Hdys018962.1
Basic Information
- Insect
- Hecatera dysodea
- Gene Symbol
- -
- Assembly
- GCA_905332915.1
- Location
- HG995302.1:5603127-5605631[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.9e-07 8.9e-05 23.2 0.0 1 35 16 51 16 58 0.90
Sequence Information
- Coding Sequence
- ATGAGTTCTTCGGAgataagaaagaagaaagaaaaaagaacgtACACAGAAGAAGATTTAAGGAAAGCGTTGAATGAAATTCGAGAGAAGAAGAAATCGGTAAGACAAATATGCAAAGAATATGCTATTCCCAAGACCACAATATTGGACAAAATCAGTGGGCGCAGACCAGATGGAGTAAAGAAACCGGGCCCAGAACCTGCACTAGGAGTAGATGGTGAAAAAAAGGTAGTTGAATGGCTTCTTAACATTTCCAAATGTGGATTTCCAGTGAAAAAACAGGAACTGTTGGATACTGTTCAGAAAGTAATACGAGACGGggggtttaaaaataaatttaaagatgATCGCCCAGGTCAAAAATGGTTTGAAAAATTTTTGGCCAGAAATAAAGAAATCTCACTTAAAAATGCGGAGGGCATTAATAAAGCTAGAGCCCAAGTCACAGAAGAGTCAATCAGACTGTGGTTTCAAGAATTAGATCAATATTTGGACAGTATACAGCAAAAAGATCCGAAAAGAATTTTCAATGGAGACGAAAGTGGTTTCGCTCTTTGTCCAAAGACAGGAAAAGTTTTAGGCCCAAGAGGGTTCAGAAACTTATATCAAATAAAACCAAGTaacgaaaaagaaaacataacggtattattaacatttaatgCGAATGGAGATATGTGTCCACCTTGTATTGTGTTTCCATACATTAGACCACCAAAAGCTGTAGTGAATAGTATGCCCCAAGATTGGTGCTTAGGCAGATCGGAGACAGGTTGGATGAGAGGAGAAGTATTCTTCGAATACATCACCAACGAGTTTCACAACTGGATAGtggaaaataacattaaaaaacccGTGCTTCTGCTGGTAGATGGGCATAAATCGCATATGTCCTTAATGCTAAAAGTAGGATTTGCCGAGATTTCTATCGAAACTGAATCTGAGAAGTCACAAAATATGGAACTTTCAATAGAAAATAATAGTACAATTTTTAGTCCTATAGATTGTGAATTGGATGCAGCTAAAGAAATTTCCATCTGTTCATTACAAGAAGAAAGCGAAAACGAAAATGATCAAACTAACTCAGATCCTACTGTACAGGTTCAAACAGTATCTGCCCTAATACATTCACCACCAAAATCATTGGTCAAGACTTGCACATCAAAAATAACCACCAGCAACAGAAATCTAGCATCTGCTGAACTTGACGTGATATATCCAGATAATTCAACtctcgatacaaacaaaaactattcGTTTCCTGACTTGTCCCTTTCGACGTTACATATTTCTGGCAGTTACCTCGACGTCGGCTCTGTCGTGTCCTTAGACGACGTTCTAATTCTTCCATTTGAAGATATTGCATCATCGCCCATTATGTCTAGTGTTGAAAAAGAAACTCTTACTAAGGAACAAACGCCAGAATCGCCTTTGACTTCTTCGATTCATACAACATCAGTTGTATCGCTAAATCCTCGAGTACCACCAGCTTCAGCAGTTGTTGGAGAATTAACACAAAAGAAAACCTCTGATCCTTTTAAAAACCACCTGATGCTGCCTGAAATCACTAACAAAGCAAGAAAAGATAATCAAAGAACTCCAGCAGCCATATCTTCTGCTGCATGGAGAAAGTATTATGAAGATAAAGAGCAGATCAAGAACGAAAAGCAGGAAGCGATACGAAAAAGGAAGTTAGAACGAATagaaaaacaagaaaagaaaaaaactttaaaacacTCTCCAACGGTTCGTAAAACTATTCCGAAACGAAAAAAGGAAATGCATCCTCTTCAAAAAGTCACGAAGAAAACGGTAGATGTGGAAATTGAGAAAGAAAATTTACCAGCCGTGGAACGAGTGAAATGTCCTGAATGTGACGATATACTAATTTCAGATGTAGAAGACGACGATGAGAAAAACATTGGCTGTGACAAGTGTATTAGATGGTATCATCTGAAATGCACGCGATTAGTAGGATTAAGTTATTTAGAGGCCAAAGATAAGTCttttgaatgtgacttgtgtCAGTAA
- Protein Sequence
- MSSSEIRKKKEKRTYTEEDLRKALNEIREKKKSVRQICKEYAIPKTTILDKISGRRPDGVKKPGPEPALGVDGEKKVVEWLLNISKCGFPVKKQELLDTVQKVIRDGGFKNKFKDDRPGQKWFEKFLARNKEISLKNAEGINKARAQVTEESIRLWFQELDQYLDSIQQKDPKRIFNGDESGFALCPKTGKVLGPRGFRNLYQIKPSNEKENITVLLTFNANGDMCPPCIVFPYIRPPKAVVNSMPQDWCLGRSETGWMRGEVFFEYITNEFHNWIVENNIKKPVLLLVDGHKSHMSLMLKVGFAEISIETESEKSQNMELSIENNSTIFSPIDCELDAAKEISICSLQEESENENDQTNSDPTVQVQTVSALIHSPPKSLVKTCTSKITTSNRNLASAELDVIYPDNSTLDTNKNYSFPDLSLSTLHISGSYLDVGSVVSLDDVLILPFEDIASSPIMSSVEKETLTKEQTPESPLTSSIHTTSVVSLNPRVPPASAVVGELTQKKTSDPFKNHLMLPEITNKARKDNQRTPAAISSAAWRKYYEDKEQIKNEKQEAIRKRKLERIEKQEKKKTLKHSPTVRKTIPKRKKEMHPLQKVTKKTVDVEIEKENLPAVERVKCPECDDILISDVEDDDEKNIGCDKCIRWYHLKCTRLVGLSYLEAKDKSFECDLCQ*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00771859; iTF_00771860; iTF_00771861;
- 90% Identity
- iTF_00771861; iTF_00771859; iTF_00771860;
- 80% Identity
- -