Basic Information

Gene Symbol
jmj2
Assembly
GCA_905332915.1
Location
HG995286.1:27234153-27259511[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.4e-18 4.9e-15 56.8 0.0 16 89 1033 1105 1024 1105 0.87

Sequence Information

Coding Sequence
ATGGCTGACGCATTCGACATTAAAACTGCAATTACCCTGTTGCCGGTAATGAATGGCCAGGAACAGGTTTTGCGTCCACTCAATGAGAAGACCGCAATCAAACGATTCAGCGATGGTTTGACCGACAAGCGGCTCAGGACCATCATTGCTTCACGACAGTTTACGTCGTTGTCTGAAGCTATTACGGCTGCGGTAGATGAACAGTCCATGTCTGTCGCGCCGCAAGACCAGAAATCTACCACTAAGAAAGCAGCTGAGCAACCCAAATTGCAAGTTGGCCGGAATAAAAAAGATTTCAAACGTGTTCATGCAATGTCGTTAAGGTCGCGACGACTGAGTAAACTAGAGTGGAACAAGCTCTTGGCACAAAGCTGTGCGCCATTAAGAAAGACTCCCTCGAAGCGTAAAAAAGCCTCTTCTGACGAGGATGAGCCACTAATTTTCCATAAAACTCGCAAAAAGTCCCCAGCTGTTGCTGCCACTGAGGATAGCCCTTGCGAGAAATCGCCCAAAATGAAATCTTCGAAGGACATTGGCCCTTGCGAGAAATCGCCCAAAGTGAAATCTACGAAGGACTTTGGCCATTGCGAGAAATCGCCCAAAGTGAAATCTTCGAAGGACATTGGCCCTTGCGAGAAATCGCCCAAAGTGAAATCTTCGAAGGACATTGATGTGCCTCGCAAAACCAAAGCAAAAGAAAACAAATCCAAAGAAATCGAAACAAATCCGGGCTCCTCAAAGCTTATCAGAGAGAATAGTGCCAAGAAAAAGAAATGCTCTCCTCAGAAGACGATTCCTAAAGAGTGCTCTCCCAAGAAGCCTGCCATAACCGCCTCTAAAAAACACCTCACGACTGCACGTGACGAACTTGTTAATGAGGCTGCCCTCGATAATGTAGTCACCCGGAATGATTTGGCTATGGCGAATCCGGCAGTAGTCCCAGAAGACCTAGTAGTAGTCACACTTAACCCGAAAGTTGTCCCAGGTATAACGAAAGCAGCCCCAGTGAAGCCGAAATTAGTCTCAATTAAGCCAACAGTAATCCCTGTCAAGCCAAAAGTTATCCCAGTCAAGGCAAAAGTaatcccagtcaaaccggtagCAGTCTCAGATGCTCTGGTTGTAGTCTCAGATACTCCGGTTGGAATCCCAGATGCTCCGGTGATAGTCCCAGATGCTCCGGTGGTAGTCCCAGATGCTCCGGTGGTAGTCCCAGATGCTCCGGTATTCGTCCCATATGCTCCGGTAGTAGACTCAGATGCTCCGGTAGTAGATCCAGATGCTCCGGTAGTAGACGCAGATGCTCCGGTAGTAGTCCCAGATGCTCCGGTTGTAAAACCAAAAGCTCTGGCCCCAAATGCTATGGTTGTACTCCCATATCGTACGGTCTCCTTTGTCCCGTATGCTGAAGTAGAGACAGAAACGCCTGAGCAGAAAGCTGCTTATTTAGCTAGAATGGATGAAGCTCTAATTGGTTTAGATGATTTACCAGATCTAGAAAACTTTTCGGAAGTCGATGATGAGACGACAGTGCGGGTGCAACACGTCGCAGTCCAACCAGCCAACCAGAGCGACATAGCAGACCAAGATCACCCGTGTCCGTCTCTTTCAATGGTACACAATGAAGTACCATTGAAAGAGACGGACACAGTAGACCAAGAACGGTCGAATGGTTATCTAGATTCGGCTCTGGTATACGGTTCGGATACATCTGATGATGAGCCGATGGTGAGAGTTGAAGCGCCGGTCAAACAAGTACATCGACGTACCAACGACTCTCCCGCACCCGGGCCAAGTGGCATGCAGTGCCAATCCAGCAAAAACAATTCTGACGCCAATGAAGAAGACGGAGGCATCAATTTAACGTCGCTCATCAAAAAAATTTTGGcTGGGCCAAGTGGCATGCAGTCCAtattattagaaaacaattctGACATTGATGAAGACAGTGATCAAGGCAAAAGCAACAAAATAAGGACGATCATTAAAAGAATATTGGATTCCGCATCTGTCAATTTGCAGTTAGAAGAATTGGTTAAGGCATCGAAGACTTGCGTCGCGGCAACGTGGCGTACCGAGCAGGACGTCATCAACGCCTCTAAAGAACAAGTAGACTCCCGCTGCAAGGTTTGTAAGCCTTGCCACACATATGAGAAAATATTAAGGGGCAACAGAAATGACCTGGATAGTTCAATTGAGGCTCCAGAGAAGGAACTAAACAGGCAAAATAGTGAAGCAGAATGTAGCGCGATGGGCAACGAGAAACGGACGGTTGCTGCTGATACAGACGATGGCAATGTTCGCTTTAAAGTACCATCAGGAAATTCTAACGTAGCGAAGAAAGTCAGAACTCCCGTTATAAACGCCCAAGCGATCATGGGGATGAACAGCGAGAAAAATGGTGATTCTAAGAAAAACAAGCAGCTTCAAGGTAAGAAACACGAGCTTGGCAAACAAAAAGGTACCcagaattataataaaaacgtaaactcgGATTCTGCGGTGGAGAAGCAAGCCAGCGAAGAAACAGATACCCAGCACATTCAACAAAAAGAGGGTGATGACAGGCCACCTGTGGCGCAAAAGAAAAATCTTGAGGTGGAGATATCTCACATAACTCAACGTTTCGAAGAGCTGCGgaaggaaaaagaaaaagaaattgctCGTCTAAAAATAGAAATTAGGAGCACAGTCAGAGCTGAAATGGAGGCTGATCGCCGTATGATCGAAGAAGTCGATCGGTTGGCGCAGACTCTAGACAAAGAAGAGGATGCCAAAAGTATGCTTCCGAGACAGTTTCCAGATCTAGATGAGCCTGGCACCAGCGGATCCGCAAACGATGGGACACTAGTAGACGCGCCTGTATACTTCCCCACTCTAGAAGAGTTCAATgatccTGTCTCCTTCTTTGAAAAAATTTATCCAGAAGCTATGAAATATGGAGTCTGTAAAGTGGTGCCCCCACCTGGTTGGATGCCACCCTCCGCAGTGCATGGCGACATTAGATTCGACATTATGAATCAGTACATCTCGCGGCTGTTCAGCCGCTGGGGACCGGCCGCGAGGGAGCTGAGTGCCATCAAGTTGTGTCTGTCccaatatactaatattaattttacgcGACCGCCACAATTGGATGGTGTCGAAATAAATTTACCAAAACTATACCACCTTGTGCAACGGCTCGGCGGTCTGGAAACAGTTATCAACAAGAATCGATGGAGCAAGGTCGCAGACGATCTGAAAATTACTAAGGCTGGGAATTATGAGAAAAGATTAGACAATATTTACATGAAGTTTTTGCTAGCATACGACACGCTTTCACATCagGAGCGCCAGGAGATAATGCGGAAAGTTGAGGTATCGtggaacaaaaaaaatcaaaagcttTTGGACCGCGCTATGCACCCGCTATACCGTCAACAAAGAATGCTCGGCTTATTAGACTCTTCAGACGAAGAGACGGAAGATGAAAATATTAAGACTGCTCTCAAGCAGGCAGAAGACTGCATCATCAAAGGACATATCATGCAACACAGTCGATTCAAAAAGGTGGCGACAATGGCGTACGAGAACACGTTTGGGCCGGGTTCGGAGGCGGCTTCCCCGCCTTCACTGGATCACATCGAGGAGATGTACTGGCGCCTCGTCACCTCGGGCACGGAGCACGTGTGCGTACACACTGCGGCCATCGACACCGGCTTGGAGGGCCACGGTTTCACGACCACCGAGGAGCCGTATGCCAGCCATCCGTGGAACCCCAAGCAAGTCATCAACAATCCTCGCAACATACTTCGCTATTTGGGTCCGGTGGTGGGCGTTACGGTGCCCACTCTGCTTCTGGGCATGTTGTTCTCGACCTCGTGCTGGCACAAAGATCCACATGGAGTAGCGTGGTATGAGTACCAGAGTAAGGGACCCACAAGAATTTGGTACGGGATCCCCGCGGACCAGGCGGACAACTTCAGGAAGGCTGTAGAAACGTTAAGCCCGACGTCTTGCCAGAACAAGGCCCTGTGGCTGTCGTCTGAAATCGCGATGATCCCGCCAAGTGCCCTGCGCGAACACAACGTGCGTCTGACGCGCGTGACGCAGAACGAGGGCGAGTTCATCATGGCTTTTCCTAACGCCTACACCAGCTGCATCAGCACCGGCTACACCGAGTCCGAGAGCGTGTACTTGGCGTCATCGCATTGGCTCGATTACATGTGGAACGCTTTCAAGGTAGCACGTGACAGTTGCGAGCCGACGATGTTCTCAATGGAGCAGCTGCTCTACAACATAGGCCGAGACAAGGACGCCGATCCGGACTTAGTGAGACGCGCGCTGCCGATGTATGACTTGGTGTTGCGCGAAGAGGTCACCAACCGACAGATGCTGCAGGAAAGAGGAATTCCTTTCGTGCAGCAGCTACTGAGCGCTCAGGGTGAGCAACAGTCGAGCACCGACAGCGCGCGCCCTCTAGAAGAGTGCGATTACTGCAGGTCCTCGCTGTTCCTGTCTAAGGTGAAGGGGCTGCTCGCACGGAACTCGGTGATGTGCCTGGAGCACGCGCTGGCGCTGCTGGACTCGGATAAGATAAAGGACTTGGACGAGCGGCAGGTGCAGCTGCTGGTGCTGGTCAGCGTCAAGGAGCTGCACAAGGTGCACGACGACATGCGGCGCCGGCAGAACACCAAGTCTTAA
Protein Sequence
MADAFDIKTAITLLPVMNGQEQVLRPLNEKTAIKRFSDGLTDKRLRTIIASRQFTSLSEAITAAVDEQSMSVAPQDQKSTTKKAAEQPKLQVGRNKKDFKRVHAMSLRSRRLSKLEWNKLLAQSCAPLRKTPSKRKKASSDEDEPLIFHKTRKKSPAVAATEDSPCEKSPKMKSSKDIGPCEKSPKVKSTKDFGHCEKSPKVKSSKDIGPCEKSPKVKSSKDIDVPRKTKAKENKSKEIETNPGSSKLIRENSAKKKKCSPQKTIPKECSPKKPAITASKKHLTTARDELVNEAALDNVVTRNDLAMANPAVVPEDLVVVTLNPKVVPGITKAAPVKPKLVSIKPTVIPVKPKVIPVKAKVIPVKPVAVSDALVVVSDTPVGIPDAPVIVPDAPVVVPDAPVVVPDAPVFVPYAPVVDSDAPVVDPDAPVVDADAPVVVPDAPVVKPKALAPNAMVVLPYRTVSFVPYAEVETETPEQKAAYLARMDEALIGLDDLPDLENFSEVDDETTVRVQHVAVQPANQSDIADQDHPCPSLSMVHNEVPLKETDTVDQERSNGYLDSALVYGSDTSDDEPMVRVEAPVKQVHRRTNDSPAPGPSGMQCQSSKNNSDANEEDGGINLTSLIKKILAGPSGMQSILLENNSDIDEDSDQGKSNKIRTIIKRILDSASVNLQLEELVKASKTCVAATWRTEQDVINASKEQVDSRCKVCKPCHTYEKILRGNRNDLDSSIEAPEKELNRQNSEAECSAMGNEKRTVAADTDDGNVRFKVPSGNSNVAKKVRTPVINAQAIMGMNSEKNGDSKKNKQLQGKKHELGKQKGTQNYNKNVNSDSAVEKQASEETDTQHIQQKEGDDRPPVAQKKNLEVEISHITQRFEELRKEKEKEIARLKIEIRSTVRAEMEADRRMIEEVDRLAQTLDKEEDAKSMLPRQFPDLDEPGTSGSANDGTLVDAPVYFPTLEEFNDPVSFFEKIYPEAMKYGVCKVVPPPGWMPPSAVHGDIRFDIMNQYISRLFSRWGPAARELSAIKLCLSQYTNINFTRPPQLDGVEINLPKLYHLVQRLGGLETVINKNRWSKVADDLKITKAGNYEKRLDNIYMKFLLAYDTLSHQERQEIMRKVEVSWNKKNQKLLDRAMHPLYRQQRMLGLLDSSDEETEDENIKTALKQAEDCIIKGHIMQHSRFKKVATMAYENTFGPGSEAASPPSLDHIEEMYWRLVTSGTEHVCVHTAAIDTGLEGHGFTTTEEPYASHPWNPKQVINNPRNILRYLGPVVGVTVPTLLLGMLFSTSCWHKDPHGVAWYEYQSKGPTRIWYGIPADQADNFRKAVETLSPTSCQNKALWLSSEIAMIPPSALREHNVRLTRVTQNEGEFIMAFPNAYTSCISTGYTESESVYLASSHWLDYMWNAFKVARDSCEPTMFSMEQLLYNIGRDKDADPDLVRRALPMYDLVLREEVTNRQMLQERGIPFVQQLLSAQGEQQSSTDSARPLEECDYCRSSLFLSKVKGLLARNSVMCLEHALALLDSDKIKDLDERQVQLLVLVSVKELHKVHDDMRRRQNTKS*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-