Basic Information

Gene Symbol
kn
Assembly
GCA_905332915.1
Location
HG995297.1:14294402-14307280[+]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 7.1e-144 6.8e-140 468.2 0.0 181 387 42 256 39 263 0.98
2 2 1.8e-08 0.00017 21.1 2.4 419 469 264 316 257 398 0.82

Sequence Information

Coding Sequence
atgcGGGAACAGATGTGTGGCGCCGCAGGCACCACAAATACGTACGCGCGGTACCAGCCCGCTCCTATCGGGATACGTTTTTACCATTTGTATGGAGCTGTTGTAACGTCTAAAAACGGAAAGAAGAGGTTTTTCTTGAAGTTCTTCCTGAAATGCAACCAGAATTGTTTAAAGAATGCGGGGAACCCTCGAGATATGAGAAGGTTTCAGGTGGTAATATCAACGCAAGTGATGGTGGACGGTCCTCTCCTAGCGATATCCGACAACATGTTCGTGCACAACAACAGCAAGCATGGCCGGCGCGCGAAACGGCTAGACCCTAGCGAAGGTCTATACCCTCCTCTGCCGGTAGCCACTCCATGCATCAAGGCGATATCACCGAGCGAAGGATGGACGTCGGGGGGCTCGACAGTCATCATAGTTGGTGACAACTTTTTTGATGGACTACAAGTTGTATTTGGAACCATGCTGGTTTGGAGTGAGTTGATAACATCGCACGCGATACGAGTGCAGACCCCCCCGCGACACATACCCGGCGTGGTGGAGGTGACGCTGTCGTACAAGAGCAAGCAGTTCTGTAAGGGCGCGCCCGGGAgatttgtttatgtttCAGCGTTGAACGAGCCAACGATAGATTACGGCTTTCAGAGGCTACAGAAACTTATACCCAGACATCCTGGAGACCcggaaaaattaccaaagGAAATAATTCTCAAAAGAGCAGCGGACTTGGCGGAGGCGCTCTACTCGATGCCCCGCAACAACCAGTTAAGTCTGGGCGCGCCGCGGTCACCGCCCGCCAGCATGCCTTTCAACTCGTATACAGGACAGCTGGCCGTCAGCGTGCAGGATACTGCGGCCTCGCAGTGGACCGAAGAGGAGTACGCGCGCAGTGGTGGCTCAGTATCGCCGCGGTACTGTTCTGCCGCGTCGACGCCGCATGCGGCTCCCGCAGCCTACCCGCATCCACAACACTATCCCGCCCCGCCGACCTCACTCTTCAATACTACGTCTCTGTCTCTAGGACCGTACCACCCAGCGAACATGAATGGACACTTATCATCTGACCGTCACTATAACGCGTATAATACGAAAGATAGCGGTCATTACAGAATGGGTGGCCTCGTATCATCGCCATTCAGCGTCAACCCGTTCTCTTTACCAACTTGCAGTGCTCAACAATATGCTCAGACCGCTCCGCTCGCTTCCAAGTAG
Protein Sequence
MREQMCGAAGTTNTYARYQPAPIGIRFYHLYGAVVTSKNGKKRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPSEGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLSLGAPRSPPASMPFNSYTGQLAVSVQDTAASQWTEEEYARSGGSVSPRYCSAASTPHAAPAAYPHPQHYPAPPTSLFNTTSLSLGPYHPANMNGHLSSDRHYNAYNTKDSGHYRMGGLVSSPFSVNPFSLPTCSAQQYAQTAPLASK*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00036409;
90% Identity
-
80% Identity
-