Basic Information

Insect: Hebomoia glaucippe
Gene Symbol: -
Assembly: GCA_025727935.1
Location: JAOSYY010000004.1:3896154-3906054[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0024 0.17 12.7 0.2 2 23 424 445 423 445 0.97

2 10 5.3e-06 0.00037 21.0 1.1 1 23 451 473 451 473 0.99

3 10 2.3e-05 0.0016 19.0 8.0 1 23 480 502 480 502 0.98

4 10 8.7e-06 0.0006 20.4 0.1 1 23 508 530 508 530 0.93

5 10 4.4e-06 0.00031 21.3 0.1 1 23 536 558 536 558 0.96

6 10 8.2e-06 0.00057 20.4 2.0 1 23 564 587 564 587 0.96

7 10 0.00057 0.039 14.6 6.3 1 23 593 616 593 616 0.96

8 10 0.00011 0.0078 16.9 0.5 2 23 623 644 622 644 0.97

9 10 8e-05 0.0055 17.3 0.4 1 23 650 672 650 672 0.97

10 10 0.0046 0.32 11.8 0.6 1 23 678 702 678 702 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0024	0.17	12.7	0.2	2	23	424	445	423	445	0.97
2	10	5.3e-06	0.00037	21.0	1.1	1	23	451	473	451	473	0.99
3	10	2.3e-05	0.0016	19.0	8.0	1	23	480	502	480	502	0.98
4	10	8.7e-06	0.0006	20.4	0.1	1	23	508	530	508	530	0.93
5	10	4.4e-06	0.00031	21.3	0.1	1	23	536	558	536	558	0.96
6	10	8.2e-06	0.00057	20.4	2.0	1	23	564	587	564	587	0.96
7	10	0.00057	0.039	14.6	6.3	1	23	593	616	593	616	0.96
8	10	0.00011	0.0078	16.9	0.5	2	23	623	644	622	644	0.97
9	10	8e-05	0.0055	17.3	0.4	1	23	650	672	650	672	0.97
10	10	0.0046	0.32	11.8	0.6	1	23	678	702	678	702	0.92

Sequence Information

Coding Sequence: ATGGCACAGAATTGCTATATTTGCAATAAACAAGATGGTGGAGTCGAGAAAACTAAACCTAACATATTTGAAACTAAGACTCCCATGTCTATGAAGAAAGTTTGTGAGATATTACATGAAATATCTGGTACAGTCGTAAGAGATGAATGTAAAGGAAACAATAACCTATGTGCAAAGTGCTACAAAGCTTTGCTTGAATATGACTATTTACTTGCAAGATTAAATGAAATGAAAGCAGATATACGAGACAGTATCATCAGATCTGAAGATGTTCGTATAGCACAGGAAAAATTGAAAAAGGAATTTTCAAATGAAACAAAGGATATCCTTGATGAAAATTTAAAGAAAAAAGTGAAGTTAGTGCTCCCTGCATCCAAGTTACAACCTTTGCCTCCCGGTTTTGATCTGAAATTGAGCACTTGTAACAATATGGCCCATAATAAAACAGTTCAAATGCCAAAAGTTACTTTGTCGCAGTTATTACAAACTCCGACAATGACAACATCGCAAAACAATATAAAAGAAGAATTCACAGCAGAAGTACCAATCATTTTATCCAATGACATCACTTCACTTTTGAATAAGAAAGAGTTCAGCCTAAGCGATTTTGTAGTTGTGGAAGAATCTGGTAAAGATGAAGAAAATAATGATGATAGACCGATGGAAATTGATGAAGATGCGGTCATAATGGAAGCAGAAAATGGTATAATAAGTGTTGTGTCGCGACAAAAATTTTTATATGGCAACTCTGAGATATCGCTGGTAATGCCACATGGGGTTGCTATCGACCAACATGATGATGGACAGGATTCAAATTCTGAATCGCATATAGAGTTGCAAGTATCTGGTGATGAAGAGACCGCTAATGCTATTATCGCTGCCGCTAATGAACAAGGTGGTACATTCATAAAGGTGGAGACCGGAGAAATGTACGAGGTGAAGTCTATTGAGAGCAAAATACAAAACGACTACAAGAAAACTGAAGATTCATTACGGCCAGACGACAATATGGTGGAACTTGTTGGCGACAAATTCAAATGTCTGTTTTGCGAGAGGAGTAATAAAACAGGACAGTCAGAACCCATTTTGGGTAAAGCTGAATGGATGATGGATCATTTGAAGAATGTTCATTCGGCGAGGCTATATATTTGCAATTGCGGTGCCATTATACGAAAAAGGGTTGATTATTCCGCTCATCTAGAACAACACGCAGATAAATTAAAAAGCCTTATAAGTCCTCAAGCTGCAGAGAAATTAAGTAAACTAATGGAATGTGGAGTGTGTAAGAAGAAATTTAGTTCGCGACTAGTTCTGGCCGGGCACATGAACATGCATACTGGGGCGCGGCCGTACACGTGCGCTCTCTGCGACAAGTCGTTTGCATCGCGCTACACGCAGCAGGCACATATGAAGACACACTCGGAACGACCACGTCCCTACAAATGTAACGAATGCGGCAAATCGTTTTTCACACATCACAATTTAAATCATCATGAGAAAATACATTCTGGAAACAAAGATTTTGTTTGCAACGTCTGCGGTAAAGCATTCGGTACTCAACATAACTTGGAAGTGCACGGTGTGGTACATTCGGGGCTGAAACCGTTTCTTTGTTCAATCTGTGGCAAGGGCTTCGCGAGACGTGCTGAAGTCAGAGATCACATGAGGATACATACGGGTGAGCGTCCATTCGAGTGCGAGACGTGTGGCGCTCGTTTCTCCCAACGTTCTAACTTGCACTCGCACAGGCGCGCGACACACCTCAACGACAAACGTCACCATTGTCCTCAATGCTCCAAGAAGTTCAAGCGGCGACGTTTACTAGAATACCATATAAAATCGTCTCACACGGGTGAGAGACCTCTGAAATGTGAAGTTTGCGCCGCAACCTTCGTGTACCCCGAACATTACAAGAAGCATATCAGAATTCACAGTGGAGAGAAACCGTTTGTGTGCGAGGTGTGCGGAAAAGGATTCAACTCGCGTGACAACCGCAACGTGCACCGATTCGTACACAGCGACCGCAAACCGTATGAATGTCTGCTCTGCGGCGCAGGCTACATGCGAAAACATCTGCTCTACCAGCATATGAACTCAACGGGTCATCTATCCGAATCCATAGTGGTGAATCAGCCGCGTGTCAGCCAGTTAGAAGATGAGGAATTGAAAATTCAATCGGTAATAATAAGCGAGGATGGTAAAACTGAGAAACATCTCTTGGATACGGTGTACGAGTCTGAAGAATTGCAGGTTTTGGGAACTGACGAAAAAGTCGATCAAACTCAAGGTGCCAACGCAACAACCCAATATATTTTATCTACAGGTATGAAAATTCTAAATAAAAACTTTGAGAACTCCGAGCAAATAGAGGGCGCTGTTCTCGAAAACATTACCGCGGAGCAACTAGAGCAGGCTCACCTGCTGAGCGATGGGAACGGAACTGTTCGTCTTATTCAAATACAACTTGCCGATGGTGGCTGCGGGTGGGTGGCAGTCAGTCAGTAG
Protein Sequence: MAQNCYICNKQDGGVEKTKPNIFETKTPMSMKKVCEILHEISGTVVRDECKGNNNLCAKCYKALLEYDYLLARLNEMKADIRDSIIRSEDVRIAQEKLKKEFSNETKDILDENLKKKVKLVLPASKLQPLPPGFDLKLSTCNNMAHNKTVQMPKVTLSQLLQTPTMTTSQNNIKEEFTAEVPIILSNDITSLLNKKEFSLSDFVVVEESGKDEENNDDRPMEIDEDAVIMEAENGIISVVSRQKFLYGNSEISLVMPHGVAIDQHDDGQDSNSESHIELQVSGDEETANAIIAAANEQGGTFIKVETGEMYEVKSIESKIQNDYKKTEDSLRPDDNMVELVGDKFKCLFCERSNKTGQSEPILGKAEWMMDHLKNVHSARLYICNCGAIIRKRVDYSAHLEQHADKLKSLISPQAAEKLSKLMECGVCKKKFSSRLVLAGHMNMHTGARPYTCALCDKSFASRYTQQAHMKTHSERPRPYKCNECGKSFFTHHNLNHHEKIHSGNKDFVCNVCGKAFGTQHNLEVHGVVHSGLKPFLCSICGKGFARRAEVRDHMRIHTGERPFECETCGARFSQRSNLHSHRRATHLNDKRHHCPQCSKKFKRRRLLEYHIKSSHTGERPLKCEVCAATFVYPEHYKKHIRIHSGEKPFVCEVCGKGFNSRDNRNVHRFVHSDRKPYECLLCGAGYMRKHLLYQHMNSTGHLSESIVVNQPRVSQLEDEELKIQSVIISEDGKTEKHLLDTVYESEELQVLGTDEKVDQTQGANATTQYILSTGMKILNKNFENSEQIEGAVLENITAEQLEQAHLLSDGNGTVRLIQIQLADGGCGWVAVSQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -