Basic Information

Insect: Hebomoia glaucippe
Gene Symbol: -
Assembly: GCA_025727935.1
Location: JAOSYY010014977.1:7313-15546[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.033 2.3 9.1 0.1 2 20 167 185 166 188 0.94

2 12 0.53 37 5.3 0.6 1 23 228 251 228 251 0.95

3 12 0.31 21 6.1 1.1 2 19 258 275 257 278 0.92

4 12 0.029 2 9.3 0.7 2 21 353 372 353 373 0.92

5 12 0.00021 0.014 16.0 1.9 1 23 381 404 381 404 0.97

6 12 3.9e-06 0.00027 21.4 2.8 1 23 421 443 421 443 0.99

7 12 1.2e-06 8.6e-05 23.0 5.5 1 23 450 472 450 472 0.98

8 12 3.2e-07 2.2e-05 24.9 1.7 3 23 483 503 481 503 0.96

9 12 2.4e-05 0.0016 19.0 3.2 1 23 509 531 509 531 0.99

10 12 8.6e-07 6e-05 23.5 1.6 2 23 538 559 537 559 0.96

11 12 3.4e-07 2.3e-05 24.8 1.0 1 23 565 587 565 587 0.99

12 12 0.00024 0.016 15.8 0.4 1 23 593 615 593 615 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.033	2.3	9.1	0.1	2	20	167	185	166	188	0.94
2	12	0.53	37	5.3	0.6	1	23	228	251	228	251	0.95
3	12	0.31	21	6.1	1.1	2	19	258	275	257	278	0.92
4	12	0.029	2	9.3	0.7	2	21	353	372	353	373	0.92
5	12	0.00021	0.014	16.0	1.9	1	23	381	404	381	404	0.97
6	12	3.9e-06	0.00027	21.4	2.8	1	23	421	443	421	443	0.99
7	12	1.2e-06	8.6e-05	23.0	5.5	1	23	450	472	450	472	0.98
8	12	3.2e-07	2.2e-05	24.9	1.7	3	23	483	503	481	503	0.96
9	12	2.4e-05	0.0016	19.0	3.2	1	23	509	531	509	531	0.99
10	12	8.6e-07	6e-05	23.5	1.6	2	23	538	559	537	559	0.96
11	12	3.4e-07	2.3e-05	24.8	1.0	1	23	565	587	565	587	0.99
12	12	0.00024	0.016	15.8	0.4	1	23	593	615	593	615	0.98

Sequence Information

Coding Sequence: ATGGTTTCGACAACGGTAAAAGTCGAGGAACTATGTCGAACTTGTCTTACGAAGGAGATCGATTTGGTTTCTGTTTACGAAGTTTATTCCGGAACTGTTACAATAGAAAGCATACTTTCTACTCTTACAGGACTAAAGATAGAAATTGGGGATGGCCTTCCTACAACAGTGTGCTATATATGTAAGGAGAAAGCAACAAATGCATATGACTTCAGACAACGATCTATTCAAGCTGACAGTACGCTGCGGAAAATATATGGGAAGGCAAAAGTGGAAGACTTAGAGACTATAGATCATTGTGTAAAATCAGAACAAGATGGATCTGAAGGAAGAGATGACTATTTGGAATTTGGGTTGGACTTCGGAGGTTCAGATTCTCTTGATGACGTTAAAAATGAAGCAGATGAAAATATAAAAGGAAACAATAATATAACTTCAAATGCTTTATGCAAAAAGACAGATAAAAAATATACAGGACATCCGAAAGATGGTGGTACTTATTGCCCGCTATGCGCGACGAGTTACGGCAATGCTGAGAGCTTAACCAGTCACATGTGGGAGCACCACGCTGACATCATGGGACCCAAGAAAAGAGGACGCCCTAAACGGCTGGGAACAACGGCGATTCTCAATAAGTTATCAGAAAATGGTGTACACGTGAAATGGGTGACTGATATGAAATTTGATTGCAATTTTTGTTCTGACCAATTCAGATCAAAAGACGATCAAGACGCGCATGTCTTGACTAGCCATAATGACTTGAAGTTAGTTAGCTGCTTGCTTTGCAAAAAATATTATGTTAAACAAGAAGATTTCGAGAAACACAATTGTATTTATGACAAGAAAGATAGTGATAAAACAGAGGATACCGACGGTTCTGATAATGTTAACAAAAATACATTGATTGGGGAAGTTTTGCTGCAAGAAGTTATATCCCAAGTTCCTGATACGGAGTGCGTATCTGATATATGTGTATGCGAATGTTGCGGTTGCGTTTGCGCCGGGCAGGAACACCTCGCGCGTCACAAGGACGATGAGCATCCAGAACTCTCGCCGCGTTGTCATCTCTGCTACAAGGTGTTCGCGTCTCTGAAGTCGGCCGCGCGACACCGTTCGACGTGTAAGCAGCGCGAGCGCACATTCACTTGCACGACGTGCGGGTCGCGGTTTGCGCACGAGGTGACCCTGAACAAGCATATTTTGCGCACGCACCGCGGGCAAACCGTCAGCGTGCGTTTCGCTCCCGACCGGACCAGCTCCTATCGTTGCGATATCTGCTCCACCAGGTTCTGTAGGAAAGATCTTCTCGCGAGACATTTGAAAGTCCACAAACCTAGTGACAAAGTGTTCGAGTGCGACACTTGTAAGAAGAAATTCCATAGGAGAAGTAACCTCAGGACGCACATGAGAGTGCATGAAGGCGGTGGCAGCACTAGCGCCTGCCTCTGCCTGTACTGCGGCCGCGGTTTCTCCAACTCGTCAAACCTCATCGTGCATATGCGTAGACACACCGGAGAGAAGCCGTACAAGTGCGACTTTTGCGGAAAAGGTTTCCCGCGCTCTTCAGATCTTCAGTGCCATAGACGTTCCCACACAGGAGAGAAGCCATGCATTTGCGGTGTTTGTGGAAAAGGGTTCTCCCGAAGCAATAAGTTGTCCCGTCATATGCGCGTGCACACTGGAGTCAAGCCTTATAAGTGTGTTTACTGCGATAAGGCTTTCTCTCAGAGCAACGATCTCACGCTTCACGTCCGCCGACACACCGGCGACAAACCTTACGTATGCGAACTGTGCGGCGAACGGTTCATACAGGGAACGGCACTGCACAACCACAGGCGCGCCCATGGACACTACTCGGAGCCACCGGTCGCGTACCCTGCGCCCACAGTCGCACCGCCCCCTGCACCCCCGCTCTGA
Protein Sequence: MVSTTVKVEELCRTCLTKEIDLVSVYEVYSGTVTIESILSTLTGLKIEIGDGLPTTVCYICKEKATNAYDFRQRSIQADSTLRKIYGKAKVEDLETIDHCVKSEQDGSEGRDDYLEFGLDFGGSDSLDDVKNEADENIKGNNNITSNALCKKTDKKYTGHPKDGGTYCPLCATSYGNAESLTSHMWEHHADIMGPKKRGRPKRLGTTAILNKLSENGVHVKWVTDMKFDCNFCSDQFRSKDDQDAHVLTSHNDLKLVSCLLCKKYYVKQEDFEKHNCIYDKKDSDKTEDTDGSDNVNKNTLIGEVLLQEVISQVPDTECVSDICVCECCGCVCAGQEHLARHKDDEHPELSPRCHLCYKVFASLKSAARHRSTCKQRERTFTCTTCGSRFAHEVTLNKHILRTHRGQTVSVRFAPDRTSSYRCDICSTRFCRKDLLARHLKVHKPSDKVFECDTCKKKFHRRSNLRTHMRVHEGGGSTSACLCLYCGRGFSNSSNLIVHMRRHTGEKPYKCDFCGKGFPRSSDLQCHRRSHTGEKPCICGVCGKGFSRSNKLSRHMRVHTGVKPYKCVYCDKAFSQSNDLTLHVRRHTGDKPYVCELCGERFIQGTALHNHRRAHGHYSEPPVAYPAPTVAPPPAPPL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00115155;
90% Identity: -
80% Identity: -