Basic Information

Insect: Hebomoia glaucippe
Gene Symbol: -
Assembly: GCA_025727935.1
Location: JAOSYY010000001.1:12642087-12647767[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 5.7e-05 0.0039 17.8 2.5 2 23 517 539 516 539 0.95

2 7 0.027 1.9 9.4 0.6 3 14 556 567 555 577 0.70

3 7 0.0012 0.082 13.6 4.8 1 23 584 606 584 606 0.97

4 7 0.00052 0.036 14.8 4.3 1 23 621 642 621 642 0.97

5 7 4.8e-06 0.00033 21.2 0.5 1 23 648 670 648 670 0.99

6 7 6.8e-06 0.00047 20.7 1.0 2 23 677 698 676 698 0.97

7 7 1.8e-06 0.00013 22.5 0.4 1 21 704 724 704 725 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	5.7e-05	0.0039	17.8	2.5	2	23	517	539	516	539	0.95
2	7	0.027	1.9	9.4	0.6	3	14	556	567	555	577	0.70
3	7	0.0012	0.082	13.6	4.8	1	23	584	606	584	606	0.97
4	7	0.00052	0.036	14.8	4.3	1	23	621	642	621	642	0.97
5	7	4.8e-06	0.00033	21.2	0.5	1	23	648	670	648	670	0.99
6	7	6.8e-06	0.00047	20.7	1.0	2	23	677	698	676	698	0.97
7	7	1.8e-06	0.00013	22.5	0.4	1	21	704	724	704	725	0.95

Sequence Information

Coding Sequence: ATGGAAGGCATTTGTAGAAGTTGTTTGGTAAAATGTAATGATGCCTCAGAAATGTTAAAGTATTCTGAGAAAAACAGAAGGCTATTTTTGTATTCAACAGGAATACAGGTTAAACGTGATGATGTTTTTGTTTTTCAACTCTGCCGAGACTGCCATTTAAATATGAAGGTGGCATGTAAATTTAAGAAATCATGTAGATTATCAGAGAGAAAATTTAAAAGTTATTTATGTTCAAAGGAATTGGATGCAAACATTGATTTTAGCATATTTGCGAATAGGACTGATGATTCAGTAAACTTAAGATTACCAAAAAGCCATAATGATATATCATATATTAATAAAACTAAAGAAGATGACAATGTGTCAACGAGTACAAGTATAAGAAATTTCTTAAAAGATATACTGCAAGGTGACGAGATTCCAGATAGTGAGGCTCGAATTATCAATGAAGTAATCCAAGAGGAGGCAGATTTATCAGACGATTCTCTTGATACACACTGGCTTCAAGATGATGTATCAATGGTTACTGATTTTAGATTTGATTTTTGCTTGAGCCCATTTTCAACAACACATTCAATCTCAAATGATCATTGTTATACTCTACCAGTAGAATATCAGAATAATACAAATTATGAAAATAAAAGAAAACTCACGGACAATAATGACATTCAAAGTGTAAATATTTCTAATGTTAAAGAAAAACCAAATATTACAATTGATAATAATGAAGAAATAAATAGTATCCATGTTTTAAATATTAGAGATGACTCACAAAATATGAGATGTGTTATTGATAAGAACCTAGATAAGGCTTTGCTGGATGAAAGTACTGACAATTTCGCTCTTGATGAACTACTTGCTACACCTCCAATGATTTCAAACTCTTGGACGCCGTCAACACCAACAATAAATAACATATTATTTGGCGATAAACTAGACAGTCATAAAAGACCAGGTCAAAATATAGAGAAATATGAAGAAGTTCGTGGTACTGTTGATGTTTTGGATGAATTCCTCACATTCAAAGATTCTAATGACTTAGTACCAAAAGCGAACATTTTAGATAATAAAACGAATTCCGATTTAATAATAGGAGAATCTTCCCAGAAACTTTGGTTGGATGAATCCAATGAACACAGTAGTAATATTTCACTAAGTGGAAACAGTAGTAGTAATGAGCAAGTATTTGTACCACATGCGACTAAACACGTAGAAATTAAAGACACAAATCAGAAAATTATAATAAAAATCATAAGAAAACAAGAAAAAGATCATGGAAATAATGAAGCTGTTAAAGATAATATTACTAATGGTACTCCTGAACCGCTATTATTTGTAAAATATTCCAAAATTGAAGATCAAATAAATAAACTTGTACAAGGTATAGATAATACGGAAACAGAATGTAGCAATAATTTAGATTTATGTAATTTTAAGGATGAATCAAATTTTAAATCGGAAGATATAAATGGTGTAGTCACAAAAGATCGAGACATTATTAAACAACCTCTATCTCCTATTGAGAATAACTACTGTTTAGAAACAATTTCTTGTAAATTATGCGAAAGGACATTTAAAAAGGCACAGAATCTTAAAACGCATATGACGAAGAAACATCGGATAACAATAAAAACTCCTTATATACGAAGTCATGTAAAACGAATTTGCAACTACTGTGGAAAAGAATTTACTTCAAGTATTTCTAGGTTTTTGAAACATATACAAAATCATGAGAAGCCTGTTACATCGCACATCTGTAAAGTATGCCATTTAACCTTCAATACAAAAGCACGTTTAACTATGCATCAGAACTCTCATACTGGGAACCAAGTTAAGAAACCTGTATCCATACGTAAGAAACACATGTGCGAGCACTGTGGTGGTTCGTTTACTTTGTCAAACTACAAGATACATATGAGAAGACACACGAAGGAGTACGCTTTCAAATGTGTGGAGTGCGACGCGGGGTTTTACAGGAAAACTGACCTAACACTACATATAAGAACGCACACAGGCGAGCGACCTCTGACGTGCAACTACTGTTCTAGAGCGTTTAAGAGACGCGATGTTCTGAATATACATATCAGACGCCACACGGGTGAGAGGCCGTTCAAATGTACCATCTGCGATAAAGCGTTTATAACCTCTGTAAATTTGAGGACACATCAAAGTCGAGCGAAGGAGTGCCTGATGATGCAAGAGAAAATAGCTTTTCCCGATAAAATGCAACAATGGGTCACAATTGATTGA
Protein Sequence: MEGICRSCLVKCNDASEMLKYSEKNRRLFLYSTGIQVKRDDVFVFQLCRDCHLNMKVACKFKKSCRLSERKFKSYLCSKELDANIDFSIFANRTDDSVNLRLPKSHNDISYINKTKEDDNVSTSTSIRNFLKDILQGDEIPDSEARIINEVIQEEADLSDDSLDTHWLQDDVSMVTDFRFDFCLSPFSTTHSISNDHCYTLPVEYQNNTNYENKRKLTDNNDIQSVNISNVKEKPNITIDNNEEINSIHVLNIRDDSQNMRCVIDKNLDKALLDESTDNFALDELLATPPMISNSWTPSTPTINNILFGDKLDSHKRPGQNIEKYEEVRGTVDVLDEFLTFKDSNDLVPKANILDNKTNSDLIIGESSQKLWLDESNEHSSNISLSGNSSSNEQVFVPHATKHVEIKDTNQKIIIKIIRKQEKDHGNNEAVKDNITNGTPEPLLFVKYSKIEDQINKLVQGIDNTETECSNNLDLCNFKDESNFKSEDINGVVTKDRDIIKQPLSPIENNYCLETISCKLCERTFKKAQNLKTHMTKKHRITIKTPYIRSHVKRICNYCGKEFTSSISRFLKHIQNHEKPVTSHICKVCHLTFNTKARLTMHQNSHTGNQVKKPVSIRKKHMCEHCGGSFTLSNYKIHMRRHTKEYAFKCVECDAGFYRKTDLTLHIRTHTGERPLTCNYCSRAFKRRDVLNIHIRRHTGERPFKCTICDKAFITSVNLRTHQSRAKECLMMQEKIAFPDKMQQWVTID

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -