Hgla003469.1
Basic Information
- Insect
- Hebomoia glaucippe
- Gene Symbol
- nfxl1
- Assembly
- GCA_025727935.1
- Location
- JAOSYY010000016.1:33453-35924[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 1 2.1e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 19 0.81 1.7e+04 -3.8 1.1 9 12 161 164 160 164 0.70 3 19 0.0072 1.5e+02 2.7 0.7 4 10 169 175 168 175 0.97 4 19 1.5e-07 0.0033 17.7 15.9 3 19 186 202 185 202 0.95 5 19 0.74 1.6e+04 -3.7 0.8 6 10 227 231 226 232 0.54 6 19 2.2e-07 0.0047 17.2 17.3 4 19 240 255 237 255 0.94 7 19 1.4e-06 0.03 14.6 8.6 1 19 290 308 290 308 0.99 8 19 1.2e-06 0.025 14.8 16.5 3 19 345 361 337 361 0.86 9 19 0.62 1.3e+04 -3.4 0.4 7 11 365 369 365 369 0.84 10 19 9.3e-07 0.02 15.2 14.5 1 18 395 412 395 413 0.97 11 19 1.2e-08 0.00025 21.2 16.9 1 19 422 440 422 440 0.99 12 19 9.6e-05 2 8.7 6.4 9 19 488 498 486 498 0.90 13 19 0.0082 1.8e+02 2.6 7.2 4 12 510 518 508 518 0.90 14 19 0.16 3.3e+03 -1.5 3.5 14 18 547 551 547 552 0.87 15 19 0.00051 11 6.4 6.0 1 11 588 598 582 599 0.91 16 19 0.82 1.8e+04 -3.8 1.6 15 18 613 616 613 617 0.87 17 19 0.0012 25 5.3 15.5 4 18 630 645 628 646 0.83 18 19 1.5e-07 0.0031 17.7 11.4 1 16 687 701 687 707 0.87 19 19 0.42 9e+03 -2.9 0.8 5 10 736 741 736 741 0.88
Sequence Information
- Coding Sequence
- ATGGCACGCCGATATCGCGATGCGGCTGCAAAGCTGCAGCAGAATGTGCAGAAGCATTTAAAAGAAATGAAAGATCTTTCTTCTTCTGAAGACGAGGAACCCTTTGACCCTGGAGTTTTAGAAGGTGTTTTCCAAAGCTACTGGCGTGGCGGCGGCGATTCGAACTCTATTAACAGGACGAGGAATCTTCTAGAAGAAGCACTAAGCGGCCGGTCTATCACTTGCCTGATCTGCATAGGATCGATAAAAAAGGCCGACGCGATCTGGACGTGCTGCCACTGCCACTCTTACTTTCATCTGTCTTGTATCCAGAAATGGTCGAACGATAGCATAAGTTTGCGATTAGAGGAACCTCGAGCACCTGTCGCAGTGATCAAGCCGAACAAAATAGAATGGTGCTGTCCCAAGTGTAGAACGGCGTATAGTAAAGAGGAGATCCCGCGTAAATATCGCTGCTTTTGCGGAAAGACCGACGACCCACCGTGTCACCCGTGGCTTGTCCCGCACACGTGTGGGGAAGTATGCGGGCAAAGACTCTCATCGAGTGATAATTGTAAACATAAGTGTTTGTTATTGTGTCACCCCGGGCCTTGCCCTCCGTGCCCCCAGACAATTAATGGAGTCTGTTACTGTGGTAAAGAGAAGAAGCGTGTTCGATGTAGTGCTGGCGTGTGGTCTTGTGGCGAGCCCTGTAAGAAGTTGCTGCCTTGCAAGTGCCACAAGTGTGAGGACATATGTCATGAAGGAGATTGTCCTCCCTGCAGTTACAAAAGTATCCAATCTTGTCTCTGTGGGTCTGAAAAAGTTATTCGTCCTTGCAGTGATCTTGTGTGGCGGTGTGCTACAATCTGCAATAAACCGTATTCATGTGGCTTTCATAATTGTTTGGACATATGTCATTCTAATTCATGCGGTTCTTGTCCTAATTCTGGTCTAAGGAGTTGTCCTTGTGGTGCTAATCAGCGTTATGTTCAATGTCCAGATACAATAGAAACGTGCCTCGGGACTTGCGGAAAAAAGCAGGTCGATTGTGAACATAATTGTCCAGAAAAATGCCACAGGGGTTCATGCCCGCCGTGTCAAGTTCTGATTGAGAAGAAATGCCACTGTTCTACACACACAAGATCTTTGCCGTGCAGCAAAGATTTCAGATGTGATACAAAATGCAGAGGCACTAGACCATGTGGAAAACATGCCTGTGCCCGTAAATGTTGCAACGGCAACTGTCCAGCCTGTGAGAAGACTTGCGACAAGCCCTTGCAATGTGGACGTCACAAGTGTACCACAATTTGTCATCATGGACCCTGCTATCCGTGTCCTAGAGAATCAAAGATCACATGCCGCTGCAAGGAGACATTCATTGTGGTTCCTTGCGGCAGAGAAAAGTATGCTAAACCACCAAAATGCAACCTGCCATGTAAAATCAAGTATAAATGCAGACACATTGATGAAAACAAACACTCGTGCCATTTCGGCGATTGCCCTCCTTGTAGTGCTGTATGCAATAAAACATATAAAAAATGTGATCATAGATGCAAGGCCAAGTGCCATGAATTTGTAACGGTTGTGTTTAAACAAGTTGAAAAGCCAGCAACACCTTGGGAAGTGCAGCCTCCTAAAACTAAAGTAGTAGCATTAGACTGTCCACCCTGTGAGACTCCTGTACCCGTCATCTGTTTCGGAGAACATGATACAGAGCACCAGCCCTGCTACACGGCGTCACGTCGTTGTTGTGGTCGGGAATGTGGAAAGGAACTGGCTTGTACCAATCACAAGTGTTCACTGCTATGTCACCTATACTCACCAGATTCTGATTACCCAAATGTGCCTTCCGTGTGCAGACCTTGCAACATAGAGTGTTCTACCCCACGTCCAGACAGATGCGTACACAAATGTCCCGCACGTGGCTGTCACCCTGGGGCATGCCCACCTTGTGGGGTAATGGACAGATTTAAATGCCATTGTGGTGTTACAGAATTATATTTGAGGTGTTGTGACCTATCCACAGCCTCCGATGACTTATTTAGTTGCAAGCAACAGTGCTCAAGGAATTTAGAGTGTGGGCATCGGTGCAAAAGTATATGCCATAGAGGCCCATGTGGAGAGAATCAAGTTTGCTTAAAAAAGACAAAAATATACTGCCCTTGCGGCAATTTGAAGAAAGAAGCGCCATGTGATTTAGTCAGAAAATCTGAAGTTGTAATCAATTGTGAGGACACATGTGAAAATAAGAAATTGGCTCTGAAATTAGATAAAGAAAGGGAAGAAAAGAGACTGAAGGAATTAGAGGAAGAGAAGAATCGCAGGGAACTGGAAGAGTATCAATGGAAATTGAGTGGCAAGAAGAGAAAATACAAGGAGAAGAAAATCATTATCAATCAAGATAATAAAAATTTTATTCAAAAATACTGGATTCCTATTTTGACTAGCTTAATTGCAATTCTTTCGGGAATTTTGTACAATTATTTATGA
- Protein Sequence
- MARRYRDAAAKLQQNVQKHLKEMKDLSSSEDEEPFDPGVLEGVFQSYWRGGGDSNSINRTRNLLEEALSGRSITCLICIGSIKKADAIWTCCHCHSYFHLSCIQKWSNDSISLRLEEPRAPVAVIKPNKIEWCCPKCRTAYSKEEIPRKYRCFCGKTDDPPCHPWLVPHTCGEVCGQRLSSSDNCKHKCLLLCHPGPCPPCPQTINGVCYCGKEKKRVRCSAGVWSCGEPCKKLLPCKCHKCEDICHEGDCPPCSYKSIQSCLCGSEKVIRPCSDLVWRCATICNKPYSCGFHNCLDICHSNSCGSCPNSGLRSCPCGANQRYVQCPDTIETCLGTCGKKQVDCEHNCPEKCHRGSCPPCQVLIEKKCHCSTHTRSLPCSKDFRCDTKCRGTRPCGKHACARKCCNGNCPACEKTCDKPLQCGRHKCTTICHHGPCYPCPRESKITCRCKETFIVVPCGREKYAKPPKCNLPCKIKYKCRHIDENKHSCHFGDCPPCSAVCNKTYKKCDHRCKAKCHEFVTVVFKQVEKPATPWEVQPPKTKVVALDCPPCETPVPVICFGEHDTEHQPCYTASRRCCGRECGKELACTNHKCSLLCHLYSPDSDYPNVPSVCRPCNIECSTPRPDRCVHKCPARGCHPGACPPCGVMDRFKCHCGVTELYLRCCDLSTASDDLFSCKQQCSRNLECGHRCKSICHRGPCGENQVCLKKTKIYCPCGNLKKEAPCDLVRKSEVVINCEDTCENKKLALKLDKEREEKRLKELEEEKNRRELEEYQWKLSGKKRKYKEKKIIINQDNKNFIQKYWIPILTSLIAILSGILYNYL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -