Hdys014301.1
Basic Information
- Insect
- Hecatera dysodea
- Gene Symbol
- -
- Assembly
- GCA_905332915.1
- Location
- HG995297.1:16001312-16002211[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.3e-07 5.9e-05 23.8 0.0 4 39 18 53 16 58 0.87
Sequence Information
- Coding Sequence
- ATGGTTCGCCACTACCAAAGGAAGACAGAACGTGCCAAATGGAGCTTGGAGGATGTGGAGGCAGCCGTAAAGGATGTGACTAGTGGCATATTAATCTGTAAACGAGCCGCTCTTGAGTACAATGTGCCACGATCAACTTTGCAGCGAAAACTCGAGGAGTATAAATCAAAACAACACTTATCACCAACAAAACTAGGTAGTTTTAGACCGGTATTTTCAGCTGCTCAAGAGGAAGAGTTAGCTTCATATATCAAAGACATGGAAAGTAGATTATTTGGTTTGTCTCCAAAAGAAGTTCGTCAGCTGGCCTATCaattagcaacaaaaaataacatccCACATAATTTTGATCCGACTACTCAAACCGCTGGCGAGGATTGGTTAGCAAATTTTCTGAAACGCAATTCTTCTTTGTCCCTGCGCAAACCTGAAGCCACATCCGCTGCTCGAGCCATGGGCTTCAATCGCCAAGCTGTGAAggctttctttaaaattttagtcGAGACAGTCgataagtttaaaattacagCGGATAAAATTTATAACGTTGATGAAACCGGAATGACAACTGTAGCAAAAAGTCTTGGAAAAGTAGTGGCCACCAAAGGTAGGAAACAAGTTGGGTCGTTGTCATCGGCAGAGCGTGGGCAACTGTTTCCAGTCGAAATCTGTATGAGTGCTGCAGGGGTTTTCATGCCGCCAATGTTCATATTTCCCCGTCAGAGACTGAAACCTGGATTAATGGATGGAGCTCCTCCCAATTCTTGGGCAGAATGTAATGAGAAAGGTTGGATTACAAAGGAAATCACAAACTTATTAAACCATTTCAAGAAGAAATGGTTTAATAAGTTTGTGACCTGGTGCATGTCAGAGATGGGCCCACTGTTCTTGCGCCGGTGA
- Protein Sequence
- MVRHYQRKTERAKWSLEDVEAAVKDVTSGILICKRAALEYNVPRSTLQRKLEEYKSKQHLSPTKLGSFRPVFSAAQEEELASYIKDMESRLFGLSPKEVRQLAYQLATKNNIPHNFDPTTQTAGEDWLANFLKRNSSLSLRKPEATSAARAMGFNRQAVKAFFKILVETVDKFKITADKIYNVDETGMTTVAKSLGKVVATKGRKQVGSLSSAERGQLFPVEICMSAAGVFMPPMFIFPRQRLKPGLMDGAPPNSWAECNEKGWITKEITNLLNHFKKKWFNKFVTWCMSEMGPLFLRR*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00771866;
- 90% Identity
- iTF_00771848; iTF_01084179; iTF_00043413; iTF_00771808; iTF_00667298; iTF_01538675; iTF_00771865; iTF_00771866; iTF_01221437;
- 80% Identity
- iTF_00771848;