Hgla006420.1
Basic Information
- Insect
- Hebomoia glaucippe
- Gene Symbol
- -
- Assembly
- GCA_025727935.1
- Location
- JAOSYY010011029.1:9043-16139[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 28 0.25 17 6.3 1.9 1 12 194 205 194 214 0.90 2 28 0.00084 0.058 14.1 0.5 2 20 255 273 254 275 0.93 3 28 7.7e-05 0.0053 17.4 0.8 3 23 302 323 300 323 0.96 4 28 0.00037 0.025 15.2 0.6 1 23 374 396 374 396 0.98 5 28 0.037 2.6 8.9 0.6 1 23 414 436 414 436 0.96 6 28 2.6e-05 0.0018 18.8 0.7 1 23 475 498 475 498 0.96 7 28 0.00015 0.011 16.4 2.0 2 23 542 564 542 564 0.97 8 28 1.9 1.3e+02 3.5 0.5 7 23 621 638 614 638 0.85 9 28 0.0017 0.12 13.1 0.3 1 23 693 715 693 715 0.98 10 28 0.0063 0.44 11.4 5.3 2 23 727 748 726 748 0.96 11 28 0.0081 0.56 11.0 1.0 2 23 760 781 759 781 0.96 12 28 0.0048 0.33 11.7 0.4 1 23 791 813 791 813 0.98 13 28 0.0011 0.074 13.8 1.6 1 23 842 864 842 864 0.97 14 28 0.00033 0.023 15.4 3.9 1 23 875 897 875 897 0.98 15 28 0.00063 0.044 14.5 4.6 1 23 905 927 905 927 0.97 16 28 0.00058 0.04 14.6 0.2 2 23 947 969 946 969 0.97 17 28 0.41 29 5.6 0.9 1 23 987 1009 987 1009 0.95 18 28 3.3 2.3e+02 2.8 3.7 1 23 1016 1038 1016 1038 0.91 19 28 0.3 20 6.1 2.2 2 23 1049 1071 1048 1071 0.93 20 28 0.0028 0.19 12.5 0.2 2 23 1094 1115 1093 1115 0.95 21 28 9.8 6.8e+02 1.3 5.5 2 23 1158 1180 1157 1180 0.93 22 28 0.0015 0.11 13.3 0.3 2 23 1196 1217 1195 1217 0.95 23 28 0.065 4.5 8.2 2.1 5 23 1227 1245 1224 1245 0.95 24 28 0.0018 0.12 13.1 0.6 2 23 1256 1278 1255 1278 0.95 25 28 0.12 8.1 7.4 3.1 2 23 1295 1313 1295 1313 0.93 26 28 0.48 34 5.4 0.7 2 23 1385 1406 1384 1406 0.93 27 28 0.01 0.72 10.7 0.5 2 23 1417 1439 1416 1439 0.96 28 28 0.98 68 4.5 3.6 2 20 1477 1495 1476 1497 0.93
Sequence Information
- Coding Sequence
- ATGGCACTCAAGCTGGGTAAATGCAGGCTTTGCCTCAAGCTTGGGGACTTTTACTCCATCTTTACGTTGGACAACAATTTACAACTTGCCGAGATGGTTATGGAGTGTGCCCGAGTTAAAATCCAAGAAGGTGATGGACTTCCCGACAAAATTTGCAGCGAGTGTATTCAGAAATTGAGTAGCGCACATATTTTCAAACAACAATGTGAGAGGTCGGATCAAGAACTTCGTCGCAATTATGTTCCTCCGCCAGGCTTTGCAGCTGTTACACCACCACTAGTAGTTAGACAGAGCAGTGACTCTGCCTTCTCCACTCAAACGGATGCTTCGAAACCGTTGTCAAGTGACAACATAAGTACCCCGATTAAAAGAGTTCGCAAAAAGAGTAGCGAGAGTATTGACGATGTGTCTAATAGCAGCCAATCTCGTGAATACCCGATTGTTACTTCCAAACGTGTCCAAGAACTTCGAAAGGCTCCAAAAAGAAAGAAATTCCACGATGATAACTCCGATTCGGACTTCGATGAAAATAATATCTCACCGTATTCTGGCGGTACCTCTTCTGATGAAGCTCTCGAGTTCAAATGTGATATATGTTCGAAAGCATTCAAAACATACTTGAGTATGTCTTGCCATAAAAAATGTCATTATCGCAAAGACAGACAATATCAACTGGCTCTTGCGAACAAAACTCCATCTCCAAGCCCTAAGCCGCAGTCCCTTCCACATTCGGCTGATGCTCACGATGCTGAAAATAAATTGCGATGTGAAAAGTGTGGAAAAACATTCAAGTTAAATATAATGTTTAAGAGACACAGGGAAGTTTGTGGAAATATTATTGACAAAGAACTTAAGATATCATTAGAACCAATCGACACAGTGCTCACTGAGAAGAAACTTGACTGTGAAATGTGTACAACAAAATTTAAAACAGTGGAGACCTTAAAAAAGCATATGAGAGTTATACATGGAATGGTTCTAGAAAAACATCACTTCGCATCCCAGGTGCAGAATGGTACGACGAGTGTTCCGTGCTTCTTCTGTCAAAAGCCATTTGATGAATTTTATTCGCATTCAGCTCATTTCAAGGTCTGTCCGAACAGAGATGATTCTGTGACATATGTATGCACAGTGTGCAGTAAGCCATTCGCAAAAAAAGCAAGTTACTTCTCACATTTGAAGGCTCATTTTGGTCCCTTAGTTAAGATAAAGAGCGATTCGTCTCCTCCGCTCCAAAGCTATACTTGCCGCTTCTGTAAGAAGAATTTGCAAAATGAAGAATCACTAATAAAACACTTGGCTGCACACATGTCTAACGTGGAAGAGCCAAACGAAGGCGGCGATGAAGAATCTTGGAGTACCATGGATGACTCTGCGTCAGTACATTCCGAGTATAATAACTCTTCAGTAACAACGGGTCCGTTCCAATGTCCGATATGTGAAAGAGGCTTTAAATATAAGAAAGCTCTAGAAACTCATCAAACCGTAAAACATCCAAATGTGACCATCAAATTTGAACCACCGGATAAAGATGGTTCTCCCGAGTTCTTGGTTGAAACAATGACTGATGAAAACGAGAATCAGTCTGATTCAGAATCAAGCGCTGGAGAGGACGACGACAATACTTGTGATATTTGTGAAAAACAATTTTCATACAAACGTCTTCTAATCAATCACAAGAGAACTAAACATAACATGAGCTCAGGAACTAAACGGGCTAAGATCAGTTTGAAAGAGTGCGCAGTGCGATGCCTGATCTGCGACTTAGAAATGAAAGTGAGCGATATCAATGAACACAATCAAAAACATAAATTGGAAAACATGAAACCGCACAATTTGTATACTTGTGGGGCTTGTATGGATCAACACTTTAATAGTTGCAGTGCGCTCGCTAACCACATAAAACTTGTGCATAGATTAAACCAACCTGAAGTCAAACAAACAAATAACATTGCCGGTGTACCGGATTTGGCGGATTTTTGTGAGGTCGTTGTGACGAAGGCGGAACCCCTGGAGAATGTAGTCCAGAGTCACAACGACAGTCGAGAGGCTTCCGCCTACGCGACAGGCAATGGATTCACTTGTCCAACTTGCAGCAAAGAGATGCCCTCTCTAGTATCTCTAAAACGCCACATGAACTGGCATACAAATGTCGGCAACAATATAGAAAAAAGTCTAGAGTGTTTCGTTTGTAAAGAGACGTTCCGATTCCAGTGTCACTATAAAATTCATATGAGAGCTCATTATGACGATACCAACCTTGATCCGAAACATCTGACGTGTCCGATCTGTAACAGAAGGAGTAAACACCTTCGAGCCGCACAGGCGCACATGAACTACCACAAACAGACTCGCTTCAAGACAAAGGACTACGAGTGTGCCATCTGCAAGAAAGTCTTTCAATACAGAAAAGTTTACCTCTCACACATGGCAATACATTTTAAACGCGGGGAGTCTGCAAACAATACCGTGATCGGAACAGATTTACCAAAGACCGCCGATAAAAATGCATATGACGGAACGCACACTTGCGGCATATGTGGTAAAGTGTGCGATTCGGAAGCATCATTAAAATACCATACAAATTGGCACAAATCAAAGACACTCCTGTTTGCGGTGCGACATAAATGCGACATGTGCAACCTACAATTCACCAACAAGATCCAGCTGAAAATTCACAAGCGCTCACATTTCGAAGACGAGAACGGCCCATTCAAGTGCCACATTTGCCATAAAGGTTTTACTGCAGAGGATTATTTCCGCAGGCACGTCAAAGGGCATAACTTCGATCGTCAGTCGCACAAGAAACGTATAGAAAAGCTCAGGAAGGATAAAGTCAAGTGTCCTATATGCACGAGATACTATCCAGATTTGGTGAAGCTGATCCGACATCTGCGGCGCACCCATCCCGAGAGCAAAATGATAAAAGAAGATCCAGACGCCCCGCAGCAAGTGTATTACCCGTGCAAGCTGTGCGCCAAAGTGTTCCTCGACGAGAGAAGACTGCAACACCACGAGGAATCTCACCTGCGAAAGCCTGAAGTTTTCAAGTGCAAATTCTGCGGGAAGAAAGCGATGTCTCTGAAACTGCATCGCCTCCACATCAAGAGCCATTTGACTCAGAAGTATCTGAATAAACCGCTCAATTGTCAACATTGTGATGAGACGTTCCTGCGAGGGTACGACCTCCACTACCATTTACGGGACGTCCACAACATCGAAGAAACCTGGATCGCCGATAGGAACAGCCAAGGCCTAATCGGTCCGCTGAAGGATCTCCAATGCTCCATCTGTTACAAAATTCTTGCCAGCAAAGGGAACTACGAAAGACACATCGACTATCACAATTCACTGCGCTGCAACTACTGTTTTGATTATTTCAGTTCGCTGAGATTCTTGGAAGGGCATTTGGCTTACAGTTGTGAAAAGAAGAAATTGATCGGCGACACGGAGATCTATCCGAAAAAAGTGAAGTGCCATATCTGTTACAAAGCTTTCCATATTCAAGTGAAGTTGGATTGTCATCTACGAACCCAGCACGGAATCAAGTCGCTAAAAGAAGCAACGGAAAGTAAAAAAGAAATAGTTTGCGACTACTGTTTTAGAGTGTTTGAGAATGAATATGCGTTGACGACACATAAGCTATACCACAGGACGGTTGGATATTACGGATGCATCTATTGTAGTAAAAAATTTAGCACTATGACAGCGTACAGGAAACATAAGAATCGCCACTTAACACAAATGAATGTGGACAACCCGTCCAAATGCGAACATTGCGATGAAACTTTCGTTGCGTTCCGGGAGTTAATTTATCACATGCGAGACGCACACGGCGACGACAAGGAGTGGATCGTGTACCCGAAAGAGTCTATTGAAGAAACCTGTAACATTTGCAATAAAGTTTTCTATAATCTGCATAGACACCTTTCGTATCACGAACAGAATAGGTGCAAAAAATGCGGAGAGTACTTCCTCTCGCGAATCGATTTTGACAATCACATCTGTCACATCGACAGCGACGATGATGTCGAAGACAAAGCCGAAGATGATATTCGTCCGAAGTACGAGGAATGCCGGTTCTGCTTCAAGCCCATCACCGACAAAACTAAGAAGAAACACGATATCATTCACAAAGGGTCAGGTTCTATATCGTGTCGATTTTGTACTCTTAAATTTAAAACTATTGACGCTTTCAACATCCACGCATTTTCACATCGCAGCCGAAAGTACACGAAACATCCAATCCGGTGTCGCATTTGTCGCGAGCAATTTGTTAAGTACGGTCCGTTCATGCGTCACATGAGATCAGAGCACAAATCTAACAAGAAGATGCACTACAGGACCACTATTAAGCCCGAGAAATGTGTGGTGTGTGGTGATGAATTTCCTAATTTACACAACCACTACCGTGCCCACCTTTTGAATCAGTGTCTTCAATGCCGCAAGTACTTCACCTCTTCGAAACTGTTCTCGCAGCACACTTGCGATGAAGAAGACAGTGATCCCAGTAAAGTGTTCACCAGTGATGCAAATCTTCCATGGCTTATAAATACTTATGTTCCTCTGGATGAAAAAGATGATGAAAAGTTATATGGGTATGAAGAGGAGAATGTGGATGATCAATTACCTCTAAACGATGAAAGTCAGAATTCCGGTGACACGGCTGAAAATTCACTTCATGCAATGGTTTATGCTCCAATTATATCTGATGTGTTATCGCTGTATGAGAAAAAGGAAGAAGTCAGTACAGAAGAAAACAAGGAAGATGATGTCGTCGAACTGATCGATGAAGATTCGATCGGTTTCCAAAATCATGTGACAGTGATCACCATTGATGATGATTGA
- Protein Sequence
- MALKLGKCRLCLKLGDFYSIFTLDNNLQLAEMVMECARVKIQEGDGLPDKICSECIQKLSSAHIFKQQCERSDQELRRNYVPPPGFAAVTPPLVVRQSSDSAFSTQTDASKPLSSDNISTPIKRVRKKSSESIDDVSNSSQSREYPIVTSKRVQELRKAPKRKKFHDDNSDSDFDENNISPYSGGTSSDEALEFKCDICSKAFKTYLSMSCHKKCHYRKDRQYQLALANKTPSPSPKPQSLPHSADAHDAENKLRCEKCGKTFKLNIMFKRHREVCGNIIDKELKISLEPIDTVLTEKKLDCEMCTTKFKTVETLKKHMRVIHGMVLEKHHFASQVQNGTTSVPCFFCQKPFDEFYSHSAHFKVCPNRDDSVTYVCTVCSKPFAKKASYFSHLKAHFGPLVKIKSDSSPPLQSYTCRFCKKNLQNEESLIKHLAAHMSNVEEPNEGGDEESWSTMDDSASVHSEYNNSSVTTGPFQCPICERGFKYKKALETHQTVKHPNVTIKFEPPDKDGSPEFLVETMTDENENQSDSESSAGEDDDNTCDICEKQFSYKRLLINHKRTKHNMSSGTKRAKISLKECAVRCLICDLEMKVSDINEHNQKHKLENMKPHNLYTCGACMDQHFNSCSALANHIKLVHRLNQPEVKQTNNIAGVPDLADFCEVVVTKAEPLENVVQSHNDSREASAYATGNGFTCPTCSKEMPSLVSLKRHMNWHTNVGNNIEKSLECFVCKETFRFQCHYKIHMRAHYDDTNLDPKHLTCPICNRRSKHLRAAQAHMNYHKQTRFKTKDYECAICKKVFQYRKVYLSHMAIHFKRGESANNTVIGTDLPKTADKNAYDGTHTCGICGKVCDSEASLKYHTNWHKSKTLLFAVRHKCDMCNLQFTNKIQLKIHKRSHFEDENGPFKCHICHKGFTAEDYFRRHVKGHNFDRQSHKKRIEKLRKDKVKCPICTRYYPDLVKLIRHLRRTHPESKMIKEDPDAPQQVYYPCKLCAKVFLDERRLQHHEESHLRKPEVFKCKFCGKKAMSLKLHRLHIKSHLTQKYLNKPLNCQHCDETFLRGYDLHYHLRDVHNIEETWIADRNSQGLIGPLKDLQCSICYKILASKGNYERHIDYHNSLRCNYCFDYFSSLRFLEGHLAYSCEKKKLIGDTEIYPKKVKCHICYKAFHIQVKLDCHLRTQHGIKSLKEATESKKEIVCDYCFRVFENEYALTTHKLYHRTVGYYGCIYCSKKFSTMTAYRKHKNRHLTQMNVDNPSKCEHCDETFVAFRELIYHMRDAHGDDKEWIVYPKESIEETCNICNKVFYNLHRHLSYHEQNRCKKCGEYFLSRIDFDNHICHIDSDDDVEDKAEDDIRPKYEECRFCFKPITDKTKKKHDIIHKGSGSISCRFCTLKFKTIDAFNIHAFSHRSRKYTKHPIRCRICREQFVKYGPFMRHMRSEHKSNKKMHYRTTIKPEKCVVCGDEFPNLHNHYRAHLLNQCLQCRKYFTSSKLFSQHTCDEEDSDPSKVFTSDANLPWLINTYVPLDEKDDEKLYGYEEENVDDQLPLNDESQNSGDTAENSLHAMVYAPIISDVLSLYEKKEEVSTEENKEDDVVELIDEDSIGFQNHVTVITIDDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -