAATACCGAGGTGTGCGTGGTGGTTGGTGACCGCCATACCGTACGGGATCATAGAGCTTAGGAGACAGCTGAAGGAGAAAGAGGAGGAAGCTAAGAGGCAGAAAAAGAgGGAAGAAGAAGAACGAGCCCGAGCTGACCGCGAGGCGGCGGCCGCAGCGGAAGCCAAGGCTGCTGGTGGCTTGCGCAAGCGCCGCGGGTTCGTGCCGCCCGCCAGGGACGCGGACTGTCTGCTGGACCCCGTTGATGAGCCTGAGGGGGGGCCTGTCGTTGTGGCTGTTAAACAGCCAGCCGCCCCCGTGATAGCCGGGGGGCTGTGGACGGACGACGACCTGGCCGAGCTGGTGCGGCTGGTGAAGAAGTAcccgggcggcgcggcggagcGCTGGGAGCGCATCGCCGCCTGCATGGCGCGCAGCGTGCCCGAGGTCACGCACATGGCCGCCAAGCTCAAGGACAACTGCTACAAGATACCCGGCCACGAGCCCGACCTGCCGCCAGTCCTCGAGCCGCCCAAGAAGGTGAAAACGCGCAAAGCAGAGGAGACGTCCAGCGGCAACTGGTCGCAGACTCAGCAGAAGGCGCTGGAGAGCGCGCTCGCCAAGTACCCCAAGGGCGGCGCCGGCGACCGCTGGCAGAAGATCGCCAACGCGGTGCCCGGGAAGACCAAAGAGGAATGCATGCAGAGGTGTAAATATCTATCAGACATGGTCAGAAAACAGAAGCagaaggaagaagaagaagcacaGCAGAACGCAGAAAGTGAGAACATCACAGAAGATCAACAAGACGAAGAGTGA
Protein Sequence
MRWCLLGFFTLILGAQAWDDGDLEVFDVVEEVNQNFYELLGVTQDATPSEIKSAFKKLTLKLHPDKNDSPDADVQFRNLVSVHNILKDPGKREKYNEVLKNGLPNWRSAIYYYRHVRKMGLAEGSIILFIIITFSQYAVGWAAYAEKRFTAEQLLNSRGKKHSKRSGFDQGISDILDQLPKPSVKDTLPFQIPRCAWWLVTAIPYGIIELRRQLKEKEEEAKRQKKREEEERARADREAAAAAEAKAAGGLRKRRGFVPPARDADCLLDPVDEPEGGPVVVAVKQPAAPVIAGGLWTDDDLAELVRLVKKYPGGAAERWERIAACMARSVPEVTHMAAKLKDNCYKIPGHEPDLPPVLEPPKKVKTRKAEETSSGNWSQTQQKALESALAKYPKGGAGDRWQKIANAVPGKTKEECMQRCKYLSDMVRKQKQKEEEEAQQNAESENITEDQQDEE*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01075387;
90% Identity
iTF_00810014;
80% Identity
-