Hdys000231.3
Basic Information
- Insect
- Hecatera dysodea
- Gene Symbol
- -
- Assembly
- GCA_905332915.1
- Location
- HG995286.1:4499259-4501319[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-07 7.2e-05 23.5 0.0 2 38 16 51 15 54 0.93
Sequence Information
- Coding Sequence
- ATGGGGCGAATTAAAACAGCGAAAAGGAAAATTGGAGGTCATACAAAAGAAGAAATGTTGCAGGCTATCATGCTTGTAAAAAATGGACAATCAATACGTAAAGCAGCAATAGAATGCGGATTACCCTACCCAACTTTACGGAGATACGTAGAAAAATTTAAGTCCGACGAAACCACAAATTTAGTACCCAATTATGAAGTAAATGCTATTTTTACACATAACCaggaaaaagaattaaaagaaTACATTATAGATTGTTCTCTAAAATTTTATGGGCTTACTGCTAAAGATACACGAAGACTAGCTTACCAAATggcatttattaataaaataaaagttcctTCTTCATGGGAAGAGAAACATATTGCTGGAAAAGAGTGGTTAAGGtcattcaaaaaaaaacacacggaTTTGAGTCTCAAGAAACCTGAACCGTGCAGCTTGGCTCGAGCCTCGGCattcaataaatataatgtgcaaacattttttaaaaacttaaGAGAAGCTATGCAACGATCTCCTAACTTCGGTAACGGAACACGTGTCTATAATTTGGACGAAACCTCAACCACAACAGTACAACGCCCACAAAAAGTCCTTGCTCTTAAGGGGAGTAACGTATCCAAAGTTACGAGTGGAGAAAGAGGTGTTTTAGTGACAACTTGCTGCATTGTTTCCGCCACCGGTTATGCTTTGCCCCCAGCAATGGTCTTTCCAAGAAAGAAATTTCAATCTCATATGCTCCATGGCGCTCCTCCTGGGACTCTTGGTTTGGCTGCTTCATCTGGATGGATGAATGCAGACATCTTCGTAGATGTTATGAAACACTTCATACAACATACTTCCGCCTCAAAAGAAAATCCAGCTCTTTTGATTCTGGACAACCACGAAAGTCATTTGTCATTAGAAGCATTGAACATTGCTAAAACTGCTGGTGTTACAGTGTTGACACTGCCTCCTCATACTACCGCAAGATTACAACCATTAGATGTGGGATTGAATGGtccatttaaaactttttataactCTGCCGTCGATTCATGGCTACTCCGAAACCCCGGGCAGAATCTCACTATTTACCATGTAGCTCAATGCGCAGGCGAGGCCTATTTAAAAGCCATGACTCCGATTAATATCACCAACGCATTTAGGAAATGTGGAATTTATCCATACGACGAATCAGTTTTTACAGAAGAGGATTTTCTACCAAGCACTGTGACGGATAGACCCGATCCAAGAAGAGATGAAACAGATACAGATTGTGAATTTAATGAAAACCGTTCACCTCCTAAGACCCCCTCTCCTTCAATTTTACGAGACTTACCATCACAACAAATATGTAATGAGCTGGCATCCAAATACAATGAAAATGAACAGCAAGCTTCCACTTCAAGAGCAGTGGAAAGTTTTGTTTCTCCAAAAATGTTTAGGCTGCCATTAAAAGCCGGTCCAAGAAAGACTACAAAAAGAAGCAGACCTTTAGGCCGGAGTATGATAGCCACCGACACTCCTGAGAAAGACATAATAGCATcgcgaaaaataaaagttgaagTGAAAGCTAAAAAAGTAaagagtaatttatttaaagaaaagaaGACGAAGACAAAGAAAAGAGAAACTCCAATTATGGATGAAGATTCTAATTCTGAAGGCACTTTCTATGCTAGTGGTTCTTCATCTGGTGGAGAAAATTTCGTCAGTGACAGTGAAGACGATGAAGTTATTTTATCTGAAGACTTTCCACCACTTCGTAGAAAACCCAAAGCGgataattttgtaattattctGATTGAatcagagaaaaaaaagataaaatgctATTATGTTGCGAAGATTCTTGATGATACTCCTGAAGCTGAATATGACTACTCCGTttcgtatttaaaattaaaaagtaaattttatCACACATTTTGTGAGCCTATAGAGCCAGATATTGCAATGGTTACAAAAAATGATATCAAATATATATTACCGAACCCCAAGATAGACGGCAGCAGTCGCCGAACAGCAACGTTCAAGTTTCCAGTTAACCTATCTCTTTTGAACTTCCCTTTTTGA
- Protein Sequence
- MGRIKTAKRKIGGHTKEEMLQAIMLVKNGQSIRKAAIECGLPYPTLRRYVEKFKSDETTNLVPNYEVNAIFTHNQEKELKEYIIDCSLKFYGLTAKDTRRLAYQMAFINKIKVPSSWEEKHIAGKEWLRSFKKKHTDLSLKKPEPCSLARASAFNKYNVQTFFKNLREAMQRSPNFGNGTRVYNLDETSTTTVQRPQKVLALKGSNVSKVTSGERGVLVTTCCIVSATGYALPPAMVFPRKKFQSHMLHGAPPGTLGLAASSGWMNADIFVDVMKHFIQHTSASKENPALLILDNHESHLSLEALNIAKTAGVTVLTLPPHTTARLQPLDVGLNGPFKTFYNSAVDSWLLRNPGQNLTIYHVAQCAGEAYLKAMTPINITNAFRKCGIYPYDESVFTEEDFLPSTVTDRPDPRRDETDTDCEFNENRSPPKTPSPSILRDLPSQQICNELASKYNENEQQASTSRAVESFVSPKMFRLPLKAGPRKTTKRSRPLGRSMIATDTPEKDIIASRKIKVEVKAKKVKSNLFKEKKTKTKKRETPIMDEDSNSEGTFYASGSSSGGENFVSDSEDDEVILSEDFPPLRRKPKADNFVIILIESEKKKIKCYYVAKILDDTPEAEYDYSVSYLKLKSKFYHTFCEPIEPDIAMVTKNDIKYILPNPKIDGSSRRTATFKFPVNLSLLNFPF*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00072117;
- 90% Identity
- iTF_00072117;
- 80% Identity
- iTF_00771843;