Hdys027795.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Hecatera dysodea
Gene Symbol
nas-6
Assembly
GCA_905332915.1
Location
HG995308.1:13213503-13236648[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.1e-10 1.4e-07 32.1 0.0 3 41 20 58 18 62 0.87

Sequence Information

Coding Sequence
ATGCCGCgaatatataaaaagaaactGGGTACCCGTGAATACAGAAACTACTCTGAAGCGACGGTTAACGAGGCTTTAAGTCAAGTAGTCGACGGAAAGTTGTCCATCAGAGGTGCATCAGAGCAGTATAATATACCTTATGGAACCATTTATAATAGATATAAAGGAATGCATATGAGAAAACCTGGCGCTCAGACAGTTTTCTCAGAATCTGAGGAAAAAGCTATTCTCAAATCAGCTGCGAAGTGTTCCGATTGGGGGTATCCTCTAACATTGCTTGATATGAGATTTTTTGCAAAAGCTTTTCTAGATAAACAAGGGCGAGTGGTTACCAAATTCGAAAATAATCTTCCTGGAGTTGAGTGGGCATATTCACTTTTACGTCGCCACAAAGATGAATACTCGCAAAGAGTatcatcaaatattaaaaaagcaaGGGCAAAAGTATCTCATGacagtataaataaatactttgacaaTCTTACACCACTTATTAAAGATTTGCCGCCGtccaatatatttaattatgacGAGACGAACATGAGCGACGACCCTGGAAAAAAACAAGGCATTTACAGGCGTGGGGTCAAATATCCAGAGAAGATTATGAATTTCTCCAAAAGTGCCACTACAGTGATGATGTGTGGGTCTGCAGACGGTGTTCTCTTACCACCTTATGTGATCTACAAAAGTGTTCATCTTTATGACACATGGAAAGAAGGGGGACCACAGGGTGCACCGTGTTGTCAGAAGACCTGCTGTTCCAGTGGATCTCGATTTAACAGAACCAATAGTGGCTGGATTGACAGCATAACCTTTCGTGATTGGTTTAGGACCTCTTTCTTGCCGCATGCTAAAGCATTACCAGgtagaaaagttttgattggGGACAAcctgtcctcacacatagatgTTGATGTCCTCAATGAATGTGAACAGAATAACATTGATTTTGTCTGTCTGGTGCCAAATTCTACCCATCTGTGCCAGCCATTAGATGTGGCATTCTTTAGGCCATTGAAAGGCGCTTGGAGACACGTGTTAACTAACTGGAAAATACAAAATCCTCGACTGTCGACTGTTCCAAAAGATACTTTTCCACGGTTGCTCCAAAAGGCCCTAGAAAAGATAGACTCAGTCCAAGCTAAACCCAACACACCTTTTGCGAATGTCACACaaggagtaaaaagaaatttACTGAGCGCCTTTAAAGGCACTGGCATATTTCCCTTATCGAGAGATCAAGTGCTGAAAAGACTGCCTGTTTTAGAAAATGGTGACCCTACTAATGAAGCTGAAAGCTGTTTGACCAACTATCTCAAAGAACAGCGTTATGGTAGTCAATCAGCAGCTCCGAGAAGAAGAACACGGTTAAATGTGAAACCAGGCGCTAGCGTGTCAACTGCTGAGGTTAACCCAGACACGGAAGATGCCAATGACATAGAACCTTCTGATATGGATCAAGGAAACTTGCCCATCGCTACAGTTAATGTCGATGAGGCAATTCCTGTAGAGGAGAGCACCGACCAAAAACTGATCGAGAAACAACGGCAAGACACCCGTGACATGTGTAAGATCTTCAACTCAGAAGCCCTAAATAAAAGACTCCCAACAAAACCGCTACCTCTCGACAAATACAACAAAAGAAAGaaggaattaaaaataaaacaaaagaaggaagttatacaaaacaaaaaagcgcgtcgGATCAAAAGAGCGGTGGACAGTGTGAACCCAGCTTTAAACGTAGAAGATGAGCTTAGAGTTGAGTCGATTGTCGATAAAATATACGACGACTTGCTCGAGAAGGGACAGAAGATCGCTTATAGGCGTAAAGAAATTCCCACTCCCAAGACAACACAAAAAATTAAGTCTAAAGGCCACACCccGAACGACAAGTCTGGTAGAAGGTTCCCGTTCGTGCCAAACTTTATAGACACGGAGATTACCACTCACAGGGTTGACACTTTGATCGAAGACTTAGCGGGCTCTAAGCCAGTCCGTTTTAAACATTCCATTGTGCCATATTTCATTGACGCTAAAACTTATGACGTACATCTAGCAGAAATAATAACGAGAGCATTCGACTACTTTGAGAAGGCGACCTGTATCCGGATGCAACGCCTTCGAGAGAAGCCCACTGACCTGGAATCTCTTCTGAATGTCACTTGGTTGTACATCAGCAACCCTTCTGGCATCCGGCAGTGTGTACATAGCAATGAGATGCTTGAAATTCAAGGAGTTCAACATATAACATTGGGTTACGACTGCATGAGCCTTGGAGACATATCGCACGAGATCATGCACGTGCTTGGCTTCGCCCATGAGCACGTGCGCCCTGACCGGGACCAGCACATCACTGTCTTATGGGAAAACATTAAACCCGGTTACAAGCAGTACTTCGAGATTAAAAACGAAACCATTGTTGAGGGTCTGCCATACGACCACGCCAGCCTCATGCACTACCCCCCTCGAGCGTTCTCCAGGAATGGCAAACCCACCATCTTGACTGaaCCAGGCATCAAAATCGGTCAACGCGAAGCGCTCAGCGAAATGGACTTGGAAAAAATAAGCATAGTGTACTCAAACGAGTGCATCAAGCGCAACAGAGAGTACCTGCTGAAGACCTGCCCAGCCGCAGTCAGACCAGCACCACCAACCGCACACATCTTCCCGCAAGACATTACCGAATACTTCAAAGACAAAATTTGGCCCTACGGAGTAGTTACATACAAATTCGATGGAGACGTGGGATTTACTttggaagaaaaagaaaacattaggACAGTAATGAACCACATAAGTAATCAGACGTGTGTACAGTTCGTGGACATTAGCCAGACCGAGACCCTCGACGAGAGCCATGAGGATGAGCGCCATTATTCATCATCAAGCTACCACTTTGACACCGAAGAATTAGAAAATCTAATAGTATTAAGCGATTCCAATTCAGATGGTGATTCATATGCATATCCTAGTTCAGATATAGAAACTGAATGGAATTCAGTAGATTATGCTAAGAGCAATGCTGAGGGCAATGCTGAGGGCAATTATGAGCACAAGGACGGAAGGACAAGGATACTTCCAGACTCCTCAACCTCCATGGAGGCAAATCCTGgtttaagatttaaaattaactCCAACAGAATTGGAGATTCTGATAGAACTGCCAAAAAGATTGTTAAGACGATAAATAACAATGGTACTAAAGGTAATTTCGTCAAGAAAAATACTACCAAGTATAACACAAACAGGAAGGACGCCAATATTGGCGCCAACAGCAAAGTAAAGACGATTGTGGCCACTAGAAAGCGAACTGCTCGCCGAAAATTCAAATCAAGACGAGATTCAGATTCAGCGGAGAAAGACTTTGATGGCGTCCTGGTGCTGTCGCGGTCTAATCAACCAGGCTGCCCCTGTCCACCGTCCGGGAAACCAGTAGATGACAGCTATCCAAAGTTAAACATCAACACCGACTGCTTCAACACTGTGAATGATCTGCTGCACCTGTTCGGCCACGTGCTGGGGCTGGAACACCAGCACAATATGCACGACAGGGACTCTTACCTGCACATCCTGTGGGACGAACTTACGGAAGACGTGCGAGAAGAAATGAAAACTAAGCTGAAACCGGAAGCGTCCGTTGGCTACCCGTACGACTACCACAGCGTGATGCACTATCCTTGGATGCAGATCAAGAACGGAAAAACAAACATGATGTACCCTATATGGaACGATGGCTGGGCAATGGGACATTGGCAAGGATTAAGTGCTATAGACGTTGAGAAGATACAGCGCATTTACAACCAAGGCTGCTTAGATAGGGATTCCCTAAAAAAAGAACCGAATTACAACAATAGTAAACCAGAATATTCAACCGAGAATGAACATCCAGGAAATACAGACGATAACGAAGAACAAGGAAAGACTGACAAGAGTGAAGAACCAATAAATACAGACGAGAACGAAGAACCAAAAAATACAGACGATAACGAAGAACCAATAAATACAGACGAGAACGAAGAACCAAAAAATACAGACGATAACGAAGAACCAAAAAATACAGACGAGAACGAAGAACCAATAAATACAGACGAGAACGAAGAACCAAAAAATACAGACGATAACGAAGAACCAAAAAATACAGACGATAACGAAGAACCAATAAATACAGACGAGAACGAAGAACCAAAAAAGACAGACGAGAATGAAGAACAAAAAAAGACTGACGAGAATGAAGAACCAAAAAATACAGACGAGAACGAAAAACCAGAATATGAAGACGAAAACAAAGAAATTGAAGAGACGGATGCCAACGaagaaaataagtaa
Protein Sequence
MPRIYKKKLGTREYRNYSEATVNEALSQVVDGKLSIRGASEQYNIPYGTIYNRYKGMHMRKPGAQTVFSESEEKAILKSAAKCSDWGYPLTLLDMRFFAKAFLDKQGRVVTKFENNLPGVEWAYSLLRRHKDEYSQRVSSNIKKARAKVSHDSINKYFDNLTPLIKDLPPSNIFNYDETNMSDDPGKKQGIYRRGVKYPEKIMNFSKSATTVMMCGSADGVLLPPYVIYKSVHLYDTWKEGGPQGAPCCQKTCCSSGSRFNRTNSGWIDSITFRDWFRTSFLPHAKALPGRKVLIGDNLSSHIDVDVLNECEQNNIDFVCLVPNSTHLCQPLDVAFFRPLKGAWRHVLTNWKIQNPRLSTVPKDTFPRLLQKALEKIDSVQAKPNTPFANVTQGVKRNLLSAFKGTGIFPLSRDQVLKRLPVLENGDPTNEAESCLTNYLKEQRYGSQSAAPRRRTRLNVKPGASVSTAEVNPDTEDANDIEPSDMDQGNLPIATVNVDEAIPVEESTDQKLIEKQRQDTRDMCKIFNSEALNKRLPTKPLPLDKYNKRKKELKIKQKKEVIQNKKARRIKRAVDSVNPALNVEDELRVESIVDKIYDDLLEKGQKIAYRRKEIPTPKTTQKIKSKGHTPNDKSGRRFPFVPNFIDTEITTHRVDTLIEDLAGSKPVRFKHSIVPYFIDAKTYDVHLAEIITRAFDYFEKATCIRMQRLREKPTDLESLLNVTWLYISNPSGIRQCVHSNEMLEIQGVQHITLGYDCMSLGDISHEIMHVLGFAHEHVRPDRDQHITVLWENIKPGYKQYFEIKNETIVEGLPYDHASLMHYPPRAFSRNGKPTILTEPGIKIGQREALSEMDLEKISIVYSNECIKRNREYLLKTCPAAVRPAPPTAHIFPQDITEYFKDKIWPYGVVTYKFDGDVGFTLEEKENIRTVMNHISNQTCVQFVDISQTETLDESHEDERHYSSSSYHFDTEELENLIVLSDSNSDGDSYAYPSSDIETEWNSVDYAKSNAEGNAEGNYEHKDGRTRILPDSSTSMEANPGLRFKINSNRIGDSDRTAKKIVKTINNNGTKGNFVKKNTTKYNTNRKDANIGANSKVKTIVATRKRTARRKFKSRRDSDSAEKDFDGVLVLSRSNQPGCPCPPSGKPVDDSYPKLNINTDCFNTVNDLLHLFGHVLGLEHQHNMHDRDSYLHILWDELTEDVREEMKTKLKPEASVGYPYDYHSVMHYPWMQIKNGKTNMMYPIWNDGWAMGHWQGLSAIDVEKIQRIYNQGCLDRDSLKKEPNYNNSKPEYSTENEHPGNTDDNEEQGKTDKSEEPINTDENEEPKNTDDNEEPINTDENEEPKNTDDNEEPKNTDENEEPINTDENEEPKNTDDNEEPKNTDDNEEPINTDENEEPKKTDENEEQKKTDENEEPKNTDENEKPEYEDENKEIEETDANEENK*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-