Basic Information

Insect: Hebomoia glaucippe
Gene Symbol: -
Assembly: GCA_025727935.1
Location: JAOSYY010000015.1:2250457-2258832[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.24 17 6.4 0.8 1 20 2 22 2 24 0.89

2 12 0.4 28 5.7 0.0 2 21 30 49 29 50 0.94

3 12 0.16 11 7.0 0.6 1 12 194 205 194 214 0.81

4 12 2.1e-05 0.0014 19.2 1.2 1 23 363 385 363 385 0.99

5 12 1.8e-05 0.0013 19.4 1.4 1 23 400 422 400 422 0.98

6 12 3.8e-05 0.0026 18.3 0.5 2 23 471 492 470 492 0.97

7 12 0.00063 0.044 14.5 2.0 1 23 509 531 509 531 0.98

8 12 1.2e-06 8.5e-05 23.0 4.5 1 23 537 559 537 559 0.98

9 12 0.00037 0.026 15.2 5.1 1 23 565 587 565 587 0.98

10 12 1.7e-06 0.00011 22.6 0.4 1 23 593 615 593 615 0.98

11 12 0.00021 0.014 16.0 0.1 1 23 619 641 619 641 0.98

12 12 3.5e-05 0.0024 18.5 0.1 1 23 649 672 649 672 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.24	17	6.4	0.8	1	20	2	22	2	24	0.89
2	12	0.4	28	5.7	0.0	2	21	30	49	29	50	0.94
3	12	0.16	11	7.0	0.6	1	12	194	205	194	214	0.81
4	12	2.1e-05	0.0014	19.2	1.2	1	23	363	385	363	385	0.99
5	12	1.8e-05	0.0013	19.4	1.4	1	23	400	422	400	422	0.98
6	12	3.8e-05	0.0026	18.3	0.5	2	23	471	492	470	492	0.97
7	12	0.00063	0.044	14.5	2.0	1	23	509	531	509	531	0.98
8	12	1.2e-06	8.5e-05	23.0	4.5	1	23	537	559	537	559	0.98
9	12	0.00037	0.026	15.2	5.1	1	23	565	587	565	587	0.98
10	12	1.7e-06	0.00011	22.6	0.4	1	23	593	615	593	615	0.98
11	12	0.00021	0.014	16.0	0.1	1	23	619	641	619	641	0.98
12	12	3.5e-05	0.0024	18.5	0.1	1	23	649	672	649	672	0.97

Sequence Information

Coding Sequence: ATGTTCTCGTGTCCTCTTTGTTGCACTACAACCTTTAATTCTAAAGAATTACTCATTGACCATTTGACACAAATCACAAAAAATGTTGTGTGTTCAATATGTAAAGCCGGTACTTCTTCGATAGATGATCTTATTGAACATCTTAAATTCAATTGTATAGAAACCATAGTTTTTTGTGAAGAAGATAGTCAAAATCAGGTTATACAGCAATCAGAGTATCATATAGAATTAACAAATAATGATATGCTACAAGAGAATTGTAATAATAATGGTTCTGTAGTTACAGAACATATATTAGAAGATAATCATGTGAATTCATTATATTCAGATATATTGAGCAAACAACATGTACAAGAGTTGAAGCTTGTAAAGGAATGTGGTGACAGATATGTACTTATAGATAGTAATGATGCTGTGGTATCAAAACAAAATGAAGATGGCACTGTGTCTTTCACTATAGAAGAATCCAGAACAACAGAAACCTTAGAGATTGATCAAATAAATGAGTATAGTACTAAAGTTGAAACAGAAAATGCTGATGTTATAGACGATGTTGAGGAAAGTCAACAGGAAGAGATATACAGCTGCAACACATGTGGCGTGACCTTTACCTCTGTAATTGACCACATTCAAACATTTCACAATGATCAAGATGTGGTGGTAGAGGAACCAATAGATGCAGCTGCCTTATCGGAAGAATATCAGCAGTTAAATGAGAAAGCAGGAGAAGACAGACAGATGGCACGTCGAATGATAACAGATACTGGAGATATTGTTGAGGAACCACTGCAACAAACTGTTAAAAGAGATCAAGAAGTTGTCAATAAACAGGATAACCTAAAACCATTAAAGACCAAGAGACGGTATATAAAAATCGGAAAGGTTACTGAGAGTGTTATTAATAACAACATAAAAAATGCTCTCGAAGAATCTAATGGTTCATACCATAATGTGGCGATGAAAATTATTGAAGCACCGAACGGAAATAAGGTTAAAGTGTATAGTTGTGTTTTATGTAATTTCCTGGTTTCTTCGCTGGCCGAGTTCAAACAACATCCATGTAATACCCGAGCTAGTGCTGCAAAATATAAATGCAGCGTATGTTCAATCAGCTACGATAACGCAAAGTCATTGTGTGCACATATGAAAGTGCATAAAGAAAAACCAGATCCAAATTTGGCAAGTGCGCCACCTAAATTTGAATGTGAAATATGTAGTACGAGGTTTCCGACAAGTAAATCGTTAAAACTGCACAAGCGTATGCATGATCCAATCAAGCCGCGTCCCATCCAGCCGCCAGTGGAAACATCACAGGTCGCAGATAAATTTCTTTGTGGCGTGTGCTTGAAAGTTATACCGTTGCATTATCGCGCCGTACATCAGAACTCACACAAGGGGTCCGGTGAGCTAACTTGCGATTTGTGCAACAAGAAGTTTCCAACACGGGAGTACCTCGACATGCACATGAATGTACATAATATGTATAAGGTAGCAGTAGAGAAACAAGAAAACGACTCATTGCCCTACCAGTGTCTTTATTGTGAAAGGAAGTTCGCGCGACCTCATGAGAAGGTTAAACATGAAAGAATACACACAGGCGAAAAACCCCACTCCTGCGAAATCTGTGGCAAATCGTTCCGCGTGTCGTACTGTCTTACGCTGCACATGCGCACTCACACCGGTGCAAGACCTTACGAGTGCCCACATTGCCCTAAAAGGTTTAAGGCGCATAGTGTGTATAATCACCATATCCTGACGCATTCGGAGGTGCGCGCGTACAAGTGCCCGTATTGCCCCAAAGCGTTCAAGACATCAGTACAACTCGCCGGTCACAAAAACTCGCACACAAAACCATTTTCTTGTCAACAGTGTAATAGGCCTTTCGCGTCTTTGTACGCGGTGCGCGTTCACATGGAGGTGCACGGAAGGCAGAACAGCCTAAAGTTCAAGTGCACCGAATGCGGCGCCAGCTACGCTCGCGCTTTCGCGCTGAAGGACCACGTGCGACAAGCACATTCGCACCTCGAGCCAGCCGTGCCCGATAACACTGCCAATTCGAAAGGTGACCAATGGAAGACAAAAGATATACATGACTCTGTAGAAATTGAAACTCGTAACAAGGAATCACCTAGTGATATGAATGAAATAGGAATCAGTTCAGAAGAACTTATTATATCTTAG
Protein Sequence: MFSCPLCCTTTFNSKELLIDHLTQITKNVVCSICKAGTSSIDDLIEHLKFNCIETIVFCEEDSQNQVIQQSEYHIELTNNDMLQENCNNNGSVVTEHILEDNHVNSLYSDILSKQHVQELKLVKECGDRYVLIDSNDAVVSKQNEDGTVSFTIEESRTTETLEIDQINEYSTKVETENADVIDDVEESQQEEIYSCNTCGVTFTSVIDHIQTFHNDQDVVVEEPIDAAALSEEYQQLNEKAGEDRQMARRMITDTGDIVEEPLQQTVKRDQEVVNKQDNLKPLKTKRRYIKIGKVTESVINNNIKNALEESNGSYHNVAMKIIEAPNGNKVKVYSCVLCNFLVSSLAEFKQHPCNTRASAAKYKCSVCSISYDNAKSLCAHMKVHKEKPDPNLASAPPKFECEICSTRFPTSKSLKLHKRMHDPIKPRPIQPPVETSQVADKFLCGVCLKVIPLHYRAVHQNSHKGSGELTCDLCNKKFPTREYLDMHMNVHNMYKVAVEKQENDSLPYQCLYCERKFARPHEKVKHERIHTGEKPHSCEICGKSFRVSYCLTLHMRTHTGARPYECPHCPKRFKAHSVYNHHILTHSEVRAYKCPYCPKAFKTSVQLAGHKNSHTKPFSCQQCNRPFASLYAVRVHMEVHGRQNSLKFKCTECGASYARAFALKDHVRQAHSHLEPAVPDNTANSKGDQWKTKDIHDSVEIETRNKESPSDMNEIGISSEELIIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -